RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 C19orf81C9J6K1 198 aa19.79■□□□□ 0.76
CLDN4-201ENST00000340958 DGKZQ13574 1117 aa19.79■□□□□ 0.76
CLDN4-201ENST00000340958 PTPAQ15257 358 aa19.79■□□□□ 0.76
CLDN4-201ENST00000340958 HHIPL1Q96JK4 782 aa19.79■□□□□ 0.76
CLDN4-201ENST00000340958 TMEM63CQ9P1W3 806 aa19.79■□□□□ 0.76
CLDN4-201ENST00000340958 PLA2G6O60733 806 aa19.79■□□□□ 0.76
CLDN4-201ENST00000340958 FLOT1O75955 427 aa19.79■□□□□ 0.76
CLDN4-201ENST00000340958 VCAM1P19320 739 aa19.79■□□□□ 0.76
CLDN4-201ENST00000340958 MCM7P33993 719 aa19.79■□□□□ 0.76
CLDN4-201ENST00000340958 INF2Q27J81 1249 aa19.79■□□□□ 0.76
CLDN4-201ENST00000340958 CCDC183Q5T5S1 534 aa19.79■□□□□ 0.76
CLDN4-201ENST00000340958 KRI1Q8N9T8 703 aaKnown RBP19.79■□□□□ 0.76
CLDN4-201ENST00000340958 FSIP1Q8NA03 581 aa19.79■□□□□ 0.76
CLDN4-201ENST00000340958 CAPNS2Q96L46 248 aa19.79■□□□□ 0.76
CLDN4-201ENST00000340958 SLF1Q9BQI6 1058 aa19.79■□□□□ 0.76
CLDN4-201ENST00000340958 RPAP3Q9H6T3 665 aaPredicted RBP19.79■□□□□ 0.76
CLDN4-201ENST00000340958 EMILIN3Q9NT22 766 aa19.79■□□□□ 0.76
CLDN4-201ENST00000340958 FBXO28Q9NVF7 368 aa19.79■□□□□ 0.76
CLDN4-201ENST00000340958 M0R2N6 131 aa19.78■□□□□ 0.76
CLDN4-201ENST00000340958 LIG1P18858 919 aa19.78■□□□□ 0.76
CLDN4-201ENST00000340958 HMGCS2P54868 508 aa19.78■□□□□ 0.76
CLDN4-201ENST00000340958 ZSCAN23Q3MJ62 389 aa19.78■□□□□ 0.76
CLDN4-201ENST00000340958 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.78■□□□□ 0.76
CLDN4-201ENST00000340958 ARMC9Q7Z3E5 817 aa19.78■□□□□ 0.76
CLDN4-201ENST00000340958 PRPF38AQ8NAV1 312 aaKnown RBP19.78■□□□□ 0.76
CLDN4-201ENST00000340958 MRPS27Q92552 414 aaKnown RBP19.78■□□□□ 0.76
CLDN4-201ENST00000340958 TMEM260Q9NX78 707 aa19.78■□□□□ 0.76
CLDN4-201ENST00000340958 THSD7BQ9C0I4 1608 aa19.78■□□□□ 0.76
CLDN4-201ENST00000340958 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.77■□□□□ 0.76
CLDN4-201ENST00000340958 SNCAIPQ9Y6H5 919 aa19.77■□□□□ 0.76
CLDN4-201ENST00000340958 A0A1W2PQ27 194 aa19.76■□□□□ 0.75
CLDN4-201ENST00000340958 A0A1W2PQ64 194 aa19.76■□□□□ 0.75
CLDN4-201ENST00000340958 A0A1W2PQD8 194 aa19.76■□□□□ 0.75
CLDN4-201ENST00000340958 UBE2SQ16763 222 aa19.76■□□□□ 0.75
CLDN4-201ENST00000340958 RGMBQ6NW40 437 aa19.76■□□□□ 0.75
CLDN4-201ENST00000340958 ANKRD13AQ8IZ07 590 aa19.76■□□□□ 0.75
CLDN4-201ENST00000340958 RANBP17Q9H2T7 1088 aaKnown RBP19.76■□□□□ 0.75
CLDN4-201ENST00000340958 ELP3Q9H9T3 547 aa19.76■□□□□ 0.75
CLDN4-201ENST00000340958 DACT1Q9NYF0 836 aa19.76■□□□□ 0.75
CLDN4-201ENST00000340958 CUTAO60888 179 aa19.76■□□□□ 0.75
CLDN4-201ENST00000340958 LETM2Q2VYF4 491 aa19.76■□□□□ 0.75
CLDN4-201ENST00000340958 AFG3L2Q9Y4W6 797 aa19.76■□□□□ 0.75
CLDN4-201ENST00000340958 SYCE3A1L190 88 aa19.75■□□□□ 0.75
CLDN4-201ENST00000340958 NR1I2O75469 434 aa19.75■□□□□ 0.75
CLDN4-201ENST00000340958 LETM1O95202 739 aaPredicted RBP19.75■□□□□ 0.75
CLDN4-201ENST00000340958 NEK8Q86SG6 692 aa19.75■□□□□ 0.75
CLDN4-201ENST00000340958 TBCKQ8TEA7 893 aa19.75■□□□□ 0.75
CLDN4-201ENST00000340958 DDX19AQ9NUU7 478 aaKnown RBP19.75■□□□□ 0.75
CLDN4-201ENST00000340958 A0A1B0GVL5 298 aa19.74■□□□□ 0.75
CLDN4-201ENST00000340958 CCNT1O60563 726 aaKnown RBP19.74■□□□□ 0.75
CLDN4-201ENST00000340958 KINO60870 393 aaKnown RBP19.74■□□□□ 0.75
CLDN4-201ENST00000340958 AOC2O75106 756 aa19.74■□□□□ 0.75
CLDN4-201ENST00000340958 ZNF157P51786 506 aaPredicted RBP19.74■□□□□ 0.75
CLDN4-201ENST00000340958 PTGDRQ13258 359 aa19.74■□□□□ 0.75
CLDN4-201ENST00000340958 CLIC6Q96NY7 704 aa19.74■□□□□ 0.75
CLDN4-201ENST00000340958 NUP62CLQ9H1M0 184 aa19.74■□□□□ 0.75
CLDN4-201ENST00000340958 USP17L15C9J2P7 530 aa19.74■□□□□ 0.75
CLDN4-201ENST00000340958 USP17L13C9JLJ4 530 aa19.74■□□□□ 0.75
CLDN4-201ENST00000340958 USP17L11C9JVI0 530 aa19.74■□□□□ 0.75
CLDN4-201ENST00000340958 USP17L18D6R9N7 530 aa19.74■□□□□ 0.75
CLDN4-201ENST00000340958 USP17L22D6RA61 530 aa19.74■□□□□ 0.75
CLDN4-201ENST00000340958 USP17L17D6RBQ6 530 aa19.74■□□□□ 0.75
CLDN4-201ENST00000340958 USP17L19D6RCP7 530 aa19.74■□□□□ 0.75
CLDN4-201ENST00000340958 USP17L20D6RJB6 530 aa19.74■□□□□ 0.75
CLDN4-201ENST00000340958 ZBED4O75132 1171 aa19.74■□□□□ 0.75
CLDN4-201ENST00000340958 CMA1P23946 247 aa19.74■□□□□ 0.75
CLDN4-201ENST00000340958 FAM160A1Q05DH4 1040 aa19.74■□□□□ 0.75
CLDN4-201ENST00000340958 USP17L24Q0WX57 530 aa19.74■□□□□ 0.75
CLDN4-201ENST00000340958 MAP3K11Q16584 847 aa19.74■□□□□ 0.75
CLDN4-201ENST00000340958 USP17L6PQ6QN14 398 aa19.74■□□□□ 0.75
CLDN4-201ENST00000340958 OTUD5Q96G74 571 aa19.74■□□□□ 0.75
CLDN4-201ENST00000340958 GOLPH3LQ9H4A5 285 aa19.74■□□□□ 0.75
CLDN4-201ENST00000340958 CCPG1Q9ULG6 757 aa19.74■□□□□ 0.75
CLDN4-201ENST00000340958 MRPL11Q9Y3B7 192 aaKnown RBP19.74■□□□□ 0.75
CLDN4-201ENST00000340958 FAM155AB1AL88 458 aaPredicted RBP19.73■□□□□ 0.75
CLDN4-201ENST00000340958 WNT7AO00755 349 aa19.73■□□□□ 0.75
CLDN4-201ENST00000340958 CAMK4Q16566 473 aa19.73■□□□□ 0.75
CLDN4-201ENST00000340958 AXDND1Q5T1B0 1012 aaPredicted RBP19.73■□□□□ 0.75
CLDN4-201ENST00000340958 LDLRAD1Q5T700 205 aa19.73■□□□□ 0.75
CLDN4-201ENST00000340958 CPXCR1Q8N123 301 aa19.73■□□□□ 0.75
CLDN4-201ENST00000340958 FAM13BQ9NYF5 915 aa19.73■□□□□ 0.75
CLDN4-201ENST00000340958 PPP1R9AQ9ULJ8 1098 aa19.73■□□□□ 0.75
CLDN4-201ENST00000340958 SRPRBQ9Y5M8 271 aaKnown RBP19.73■□□□□ 0.75
CLDN4-201ENST00000340958 SPDYE3A6NKU9 549 aa19.72■□□□□ 0.75
CLDN4-201ENST00000340958 TAL1P17542 331 aaPredicted RBP19.72■□□□□ 0.75
CLDN4-201ENST00000340958 PTPREP23469 700 aa19.72■□□□□ 0.75
CLDN4-201ENST00000340958 MCTP2Q6DN12 878 aa19.72■□□□□ 0.75
CLDN4-201ENST00000340958 ERO1BQ86YB8 467 aa19.72■□□□□ 0.75
CLDN4-201ENST00000340958 FERMT2Q96AC1 680 aa19.72■□□□□ 0.75
CLDN4-201ENST00000340958 C12orf42Q96LP6 360 aa19.72■□□□□ 0.75
CLDN4-201ENST00000340958 TNMDQ9H2S6 317 aa19.72■□□□□ 0.75
CLDN4-201ENST00000340958 FBXO2Q9UK22 296 aaPredicted RBP19.72■□□□□ 0.75
CLDN4-201ENST00000340958 MRVI1Q9Y6F6 885 aa19.72■□□□□ 0.75
CLDN4-201ENST00000340958 ABCB11O95342 1321 aa19.72■□□□□ 0.75
CLDN4-201ENST00000340958 NDUFA8P51970 172 aa19.72■□□□□ 0.75
CLDN4-201ENST00000340958 ATP2C1P98194 919 aaPredicted RBP19.72■□□□□ 0.75
CLDN4-201ENST00000340958 PPATQ06203 517 aa19.72■□□□□ 0.75
CLDN4-201ENST00000340958 RASAL3Q86YV0 1011 aa19.72■□□□□ 0.75
CLDN4-201ENST00000340958 CNKSR2Q8WXI2 1034 aa19.72■□□□□ 0.75
CLDN4-201ENST00000340958 CLMNQ96JQ2 1002 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms