RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 ZSCAN26Q16670 478 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 LONRF2Q1L5Z9 754 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 DAAM2Q86T65 1068 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 CELF1Q92879 486 aaKnown RBP18.07■□□□□ 0.48
SCAF1-201ENST00000360565 NAP1L3Q99457 506 aaPredicted RBP18.07■□□□□ 0.48
SCAF1-201ENST00000360565 PDE11AQ9HCR9 933 aa18.07■□□□□ 0.48
SCAF1-201ENST00000360565 KIF4AO95239 1232 aa18.06■□□□□ 0.48
SCAF1-201ENST00000360565 TCP1P17987 556 aaKnown RBP18.06■□□□□ 0.48
SCAF1-201ENST00000360565 GUCY1A2P33402 732 aa18.06■□□□□ 0.48
SCAF1-201ENST00000360565 SLFN13Q68D06 897 aa18.06■□□□□ 0.48
SCAF1-201ENST00000360565 CCDC121Q6ZUS5 278 aa18.06■□□□□ 0.48
SCAF1-201ENST00000360565 DGKHQ86XP1 1220 aa18.06■□□□□ 0.48
SCAF1-201ENST00000360565 MYCLP12524 364 aaPredicted RBP18.06■□□□□ 0.48
SCAF1-201ENST00000360565 PLCG1P19174 1290 aa18.06■□□□□ 0.48
SCAF1-201ENST00000360565 ALDH1B1P30837 517 aa18.06■□□□□ 0.48
SCAF1-201ENST00000360565 GPR101Q96P66 508 aaPredicted RBP18.06■□□□□ 0.48
SCAF1-201ENST00000360565 GAS7O60861 476 aa18.06■□□□□ 0.48
SCAF1-201ENST00000360565 FNBP4Q8N3X1 1017 aaPredicted RBP18.06■□□□□ 0.48
SCAF1-201ENST00000360565 ZNF579Q8NAF0 562 aaKnown RBP18.06■□□□□ 0.48
SCAF1-201ENST00000360565 KIFC2Q96AC6 838 aa18.06■□□□□ 0.48
SCAF1-201ENST00000360565 BPIFA3Q9BQP9 254 aa18.06■□□□□ 0.48
SCAF1-201ENST00000360565 RASSF4Q9H2L5 321 aa18.06■□□□□ 0.48
SCAF1-201ENST00000360565 HOMER2Q9NSB8 354 aa18.06■□□□□ 0.48
SCAF1-201ENST00000360565 C1orf167Q5SNV9 1468 aa18.05■□□□□ 0.48
SCAF1-201ENST00000360565 AGLP35573 1532 aa18.05■□□□□ 0.48
SCAF1-201ENST00000360565 CTDNEP1O95476 244 aa18.05■□□□□ 0.48
SCAF1-201ENST00000360565 PRR29P0C7W0 189 aa18.05■□□□□ 0.48
SCAF1-201ENST00000360565 HARSP12081 509 aaKnown RBP18.05■□□□□ 0.48
SCAF1-201ENST00000360565 SLC16A2P36021 539 aa18.05■□□□□ 0.48
SCAF1-201ENST00000360565 SMTNP53814 917 aa18.05■□□□□ 0.48
SCAF1-201ENST00000360565 ICA1Q05084 483 aa18.05■□□□□ 0.48
SCAF1-201ENST00000360565 PPFIA1Q13136 1202 aa18.05■□□□□ 0.48
SCAF1-201ENST00000360565 NSMFQ6X4W1 530 aa18.05■□□□□ 0.48
SCAF1-201ENST00000360565 CPVLQ9H3G5 476 aa18.05■□□□□ 0.48
SCAF1-201ENST00000360565 NEURL4Q96JN8 1562 aa18.05■□□□□ 0.48
SCAF1-201ENST00000360565 STAT1P42224 750 aa18.05■□□□□ 0.48
SCAF1-201ENST00000360565 ARL6IP4Q66PJ3 421 aaKnown RBP18.05■□□□□ 0.48
SCAF1-201ENST00000360565 LRRC45Q96CN5 670 aa18.05■□□□□ 0.48
SCAF1-201ENST00000360565 PANX2Q96RD6 677 aa18.05■□□□□ 0.48
SCAF1-201ENST00000360565 PPLO60437 1756 aa18.05■□□□□ 0.48
SCAF1-201ENST00000360565 FDPSP14324 419 aaKnown RBP18.05■□□□□ 0.48
SCAF1-201ENST00000360565 CYP2J2P51589 502 aa18.05■□□□□ 0.48
SCAF1-201ENST00000360565 CUL4BQ13620 913 aa18.05■□□□□ 0.48
SCAF1-201ENST00000360565 LARGE2Q8N3Y3 721 aa18.05■□□□□ 0.48
SCAF1-201ENST00000360565 U2AF1L4Q8WU68 220 aaKnown RBP18.05■□□□□ 0.48
SCAF1-201ENST00000360565 FNBP1Q96RU3 617 aa18.05■□□□□ 0.48
SCAF1-201ENST00000360565 PARD6BQ9BYG5 372 aa18.05■□□□□ 0.48
SCAF1-201ENST00000360565 ABCB4P21439 1286 aa18.04■□□□□ 0.48
SCAF1-201ENST00000360565 CCNE1P24864 410 aa18.04■□□□□ 0.48
SCAF1-201ENST00000360565 FBXO11Q86XK2 927 aa18.04■□□□□ 0.48
SCAF1-201ENST00000360565 STMN4Q9H169 189 aaPredicted RBP18.04■□□□□ 0.48
SCAF1-201ENST00000360565 SERPINB13Q9UIV8 391 aa18.04■□□□□ 0.48
SCAF1-201ENST00000360565 STK24Q9Y6E0 443 aa18.04■□□□□ 0.48
SCAF1-201ENST00000360565 IKBKGQ9Y6K9 419 aa18.04■□□□□ 0.48
SCAF1-201ENST00000360565 KCNK3O14649 394 aa18.04■□□□□ 0.48
SCAF1-201ENST00000360565 NEBLO76041 1014 aa18.04■□□□□ 0.48
SCAF1-201ENST00000360565 CYP27A1Q02318 531 aa18.04■□□□□ 0.48
SCAF1-201ENST00000360565 NSRP1Q9H0G5 558 aaKnown RBP18.04■□□□□ 0.48
SCAF1-201ENST00000360565 DISC1Q9NRI5 854 aa18.04■□□□□ 0.48
SCAF1-201ENST00000360565 MYO1AQ9UBC5 1043 aa18.04■□□□□ 0.48
SCAF1-201ENST00000360565 UTP11Q9Y3A2 253 aaKnown RBP18.04■□□□□ 0.48
SCAF1-201ENST00000360565 CPDO75976 1380 aa18.04■□□□□ 0.48
SCAF1-201ENST00000360565 ZMYND10O75800 440 aa18.04■□□□□ 0.48
SCAF1-201ENST00000360565 GUCY2FP51841 1108 aa18.04■□□□□ 0.48
SCAF1-201ENST00000360565 KMT5BQ4FZB7 885 aa18.04■□□□□ 0.48
SCAF1-201ENST00000360565 ASPRV1Q53RT3 343 aa18.04■□□□□ 0.48
SCAF1-201ENST00000360565 KCTD1Q719H9 257 aa18.04■□□□□ 0.48
SCAF1-201ENST00000360565 IPO4Q8TEX9 1081 aaKnown RBP18.04■□□□□ 0.48
SCAF1-201ENST00000360565 DCP1AQ9NPI6 582 aaPredicted RBP18.04■□□□□ 0.48
SCAF1-201ENST00000360565 ANTXR2P58335 489 aa18.04■□□□□ 0.48
SCAF1-201ENST00000360565 GPATCH4Q5T3I0 446 aaKnown RBP18.04■□□□□ 0.48
SCAF1-201ENST00000360565 GJA10Q969M2 543 aa18.04■□□□□ 0.48
SCAF1-201ENST00000360565 ACTN4O43707 911 aaKnown RBP18.03■□□□□ 0.48
SCAF1-201ENST00000360565 MFAP3LO75121 409 aa18.03■□□□□ 0.48
SCAF1-201ENST00000360565 NDUFA10O95299 355 aa18.03■□□□□ 0.48
SCAF1-201ENST00000360565 CACNB1Q02641 598 aaPredicted RBP18.03■□□□□ 0.48
SCAF1-201ENST00000360565 RASSF7Q02833 373 aa18.03■□□□□ 0.48
SCAF1-201ENST00000360565 PABPC4Q13310 644 aaKnown RBP eCLIP18.03■□□□□ 0.488e-10■■□□□ 11.4
SCAF1-201ENST00000360565 CCDC114Q96M63 670 aa18.03■□□□□ 0.48
SCAF1-201ENST00000360565 PREX1Q8TCU6 1659 aa18.03■□□□□ 0.48
SCAF1-201ENST00000360565 SERPINB2P05120 415 aa18.03■□□□□ 0.48
SCAF1-201ENST00000360565 TOGARAM2Q6ZUX3 1019 aa18.03■□□□□ 0.48
SCAF1-201ENST00000360565 SLC44A5Q8NCS7 719 aa18.03■□□□□ 0.48
SCAF1-201ENST00000360565 DEPDC5O75140 1603 aa18.03■□□□□ 0.48
SCAF1-201ENST00000360565 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.03■□□□□ 0.48
SCAF1-201ENST00000360565 ARMCX5Q6P1M9 558 aa18.03■□□□□ 0.48
SCAF1-201ENST00000360565 ANKS4BQ8N8V4 417 aa18.03■□□□□ 0.48
SCAF1-201ENST00000360565 RETREG2Q8NC44 543 aa18.03■□□□□ 0.48
SCAF1-201ENST00000360565 MTA3Q9BTC8 594 aa18.03■□□□□ 0.48
SCAF1-201ENST00000360565 KCNK9Q9NPC2 374 aa18.03■□□□□ 0.48
SCAF1-201ENST00000360565 CCDC151A5D8V7 595 aa18.02■□□□□ 0.48
SCAF1-201ENST00000360565 FKBP3Q00688 224 aaKnown RBP18.02■□□□□ 0.48
SCAF1-201ENST00000360565 TCP11X2Q5H9J9 407 aa18.02■□□□□ 0.48
SCAF1-201ENST00000360565 MSL1Q68DK7 614 aa18.02■□□□□ 0.48
SCAF1-201ENST00000360565 PLA2G12BQ9BX93 195 aa18.02■□□□□ 0.48
SCAF1-201ENST00000360565 CDK8P49336 464 aa18.02■□□□□ 0.48
SCAF1-201ENST00000360565 DLGAP5Q15398 846 aa18.02■□□□□ 0.48
SCAF1-201ENST00000360565 METTL16Q86W50 562 aaKnown RBP18.02■□□□□ 0.48
SCAF1-201ENST00000360565 IGDCC4Q8TDY8 1250 aa18.02■□□□□ 0.48
SCAF1-201ENST00000360565 SMCR8Q8TEV9 937 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms