RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 FBXO11Q86XK2 927 aa22.31■■□□□ 1.16
SYNE4-202ENST00000340477 KCNB2Q92953 911 aa22.31■■□□□ 1.16
SYNE4-202ENST00000340477 LRRC2Q9BYS8 371 aa22.31■■□□□ 1.16
SYNE4-202ENST00000340477 SYNGAP1Q96PV0 1343 aa22.31■■□□□ 1.16
SYNE4-202ENST00000340477 FRMPD3Q5JV73 1810 aa22.3■■□□□ 1.16
SYNE4-202ENST00000340477 PTPDC1A2A3K4 754 aa22.3■■□□□ 1.16
SYNE4-202ENST00000340477 CYBAP13498 195 aa22.3■■□□□ 1.16
SYNE4-202ENST00000340477 QRICH1Q2TAL8 776 aa22.3■■□□□ 1.16
SYNE4-202ENST00000340477 ADCK5Q3MIX3 580 aa22.3■■□□□ 1.16
SYNE4-202ENST00000340477 MUM1L1Q5H9M0 696 aa22.3■■□□□ 1.16
SYNE4-202ENST00000340477 SHISA4Q96DD7 197 aa22.3■■□□□ 1.16
SYNE4-202ENST00000340477 LZTS2Q9BRK4 669 aa22.3■■□□□ 1.16
SYNE4-202ENST00000340477 JMJD4Q9H9V9 463 aa22.3■■□□□ 1.16
SYNE4-202ENST00000340477 SNX14Q9Y5W7 946 aa22.3■■□□□ 1.16
SYNE4-202ENST00000340477 FARP2O94887 1054 aaPredicted RBP22.29■■□□□ 1.16
SYNE4-202ENST00000340477 SGMS1Q86VZ5 419 aa22.29■■□□□ 1.16
SYNE4-202ENST00000340477 ANKLE1Q8NAG6 615 aa22.29■■□□□ 1.16
SYNE4-202ENST00000340477 MPHOSPH6Q99547 160 aaKnown RBP22.29■■□□□ 1.16
SYNE4-202ENST00000340477 MYL10Q9BUA6 226 aa22.29■■□□□ 1.16
SYNE4-202ENST00000340477 AMNQ9BXJ7 453 aa22.29■■□□□ 1.16
SYNE4-202ENST00000340477 CRISPLD2Q9H0B8 497 aa22.29■■□□□ 1.16
SYNE4-202ENST00000340477 GPHNQ9NQX3 736 aaPredicted RBP22.29■■□□□ 1.16
SYNE4-202ENST00000340477 CYP39A1Q9NYL5 469 aa22.29■■□□□ 1.16
SYNE4-202ENST00000340477 ADD3Q9UEY8 706 aaKnown RBP22.29■■□□□ 1.16
SYNE4-202ENST00000340477 DDX20Q9UHI6 824 aaKnown RBP22.29■■□□□ 1.16
SYNE4-202ENST00000340477 MRPL11Q9Y3B7 192 aaKnown RBP22.29■■□□□ 1.16
SYNE4-202ENST00000340477 SMCHD1A6NHR9 2005 aa22.29■■□□□ 1.16
SYNE4-202ENST00000340477 ASB14A6NK59 587 aa22.28■■□□□ 1.16
SYNE4-202ENST00000340477 NFIBO00712 420 aa22.28■■□□□ 1.16
SYNE4-202ENST00000340477 ZBTB5O15062 677 aa22.28■■□□□ 1.16
SYNE4-202ENST00000340477 TAL1P17542 331 aaPredicted RBP22.28■■□□□ 1.16
SYNE4-202ENST00000340477 RNF207Q6ZRF8 634 aa22.28■■□□□ 1.16
SYNE4-202ENST00000340477 MICU3Q86XE3 530 aa22.28■■□□□ 1.16
SYNE4-202ENST00000340477 HOMER1Q86YM7 354 aa22.28■■□□□ 1.16
SYNE4-202ENST00000340477 MCF2L2Q86YR7 1114 aa22.28■■□□□ 1.16
SYNE4-202ENST00000340477 SEPT4O43236 478 aa22.27■■□□□ 1.16
SYNE4-202ENST00000340477 IGHA2P01877 340 aa22.27■■□□□ 1.16
SYNE4-202ENST00000340477 EXOSC10Q01780 885 aaKnown RBP22.27■■□□□ 1.16
SYNE4-202ENST00000340477 MAMDC4Q6UXC1 1216 aa22.27■■□□□ 1.16
SYNE4-202ENST00000340477 FAM133AQ8N9E0 248 aa22.27■■□□□ 1.16
SYNE4-202ENST00000340477 TCEANC2Q96MN5 208 aa22.27■■□□□ 1.16
SYNE4-202ENST00000340477 USP26Q9BXU7 913 aa22.27■■□□□ 1.16
SYNE4-202ENST00000340477 MAF1Q9H063 256 aa22.27■■□□□ 1.16
SYNE4-202ENST00000340477 SEC63Q9UGP8 760 aaKnown RBP22.27■■□□□ 1.16
SYNE4-202ENST00000340477 BRCA2P51587 3418 aa22.27■■□□□ 1.15
SYNE4-202ENST00000340477 CASTP20810 708 aaKnown RBP22.26■■□□□ 1.15
SYNE4-202ENST00000340477 CALML3P27482 149 aa22.26■■□□□ 1.15
SYNE4-202ENST00000340477 CNTN2Q02246 1040 aa22.26■■□□□ 1.15
SYNE4-202ENST00000340477 BAATQ14032 418 aaPredicted RBP22.26■■□□□ 1.15
SYNE4-202ENST00000340477 SPZ1Q9BXG8 430 aa22.26■■□□□ 1.15
SYNE4-202ENST00000340477 RIOX1Q9H6W3 641 aa22.26■■□□□ 1.15
SYNE4-202ENST00000340477 ZHX1Q9UKY1 873 aaPredicted RBP22.26■■□□□ 1.15
SYNE4-202ENST00000340477 NAP1L2Q9ULW6 460 aaPredicted RBP22.26■■□□□ 1.15
SYNE4-202ENST00000340477 MCM3APO60318 1980 aa22.26■■□□□ 1.15
SYNE4-202ENST00000340477 B4DLN1 442 aa22.25■■□□□ 1.15
SYNE4-202ENST00000340477 ZBTB43O43298 467 aa22.25■■□□□ 1.15
SYNE4-202ENST00000340477 SMARCA1P28370 1054 aa22.25■■□□□ 1.15
SYNE4-202ENST00000340477 MRPL12P52815 198 aaKnown RBP22.25■■□□□ 1.15
SYNE4-202ENST00000340477 ARMCX2Q7L311 632 aa22.25■■□□□ 1.15
SYNE4-202ENST00000340477 CCDC144CPQ8IYA2 1237 aa22.25■■□□□ 1.15
SYNE4-202ENST00000340477 RGS22Q8NE09 1264 aa22.25■■□□□ 1.15
SYNE4-202ENST00000340477 TRPV1Q8NER1 839 aa22.25■■□□□ 1.15
SYNE4-202ENST00000340477 CLEC4DQ8WXI8 215 aa22.25■■□□□ 1.15
SYNE4-202ENST00000340477 RRP36Q96EU6 259 aaKnown RBP22.25■■□□□ 1.15
SYNE4-202ENST00000340477 RBM28Q9NW13 759 aaKnown RBP22.25■■□□□ 1.15
SYNE4-202ENST00000340477 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.25■■□□□ 1.15
SYNE4-202ENST00000340477 OGDHLQ9ULD0 1010 aa22.25■■□□□ 1.15
SYNE4-202ENST00000340477 LCTP09848 1927 aa22.24■■□□□ 1.15
SYNE4-202ENST00000340477 BAZ2BQ9UIF8 2168 aaKnown RBP22.24■■□□□ 1.15
SYNE4-202ENST00000340477 LOC102724159A0A0B4J2E5 919 aa22.24■■□□□ 1.15
SYNE4-202ENST00000340477 PNMA6FA0A0J9YX94 578 aa22.24■■□□□ 1.15
SYNE4-202ENST00000340477 KLF18A0A0U1RQI7 1052 aa22.24■■□□□ 1.15
SYNE4-202ENST00000340477 AKR1A1P14550 325 aa22.24■■□□□ 1.15
SYNE4-202ENST00000340477 RXRAP19793 462 aa22.24■■□□□ 1.15
SYNE4-202ENST00000340477 RPS6KB1P23443 525 aa22.24■■□□□ 1.15
SYNE4-202ENST00000340477 COL9A3Q14050 684 aaPredicted RBP22.24■■□□□ 1.15
SYNE4-202ENST00000340477 PWP2Q15269 919 aaKnown RBP22.24■■□□□ 1.15
SYNE4-202ENST00000340477 PRAMEF19Q5SWL8 479 aa22.24■■□□□ 1.15
SYNE4-202ENST00000340477 APOA5Q6Q788 366 aa22.24■■□□□ 1.15
SYNE4-202ENST00000340477 SLC30A10Q6XR72 485 aa22.24■■□□□ 1.15
SYNE4-202ENST00000340477 FANCBQ8NB91 859 aa22.24■■□□□ 1.15
SYNE4-202ENST00000340477 MTMR8Q96EF0 704 aa22.24■■□□□ 1.15
SYNE4-202ENST00000340477 PIGSQ96S52 555 aa22.24■■□□□ 1.15
SYNE4-202ENST00000340477 HTATIP2Q9BUP3 242 aa22.24■■□□□ 1.15
SYNE4-202ENST00000340477 ABHD16BQ9H3Z7 469 aa22.24■■□□□ 1.15
SYNE4-202ENST00000340477 PCDHA1Q9Y5I3 950 aa22.24■■□□□ 1.15
SYNE4-202ENST00000340477 RARBP10826 455 aa22.23■■□□□ 1.15
SYNE4-202ENST00000340477 RCAN1P53805 252 aa22.23■■□□□ 1.15
SYNE4-202ENST00000340477 RPS6P62753 249 aaKnown RBP22.23■■□□□ 1.15
SYNE4-202ENST00000340477 Q6ZUG5 572 aa22.23■■□□□ 1.15
SYNE4-202ENST00000340477 NECAB2Q7Z6G3 386 aa22.23■■□□□ 1.15
SYNE4-202ENST00000340477 RAB11FIP4Q86YS3 637 aa22.23■■□□□ 1.15
SYNE4-202ENST00000340477 CYP46A1Q9Y6A2 500 aa22.23■■□□□ 1.15
SYNE4-202ENST00000340477 SOWAHBA6NEL2 793 aa22.22■■□□□ 1.15
SYNE4-202ENST00000340477 GOLGA8AA7E2F4 631 aa22.22■■□□□ 1.15
SYNE4-202ENST00000340477 GOLGA8BA8MQT2 603 aa22.22■■□□□ 1.15
SYNE4-202ENST00000340477 ACVR2BQ13705 512 aa22.22■■□□□ 1.15
SYNE4-202ENST00000340477 RTN1Q16799 776 aa22.22■■□□□ 1.15
SYNE4-202ENST00000340477 LHX8Q68G74 356 aa22.22■■□□□ 1.15
SYNE4-202ENST00000340477 ARRDC4Q8NCT1 418 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms