RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 RRP12Q5JTH9 1297 aaKnown RBP16.32■□□□□ 0.2
TOP3B-201ENST00000357179 KCTD16Q68DU8 428 aa16.32■□□□□ 0.2
TOP3B-201ENST00000357179 SLC4A4Q9Y6R1 1079 aa16.32■□□□□ 0.2
TOP3B-201ENST00000357179 ECM2O94769 699 aaPredicted RBP16.32■□□□□ 0.2
TOP3B-201ENST00000357179 IDEP14735 1019 aa16.32■□□□□ 0.2
TOP3B-201ENST00000357179 PURBQ96QR8 312 aaKnown RBP16.32■□□□□ 0.2
TOP3B-201ENST00000357179 PYM1Q9BRP8 204 aaKnown RBP16.32■□□□□ 0.2
TOP3B-201ENST00000357179 TRMT112Q9UI30 125 aaKnown RBP16.32■□□□□ 0.2
TOP3B-201ENST00000357179 TTC26A0AVF1 554 aa16.32■□□□□ 0.2
TOP3B-201ENST00000357179 APBA1Q02410 837 aa16.32■□□□□ 0.2
TOP3B-201ENST00000357179 GRIK3Q13003 919 aa16.32■□□□□ 0.2
TOP3B-201ENST00000357179 SEC23AQ15436 765 aa16.32■□□□□ 0.2
TOP3B-201ENST00000357179 KIAA1328Q86T90 577 aa16.32■□□□□ 0.2
TOP3B-201ENST00000357179 CCDC114Q96M63 670 aa16.32■□□□□ 0.2
TOP3B-201ENST00000357179 ZKSCAN3Q9BRR0 538 aa16.32■□□□□ 0.2
TOP3B-201ENST00000357179 UBAC1Q9BSL1 405 aa16.32■□□□□ 0.2
TOP3B-201ENST00000357179 JADE2Q9NQC1 790 aa16.32■□□□□ 0.2
TOP3B-201ENST00000357179 TAB2Q9NYJ8 693 aa16.32■□□□□ 0.2
TOP3B-201ENST00000357179 CTNND2Q9UQB3 1225 aa16.32■□□□□ 0.2
TOP3B-201ENST00000357179 PLCH1Q4KWH8 1693 aa16.31■□□□□ 0.2
TOP3B-201ENST00000357179 PRPF3O43395 683 aaKnown RBP16.31■□□□□ 0.2
TOP3B-201ENST00000357179 KRT14P02533 472 aa16.31■□□□□ 0.2
TOP3B-201ENST00000357179 AFMP43652 599 aa16.31■□□□□ 0.2
TOP3B-201ENST00000357179 WDR59Q6PJI9 974 aa16.31■□□□□ 0.2
TOP3B-201ENST00000357179 IQCKQ8N0W5 287 aa16.31■□□□□ 0.2
TOP3B-201ENST00000357179 LCORLQ8N3X6 602 aa16.31■□□□□ 0.2
TOP3B-201ENST00000357179 SYMPKQ92797 1274 aaKnown RBP16.31■□□□□ 0.2
TOP3B-201ENST00000357179 EPSTI1Q96J88 318 aa16.31■□□□□ 0.2
TOP3B-201ENST00000357179 LACRTQ9GZZ8 138 aa16.31■□□□□ 0.2
TOP3B-201ENST00000357179 ANAPC4Q9UJX5 808 aa16.31■□□□□ 0.2
TOP3B-201ENST00000357179 TPX2Q9ULW0 747 aaKnown RBP16.31■□□□□ 0.2
TOP3B-201ENST00000357179 PRKAB2O43741 272 aa16.31■□□□□ 0.2
TOP3B-201ENST00000357179 SEC24CP53992 1094 aa16.31■□□□□ 0.2
TOP3B-201ENST00000357179 TBC1D8BQ0IIM8 1120 aa16.31■□□□□ 0.2
TOP3B-201ENST00000357179 NUP133Q8WUM0 1156 aa16.31■□□□□ 0.2
TOP3B-201ENST00000357179 STIM2Q9P246 746 aa16.31■□□□□ 0.2
TOP3B-201ENST00000357179 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.31■□□□□ 0.2
TOP3B-201ENST00000357179 RCCD1A6NED2 376 aa16.3■□□□□ 0.2
TOP3B-201ENST00000357179 NR1D1P20393 614 aa16.3■□□□□ 0.2
TOP3B-201ENST00000357179 CASP1P29466 404 aa16.3■□□□□ 0.2
TOP3B-201ENST00000357179 MDH1P40925 334 aaKnown RBP16.3■□□□□ 0.2
TOP3B-201ENST00000357179 ZKSCAN8Q15776 578 aaPredicted RBP16.3■□□□□ 0.2
TOP3B-201ENST00000357179 PKN1Q16512 942 aa16.3■□□□□ 0.2
TOP3B-201ENST00000357179 TCP11X2Q5H9J9 407 aa16.3■□□□□ 0.2
TOP3B-201ENST00000357179 CCDC82Q8N4S0 544 aa16.3■□□□□ 0.2
TOP3B-201ENST00000357179 SPATA4Q8NEY3 305 aa16.3■□□□□ 0.2
TOP3B-201ENST00000357179 SNX12Q9UMY4 172 aa16.3■□□□□ 0.2
TOP3B-201ENST00000357179 IQSEC3Q9UPP2 1182 aaPredicted RBP16.3■□□□□ 0.2
TOP3B-201ENST00000357179 ERVV-1B6SEH8 477 aa16.3■□□□□ 0.2
TOP3B-201ENST00000357179 IBSPP21815 317 aaPredicted RBP16.3■□□□□ 0.2
TOP3B-201ENST00000357179 SLC8A1P32418 973 aa16.3■□□□□ 0.2
TOP3B-201ENST00000357179 SLC8A3P57103 927 aa16.3■□□□□ 0.2
TOP3B-201ENST00000357179 PPARAQ07869 468 aa16.3■□□□□ 0.2
TOP3B-201ENST00000357179 CCDC121Q6ZUS5 278 aa16.3■□□□□ 0.2
TOP3B-201ENST00000357179 C1orf131Q8NDD1 294 aaKnown RBP16.3■□□□□ 0.2
TOP3B-201ENST00000357179 ESR2Q92731 530 aa16.3■□□□□ 0.2
TOP3B-201ENST00000357179 SHISA4Q96DD7 197 aa16.3■□□□□ 0.2
TOP3B-201ENST00000357179 RWDD2AQ9UIY3 292 aa16.3■□□□□ 0.2
TOP3B-201ENST00000357179 LUC7L2Q9Y383 392 aaKnown RBP16.3■□□□□ 0.2
TOP3B-201ENST00000357179 MYH6P13533 1939 aa16.3■□□□□ 0.2
TOP3B-201ENST00000357179 ZNF233A6NK53 670 aa16.29■□□□□ 0.2
TOP3B-201ENST00000357179 CLSTN1O94985 981 aa16.29■□□□□ 0.2
TOP3B-201ENST00000357179 INHBEP58166 350 aa16.29■□□□□ 0.2
TOP3B-201ENST00000357179 SLC7A5Q01650 507 aa16.29■□□□□ 0.2
TOP3B-201ENST00000357179 FUT2Q10981 343 aa16.29■□□□□ 0.2
TOP3B-201ENST00000357179 CD302Q8IX05 232 aa16.29■□□□□ 0.2
TOP3B-201ENST00000357179 CMTR1Q8N1G2 835 aaKnown RBP16.29■□□□□ 0.2
TOP3B-201ENST00000357179 ASAP1Q9ULH1 1129 aa16.29■□□□□ 0.2
TOP3B-201ENST00000357179 KCNJ18B7U540 433 aa16.29■□□□□ 0.2
TOP3B-201ENST00000357179 UBXN1Q04323 297 aa16.29■□□□□ 0.2
TOP3B-201ENST00000357179 BIRC2Q13490 618 aa16.29■□□□□ 0.2
TOP3B-201ENST00000357179 KCNJ12Q14500 433 aa16.29■□□□□ 0.2
TOP3B-201ENST00000357179 MEA1Q16626 185 aa16.29■□□□□ 0.2
TOP3B-201ENST00000357179 HAUS3Q68CZ6 603 aa16.29■□□□□ 0.2
TOP3B-201ENST00000357179 MAB21L3Q8N8X9 362 aa16.29■□□□□ 0.2
TOP3B-201ENST00000357179 POLD4Q9HCU8 107 aa16.29■□□□□ 0.2
TOP3B-201ENST00000357179 DISP2A7MBM2 1401 aa16.29■□□□□ 0.2
TOP3B-201ENST00000357179 KLHL33A6NCF5 533 aa16.28■□□□□ 0.2
TOP3B-201ENST00000357179 TNKSO95271 1327 aa16.28■□□□□ 0.2
TOP3B-201ENST00000357179 CCNHP51946 323 aaPredicted RBP16.28■□□□□ 0.2
TOP3B-201ENST00000357179 SARNPP82979 210 aaKnown RBP16.28■□□□□ 0.2
TOP3B-201ENST00000357179 PIGBQ92521 554 aa16.28■□□□□ 0.2
TOP3B-201ENST00000357179 TNFRSF25Q93038 417 aa16.28■□□□□ 0.2
TOP3B-201ENST00000357179 CAPN11Q9UMQ6 739 aa16.28■□□□□ 0.2
TOP3B-201ENST00000357179 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.28■□□□□ 0.2
TOP3B-201ENST00000357179 COBLO75128 1261 aa16.28■□□□□ 0.2
TOP3B-201ENST00000357179 PRLRP16471 622 aa16.28■□□□□ 0.2
TOP3B-201ENST00000357179 ATP2C1P98194 919 aaPredicted RBP16.28■□□□□ 0.2
TOP3B-201ENST00000357179 IFFO1Q0D2I5 559 aa16.28■□□□□ 0.2
TOP3B-201ENST00000357179 RCSD1Q6JBY9 416 aa16.28■□□□□ 0.2
TOP3B-201ENST00000357179 CYFIP2Q96F07 1278 aa16.28■□□□□ 0.2
TOP3B-201ENST00000357179 OSBPL7Q9BZF2 842 aa16.28■□□□□ 0.2
TOP3B-201ENST00000357179 VPS54Q9P1Q0 977 aa16.28■□□□□ 0.2
TOP3B-201ENST00000357179 DNM1LO00429 736 aa16.28■□□□□ 0.2
TOP3B-201ENST00000357179 CYLC1P35663 651 aaPredicted RBP16.28■□□□□ 0.2
TOP3B-201ENST00000357179 TSR1Q2NL82 804 aaKnown RBP16.28■□□□□ 0.2
TOP3B-201ENST00000357179 CFAP58Q5T655 872 aa16.28■□□□□ 0.2
TOP3B-201ENST00000357179 C3orf20Q8ND61 904 aa16.28■□□□□ 0.2
TOP3B-201ENST00000357179 HELBQ8NG08 1087 aaPredicted RBP16.28■□□□□ 0.2
TOP3B-201ENST00000357179 SCLT1Q96NL6 688 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms