RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 RIC8AQ9NPQ8 531 aa16.81■□□□□ 0.28
CXCL12-201ENST00000343575 KCNH4Q9UQ05 1017 aa16.81■□□□□ 0.28
CXCL12-201ENST00000343575 DYNC1I1O14576 645 aa16.8■□□□□ 0.28
CXCL12-201ENST00000343575 CLK2P49760 499 aaKnown RBP16.8■□□□□ 0.28
CXCL12-201ENST00000343575 MOGSQ13724 837 aa16.8■□□□□ 0.28
CXCL12-201ENST00000343575 SF3A1Q15459 793 aaKnown RBP16.8■□□□□ 0.28
CXCL12-201ENST00000343575 ANO1Q5XXA6 986 aa16.8■□□□□ 0.28
CXCL12-201ENST00000343575 CAVIN1Q6NZI2 390 aaKnown RBP16.8■□□□□ 0.28
CXCL12-201ENST00000343575 PPP1R9AQ9ULJ8 1098 aa16.8■□□□□ 0.28
CXCL12-201ENST00000343575 ZKSCAN5Q9Y2L8 839 aa16.8■□□□□ 0.28
CXCL12-201ENST00000343575 PCDHB6Q9Y5E3 794 aa16.8■□□□□ 0.28
CXCL12-201ENST00000343575 A0A0G2JLL6 359 aaPredicted RBP16.8■□□□□ 0.28
CXCL12-201ENST00000343575 EDIL3O43854 480 aa16.8■□□□□ 0.28
CXCL12-201ENST00000343575 FLOT1O75955 427 aa16.8■□□□□ 0.28
CXCL12-201ENST00000343575 GNA11P29992 359 aa16.8■□□□□ 0.28
CXCL12-201ENST00000343575 USH1GQ495M9 461 aa16.8■□□□□ 0.28
CXCL12-201ENST00000343575 RILPL1Q5EBL4 403 aa16.8■□□□□ 0.28
CXCL12-201ENST00000343575 TREML2Q5T2D2 321 aa16.8■□□□□ 0.28
CXCL12-201ENST00000343575 CHADLQ6NUI6 762 aa16.8■□□□□ 0.28
CXCL12-201ENST00000343575 POTEEQ6S8J3 1075 aa16.8■□□□□ 0.28
CXCL12-201ENST00000343575 SAMD1Q6SPF0 538 aaPredicted RBP16.8■□□□□ 0.28
CXCL12-201ENST00000343575 CATSPERGQ6ZRH7 1159 aa16.8■□□□□ 0.28
CXCL12-201ENST00000343575 PRRT2Q7Z6L0 340 aaPredicted RBP16.8■□□□□ 0.28
CXCL12-201ENST00000343575 OPTNQ96CV9 577 aa16.8■□□□□ 0.28
CXCL12-201ENST00000343575 P2RX7Q99572 595 aaKnown RBP16.8■□□□□ 0.28
CXCL12-201ENST00000343575 GBA2Q9HCG7 927 aaPredicted RBP16.8■□□□□ 0.28
CXCL12-201ENST00000343575 TMEM260Q9NX78 707 aa16.8■□□□□ 0.28
CXCL12-201ENST00000343575 ADAMTS5Q9UNA0 930 aa16.8■□□□□ 0.28
CXCL12-201ENST00000343575 CELF2O95319 508 aaKnown RBP16.79■□□□□ 0.28
CXCL12-201ENST00000343575 ADCY7P51828 1080 aa16.79■□□□□ 0.28
CXCL12-201ENST00000343575 PPIL2Q13356 520 aa16.79■□□□□ 0.28
CXCL12-201ENST00000343575 SLC39A14Q15043 492 aa16.79■□□□□ 0.28
CXCL12-201ENST00000343575 CCDC174Q6PII3 467 aa16.79■□□□□ 0.28
CXCL12-201ENST00000343575 LRSAM1Q6UWE0 723 aa16.79■□□□□ 0.28
CXCL12-201ENST00000343575 SLC38A10Q9HBR0 1119 aa16.79■□□□□ 0.28
CXCL12-201ENST00000343575 BIN2Q9UBW5 565 aaPredicted RBP16.79■□□□□ 0.28
CXCL12-201ENST00000343575 LOC285556D6RIA3 1793 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 UNCXA6NJT0 531 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 CXCL11O14625 94 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 MEIS2O14770 477 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 YEATS4O95619 227 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 FKBP1BP68106 108 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 UBE2SQ16763 222 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 REPS2Q8NFH8 660 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 ATG4CQ96DT6 458 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 AGBL1Q96MI9 1066 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 PSTPIP2Q9H939 334 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 TMOD4Q9NZQ9 345 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 USP17L15C9J2P7 530 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 USP17L13C9JLJ4 530 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 USP17L11C9JVI0 530 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 USP17L18D6R9N7 530 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 USP17L22D6RA61 530 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 USP17L17D6RBQ6 530 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 USP17L19D6RCP7 530 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 USP17L20D6RJB6 530 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 VWA5AO00534 786 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 USP17L24Q0WX57 530 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 JAKMIP3Q5VZ66 844 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 USP17L6PQ6QN14 398 aa16.78■□□□□ 0.28
CXCL12-201ENST00000343575 REXO1Q8N1G1 1221 aaKnown RBP16.78■□□□□ 0.28
CXCL12-201ENST00000343575 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.78■□□□□ 0.28
CXCL12-201ENST00000343575 KIF3CO14782 793 aa16.77■□□□□ 0.27
CXCL12-201ENST00000343575 ICAM1P05362 532 aa16.77■□□□□ 0.27
CXCL12-201ENST00000343575 ATP2B1P20020 1258 aa16.77■□□□□ 0.27
CXCL12-201ENST00000343575 DSG3P32926 999 aa16.77■□□□□ 0.27
CXCL12-201ENST00000343575 INF2Q27J81 1249 aa16.77■□□□□ 0.27
CXCL12-201ENST00000343575 TBC1D5Q92609 795 aa16.77■□□□□ 0.27
CXCL12-201ENST00000343575 SLC10A4Q96EP9 437 aa16.77■□□□□ 0.27
CXCL12-201ENST00000343575 RBSNQ9H1K0 784 aa16.77■□□□□ 0.27
CXCL12-201ENST00000343575 UBE2HP62256 183 aa16.76■□□□□ 0.27
CXCL12-201ENST00000343575 COG2Q14746 738 aa16.76■□□□□ 0.27
CXCL12-201ENST00000343575 CUL5Q93034 780 aa16.76■□□□□ 0.27
CXCL12-201ENST00000343575 SYAP1Q96A49 352 aaPredicted RBP16.76■□□□□ 0.27
CXCL12-201ENST00000343575 PCDHA7Q9UN72 937 aa16.76■□□□□ 0.27
CXCL12-201ENST00000343575 MRVI1Q9Y6F6 885 aa16.76■□□□□ 0.27
CXCL12-201ENST00000343575 COL11A1P12107 1806 aaPredicted RBP16.76■□□□□ 0.27
CXCL12-201ENST00000343575 SPDYE16A6NNV3 312 aaPredicted RBP16.76■□□□□ 0.27
CXCL12-201ENST00000343575 SPTLC2O15270 562 aa16.76■□□□□ 0.27
CXCL12-201ENST00000343575 HOXA7P31268 230 aaPredicted RBP16.76■□□□□ 0.27
CXCL12-201ENST00000343575 TRAPPC10P48553 1259 aa16.76■□□□□ 0.27
CXCL12-201ENST00000343575 AXDND1Q5T1B0 1012 aaPredicted RBP16.76■□□□□ 0.27
CXCL12-201ENST00000343575 KRT25Q7Z3Z0 450 aa16.76■□□□□ 0.27
CXCL12-201ENST00000343575 PROCA1Q8NCQ7 364 aaPredicted RBP16.76■□□□□ 0.27
CXCL12-201ENST00000343575 BICD2Q8TD16 824 aa16.76■□□□□ 0.27
CXCL12-201ENST00000343575 RAVER2Q9HCJ3 691 aaKnown RBP16.76■□□□□ 0.27
CXCL12-201ENST00000343575 CCDC194A0A1B0GVG4 234 aa16.75■□□□□ 0.27
CXCL12-201ENST00000343575 MARCKSP29966 332 aaPredicted RBP16.75■□□□□ 0.27
CXCL12-201ENST00000343575 MRPL12P52815 198 aaKnown RBP16.75■□□□□ 0.27
CXCL12-201ENST00000343575 STK38Q15208 465 aa16.75■□□□□ 0.27
CXCL12-201ENST00000343575 ZNF174Q15697 407 aa16.75■□□□□ 0.27
CXCL12-201ENST00000343575 TPRNQ4KMQ1 711 aa16.75■□□□□ 0.27
CXCL12-201ENST00000343575 TTC38Q5R3I4 469 aa16.75■□□□□ 0.27
CXCL12-201ENST00000343575 GPAT2Q6NUI2 795 aa16.75■□□□□ 0.27
CXCL12-201ENST00000343575 SASS6Q6UVJ0 657 aa16.75■□□□□ 0.27
CXCL12-201ENST00000343575 C2orf69Q8N8R5 385 aa16.75■□□□□ 0.27
CXCL12-201ENST00000343575 MS4A4AQ96JQ5 239 aa16.75■□□□□ 0.27
CXCL12-201ENST00000343575 R3HCC1Q9Y3T6 440 aaKnown RBP16.75■□□□□ 0.27
CXCL12-201ENST00000343575 TRPM7Q96QT4 1865 aa16.75■□□□□ 0.27
CXCL12-201ENST00000343575 PASKQ96RG2 1323 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms