RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 TM4SF20Q53R12 229 aa7.89□□□□□ -1.15
RNU4-39P-201ENST00000362455 CRTC3Q6UUV7 619 aa7.89□□□□□ -1.15
RNU4-39P-201ENST00000362455 DAGLBQ8NCG7 672 aa7.89□□□□□ -1.15
RNU4-39P-201ENST00000362455 ENOX1Q8TC92 643 aaKnown RBP7.89□□□□□ -1.15
RNU4-39P-201ENST00000362455 KCTD13Q8WZ19 329 aa7.89□□□□□ -1.15
RNU4-39P-201ENST00000362455 CCDC140Q96MF4 163 aa7.89□□□□□ -1.15
RNU4-39P-201ENST00000362455 SPOCK3Q9BQ16 436 aa7.89□□□□□ -1.15
RNU4-39P-201ENST00000362455 GPR62Q9BZJ7 368 aa7.89□□□□□ -1.15
RNU4-39P-201ENST00000362455 PCDH12Q9NPG4 1184 aa7.89□□□□□ -1.15
RNU4-39P-201ENST00000362455 CYP26B1Q9NR63 512 aa7.89□□□□□ -1.15
RNU4-39P-201ENST00000362455 NOP58Q9Y2X3 529 aaKnown RBP7.89□□□□□ -1.15
RNU4-39P-201ENST00000362455 HECW2Q9P2P5 1572 aa7.88□□□□□ -1.15
RNU4-39P-201ENST00000362455 WDR7Q9Y4E6 1490 aa7.88□□□□□ -1.15
RNU4-39P-201ENST00000362455 CD109Q6YHK3 1445 aa7.88□□□□□ -1.15
RNU4-39P-201ENST00000362455 GSNP06396 782 aa7.88□□□□□ -1.15
RNU4-39P-201ENST00000362455 C6orf222P0C671 652 aaPredicted RBP7.88□□□□□ -1.15
RNU4-39P-201ENST00000362455 SRFP11831 508 aa7.88□□□□□ -1.15
RNU4-39P-201ENST00000362455 OXCT1P55809 520 aa7.88□□□□□ -1.15
RNU4-39P-201ENST00000362455 IGBP1P78318 339 aa7.88□□□□□ -1.15
RNU4-39P-201ENST00000362455 POU4F1Q01851 419 aa7.88□□□□□ -1.15
RNU4-39P-201ENST00000362455 MAP4K2Q12851 820 aa7.88□□□□□ -1.15
RNU4-39P-201ENST00000362455 PRSS53Q2L4Q9 553 aa7.88□□□□□ -1.15
RNU4-39P-201ENST00000362455 CWF19L1Q69YN2 538 aaKnown RBP7.88□□□□□ -1.15
RNU4-39P-201ENST00000362455 FAM181AQ8N9Y4 354 aa7.88□□□□□ -1.15
RNU4-39P-201ENST00000362455 TMEM145Q8NBT3 493 aa7.88□□□□□ -1.15
RNU4-39P-201ENST00000362455 DBNDD2Q9BQY9 259 aa7.88□□□□□ -1.15
RNU4-39P-201ENST00000362455 MCMBPQ9BTE3 642 aa7.88□□□□□ -1.15
RNU4-39P-201ENST00000362455 DUSP15Q9H1R2 295 aaPredicted RBP7.88□□□□□ -1.15
RNU4-39P-201ENST00000362455 SFMBT1Q9UHJ3 866 aa7.88□□□□□ -1.15
RNU4-39P-201ENST00000362455 BLACEA4D250 179 aa7.87□□□□□ -1.15
RNU4-39P-201ENST00000362455 STXBP3O00186 592 aa7.87□□□□□ -1.15
RNU4-39P-201ENST00000362455 SCG5P05408 212 aa7.87□□□□□ -1.15
RNU4-39P-201ENST00000362455 CD3EP07766 207 aa7.87□□□□□ -1.15
RNU4-39P-201ENST00000362455 VIL1P09327 827 aaKnown RBP7.87□□□□□ -1.15
RNU4-39P-201ENST00000362455 ECI1P42126 302 aa7.87□□□□□ -1.15
RNU4-39P-201ENST00000362455 CYP4F3Q08477 520 aa7.87□□□□□ -1.15
RNU4-39P-201ENST00000362455 DOC2BQ14184 412 aa7.87□□□□□ -1.15
RNU4-39P-201ENST00000362455 ARHGAP27Q6ZUM4 889 aa7.87□□□□□ -1.15
RNU4-39P-201ENST00000362455 ZNF655Q8N720 491 aaPredicted RBP7.87□□□□□ -1.15
RNU4-39P-201ENST00000362455 TCTN2Q96GX1 697 aa7.87□□□□□ -1.15
RNU4-39P-201ENST00000362455 C1orf159Q96HA4 380 aa7.87□□□□□ -1.15
RNU4-39P-201ENST00000362455 OSBPL1AQ9BXW6 950 aa7.87□□□□□ -1.15
RNU4-39P-201ENST00000362455 GPATCH2Q9NW75 528 aa7.87□□□□□ -1.15
RNU4-39P-201ENST00000362455 ST14Q9Y5Y6 855 aa7.87□□□□□ -1.15
RNU4-39P-201ENST00000362455 MAP3K4Q9Y6R4 1608 aa7.87□□□□□ -1.15
RNU4-39P-201ENST00000362455 MAGI3Q5TCQ9 1506 aa7.87□□□□□ -1.15
RNU4-39P-201ENST00000362455 TEX14Q8IWB6 1497 aa7.87□□□□□ -1.15
RNU4-39P-201ENST00000362455 WDR64B1ANS9 1081 aa7.86□□□□□ -1.15
RNU4-39P-201ENST00000362455 CPP00450 1065 aa7.86□□□□□ -1.15
RNU4-39P-201ENST00000362455 PROCP04070 461 aa7.86□□□□□ -1.15
RNU4-39P-201ENST00000362455 MYCLP1P12525 358 aaPredicted RBP7.86□□□□□ -1.15
RNU4-39P-201ENST00000362455 ANAPC15P60006 121 aa7.86□□□□□ -1.15
RNU4-39P-201ENST00000362455 SCRN1Q12765 414 aa7.86□□□□□ -1.15
RNU4-39P-201ENST00000362455 NTRK3Q16288 839 aa7.86□□□□□ -1.15
RNU4-39P-201ENST00000362455 NKPD1Q17RQ9 610 aa7.86□□□□□ -1.15
RNU4-39P-201ENST00000362455 TRIM61Q5EBN2 209 aa7.86□□□□□ -1.15
RNU4-39P-201ENST00000362455 SLC35F1Q5T1Q4 408 aa7.86□□□□□ -1.15
RNU4-39P-201ENST00000362455 CDKAL1Q5VV42 579 aa7.86□□□□□ -1.15
RNU4-39P-201ENST00000362455 SPACA3Q8IXA5 215 aa7.86□□□□□ -1.15
RNU4-39P-201ENST00000362455 SLC7A14Q8TBB6 771 aa7.86□□□□□ -1.15
RNU4-39P-201ENST00000362455 SHKBP1Q8TBC3 707 aa7.86□□□□□ -1.15
RNU4-39P-201ENST00000362455 METTL22Q9BUU2 404 aaPredicted RBP7.86□□□□□ -1.15
RNU4-39P-201ENST00000362455 TRIT1Q9H3H1 467 aaKnown RBP7.86□□□□□ -1.15
RNU4-39P-201ENST00000362455 ATG3Q9NT62 314 aa7.86□□□□□ -1.15
RNU4-39P-201ENST00000362455 NDOR1Q9UHB4 597 aa7.86□□□□□ -1.15
RNU4-39P-201ENST00000362455 A0A087X0B3 334 aa7.85□□□□□ -1.15
RNU4-39P-201ENST00000362455 IGLV1-40P01703 118 aa7.85□□□□□ -1.15
RNU4-39P-201ENST00000362455 CEACAM5P06731 702 aa7.85□□□□□ -1.15
RNU4-39P-201ENST00000362455 SDSP20132 328 aa7.85□□□□□ -1.15
RNU4-39P-201ENST00000362455 GABREP78334 506 aa7.85□□□□□ -1.15
RNU4-39P-201ENST00000362455 AMPD3Q01432 767 aa7.85□□□□□ -1.15
RNU4-39P-201ENST00000362455 KRT26Q7Z3Y9 468 aa7.85□□□□□ -1.15
RNU4-39P-201ENST00000362455 TSPYL5Q86VY4 417 aaPredicted RBP7.85□□□□□ -1.15
RNU4-39P-201ENST00000362455 THNSL2Q86YJ6 484 aa7.85□□□□□ -1.15
RNU4-39P-201ENST00000362455 SLC52A2Q9HAB3 445 aa7.85□□□□□ -1.15
RNU4-39P-201ENST00000362455 MKNK2Q9HBH9 465 aa7.85□□□□□ -1.15
RNU4-39P-201ENST00000362455 LRRC4CQ9HCJ2 640 aa7.85□□□□□ -1.15
RNU4-39P-201ENST00000362455 KIAA0556O60303 1618 aa7.85□□□□□ -1.15
RNU4-39P-201ENST00000362455 ZCCHC11Q5TAX3 1644 aaKnown RBP7.85□□□□□ -1.15
RNU4-39P-201ENST00000362455 WASH4PA8MWX3 477 aa7.84□□□□□ -1.15
RNU4-39P-201ENST00000362455 AURKAO14965 403 aa7.84□□□□□ -1.15
RNU4-39P-201ENST00000362455 KCNQ2O43526 872 aa7.84□□□□□ -1.15
RNU4-39P-201ENST00000362455 H2AFB1P0C5Y9 115 aa7.84□□□□□ -1.15
RNU4-39P-201ENST00000362455 H2AFB2P0C5Z0 115 aa7.84□□□□□ -1.15
RNU4-39P-201ENST00000362455 IFNGR1P15260 489 aa7.84□□□□□ -1.15
RNU4-39P-201ENST00000362455 FSTP19883 344 aa7.84□□□□□ -1.15
RNU4-39P-201ENST00000362455 BMP8BP34820 402 aa7.84□□□□□ -1.15
RNU4-39P-201ENST00000362455 DENND5AQ6IQ26 1287 aa7.84□□□□□ -1.15
RNU4-39P-201ENST00000362455 USP53Q70EK8 1073 aa7.84□□□□□ -1.15
RNU4-39P-201ENST00000362455 KREMEN2Q8NCW0 462 aa7.84□□□□□ -1.15
RNU4-39P-201ENST00000362455 GSTCDQ8NEC7 633 aa7.84□□□□□ -1.15
RNU4-39P-201ENST00000362455 COPS5Q92905 334 aa7.84□□□□□ -1.15
RNU4-39P-201ENST00000362455 PTPRN2Q92932 1015 aa7.84□□□□□ -1.15
RNU4-39P-201ENST00000362455 HSPA12BQ96MM6 686 aa7.84□□□□□ -1.15
RNU4-39P-201ENST00000362455 FCRL3Q96P31 734 aaPredicted RBP7.84□□□□□ -1.15
RNU4-39P-201ENST00000362455 SLC12A9Q9BXP2 914 aa7.84□□□□□ -1.15
RNU4-39P-201ENST00000362455 TRIM39Q9HCM9 518 aa7.84□□□□□ -1.15
RNU4-39P-201ENST00000362455 PLAGL2Q9UPG8 496 aa7.84□□□□□ -1.15
RNU4-39P-201ENST00000362455 BACE2Q9Y5Z0 518 aa7.84□□□□□ -1.15
RNU4-39P-201ENST00000362455 ABCA8O94911 1581 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms