RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 FAM71BQ8TC56 605 aa18.79■□□□□ 0.6
TRAPPC11-201ENST00000334690 EEF2KMTQ96G04 330 aa18.79■□□□□ 0.6
TRAPPC11-201ENST00000334690 WDR19Q8NEZ3 1342 aa18.79■□□□□ 0.6
TRAPPC11-201ENST00000334690 CTNNA1P35221 906 aaKnown RBP18.79■□□□□ 0.6
TRAPPC11-201ENST00000334690 APBA1Q02410 837 aa18.79■□□□□ 0.6
TRAPPC11-201ENST00000334690 UAP1Q16222 522 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC11-201ENST00000334690 ARL6IP4Q66PJ3 421 aaKnown RBP18.79■□□□□ 0.6
TRAPPC11-201ENST00000334690 KIAA0825Q8IV33 1275 aa18.79■□□□□ 0.6
TRAPPC11-201ENST00000334690 PIGBQ92521 554 aa18.79■□□□□ 0.6
TRAPPC11-201ENST00000334690 AIFM3Q96NN9 605 aa18.79■□□□□ 0.6
TRAPPC11-201ENST00000334690 RWDD2AQ9UIY3 292 aa18.79■□□□□ 0.6
TRAPPC11-201ENST00000334690 LAMC1P11047 1609 aa18.79■□□□□ 0.6
TRAPPC11-201ENST00000334690 TNNI1P19237 187 aa18.79■□□□□ 0.6
TRAPPC11-201ENST00000334690 MAN2A1Q16706 1144 aa18.79■□□□□ 0.6
TRAPPC11-201ENST00000334690 EXOC3L4Q17RC7 722 aa18.79■□□□□ 0.6
TRAPPC11-201ENST00000334690 FAM184BQ9ULE4 1060 aa18.79■□□□□ 0.6
TRAPPC11-201ENST00000334690 GOLGA8KD6RF30 607 aa18.79■□□□□ 0.6
TRAPPC11-201ENST00000334690 RBL2Q08999 1139 aa18.79■□□□□ 0.6
TRAPPC11-201ENST00000334690 PPFIBP2Q8ND30 876 aa18.79■□□□□ 0.6
TRAPPC11-201ENST00000334690 MTA3Q9BTC8 594 aa18.79■□□□□ 0.6
TRAPPC11-201ENST00000334690 NIM1KQ8IY84 436 aa18.78■□□□□ 0.6
TRAPPC11-201ENST00000334690 E7EVH7 732 aa18.78■□□□□ 0.6
TRAPPC11-201ENST00000334690 BUB1O43683 1085 aa18.78■□□□□ 0.6
TRAPPC11-201ENST00000334690 MCAMP43121 646 aa18.78■□□□□ 0.6
TRAPPC11-201ENST00000334690 GNPTABQ3T906 1256 aa18.78■□□□□ 0.6
TRAPPC11-201ENST00000334690 SMYD4Q8IYR2 804 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC11-201ENST00000334690 RASGRP4Q8TDF6 673 aa18.78■□□□□ 0.6
TRAPPC11-201ENST00000334690 GPHNQ9NQX3 736 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC11-201ENST00000334690 KIAA1024Q9UPX6 916 aa18.78■□□□□ 0.6
TRAPPC11-201ENST00000334690 USTQ9Y2C2 406 aa18.78■□□□□ 0.6
TRAPPC11-201ENST00000334690 PCDHB6Q9Y5E3 794 aa18.78■□□□□ 0.6
TRAPPC11-201ENST00000334690 LRRC7Q96NW7 1537 aa18.78■□□□□ 0.6
TRAPPC11-201ENST00000334690 CCDC151A5D8V7 595 aa18.78■□□□□ 0.6
TRAPPC11-201ENST00000334690 H0YCG3 227 aa18.78■□□□□ 0.6
TRAPPC11-201ENST00000334690 BBOX1O75936 387 aa18.78■□□□□ 0.6
TRAPPC11-201ENST00000334690 CCNE1P24864 410 aa18.78■□□□□ 0.6
TRAPPC11-201ENST00000334690 TMED8Q6PL24 325 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC11-201ENST00000334690 PLA2G4DQ86XP0 818 aa18.78■□□□□ 0.6
TRAPPC11-201ENST00000334690 PDLIM2Q96JY6 352 aa18.78■□□□□ 0.6
TRAPPC11-201ENST00000334690 SETBP1Q9Y6X0 1596 aa18.77■□□□□ 0.6
TRAPPC11-201ENST00000334690 PTPREP23469 700 aa18.77■□□□□ 0.6
TRAPPC11-201ENST00000334690 SCNN1DP51172 638 aa18.77■□□□□ 0.6
TRAPPC11-201ENST00000334690 CEP85LQ5SZL2 805 aa18.77■□□□□ 0.6
TRAPPC11-201ENST00000334690 DGKHQ86XP1 1220 aa18.77■□□□□ 0.6
TRAPPC11-201ENST00000334690 GRAMD1CQ8IYS0 662 aa18.77■□□□□ 0.6
TRAPPC11-201ENST00000334690 NLGN1Q8N2Q7 840 aa18.77■□□□□ 0.6
TRAPPC11-201ENST00000334690 ANKRD13CQ8N6S4 541 aa18.77■□□□□ 0.6
TRAPPC11-201ENST00000334690 RSRC1Q96IZ7 334 aaKnown RBP18.77■□□□□ 0.6
TRAPPC11-201ENST00000334690 SAMSN1Q9NSI8 373 aaKnown RBP18.77■□□□□ 0.6
TRAPPC11-201ENST00000334690 SERPINB13Q9UIV8 391 aa18.77■□□□□ 0.6
TRAPPC11-201ENST00000334690 CLEC11AQ9Y240 323 aa18.77■□□□□ 0.6
TRAPPC11-201ENST00000334690 USP31Q70CQ4 1352 aa18.77■□□□□ 0.6
TRAPPC11-201ENST00000334690 RGS16O15492 202 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC11-201ENST00000334690 TTLL1O95922 423 aa18.77■□□□□ 0.6
TRAPPC11-201ENST00000334690 GUCY2FP51841 1108 aa18.77■□□□□ 0.6
TRAPPC11-201ENST00000334690 ALDH8A1Q9H2A2 487 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC11-201ENST00000334690 TRIM37O94972 964 aa18.77■□□□□ 0.59
TRAPPC11-201ENST00000334690 CFAP157Q5JU67 520 aa18.77■□□□□ 0.59
TRAPPC11-201ENST00000334690 VSIG1Q86XK7 387 aa18.77■□□□□ 0.59
TRAPPC11-201ENST00000334690 TBCKQ8TEA7 893 aa18.77■□□□□ 0.59
TRAPPC11-201ENST00000334690 PANX2Q96RD6 677 aa18.77■□□□□ 0.59
TRAPPC11-201ENST00000334690 RABEP2Q9H5N1 569 aa18.77■□□□□ 0.59
TRAPPC11-201ENST00000334690 RABGAP1Q9Y3P9 1069 aa18.77■□□□□ 0.59
TRAPPC11-201ENST00000334690 ALKQ9UM73 1620 aa18.77■□□□□ 0.59
TRAPPC11-201ENST00000334690 ZBED6P86452 979 aa18.76■□□□□ 0.59
TRAPPC11-201ENST00000334690 CCDC110Q8TBZ0 833 aa18.76■□□□□ 0.59
TRAPPC11-201ENST00000334690 TEKT3Q9BXF9 490 aa18.76■□□□□ 0.59
TRAPPC11-201ENST00000334690 HOMER3Q9NSC5 361 aa18.76■□□□□ 0.59
TRAPPC11-201ENST00000334690 CHD1O14646 1710 aa18.76■□□□□ 0.59
TRAPPC11-201ENST00000334690 LGSNQ5TDP6 509 aa18.76■□□□□ 0.59
TRAPPC11-201ENST00000334690 MCF2L2Q86YR7 1114 aa18.76■□□□□ 0.59
TRAPPC11-201ENST00000334690 CCDC170Q8IYT3 715 aa18.76■□□□□ 0.59
TRAPPC11-201ENST00000334690 STK36Q9NRP7 1315 aa18.76■□□□□ 0.59
TRAPPC11-201ENST00000334690 ZDHHC9Q9Y397 364 aa18.76■□□□□ 0.59
TRAPPC11-201ENST00000334690 CDC42BPBQ9Y5S2 1711 aa18.76■□□□□ 0.59
TRAPPC11-201ENST00000334690 TMEM232C9JQI7 657 aa18.76■□□□□ 0.59
TRAPPC11-201ENST00000334690 YWHAEP62258 255 aaKnown RBP18.76■□□□□ 0.59
TRAPPC11-201ENST00000334690 GJA10Q969M2 543 aa18.76■□□□□ 0.59
TRAPPC11-201ENST00000334690 BRIP1Q9BX63 1249 aa18.76■□□□□ 0.59
TRAPPC11-201ENST00000334690 AOC3Q16853 763 aa18.76■□□□□ 0.59
TRAPPC11-201ENST00000334690 ABCB5Q2M3G0 1257 aa18.76■□□□□ 0.59
TRAPPC11-201ENST00000334690 TSGA10IPQ3SY00 556 aa18.76■□□□□ 0.59
TRAPPC11-201ENST00000334690 PGBD1Q96JS3 809 aa18.76■□□□□ 0.59
TRAPPC11-201ENST00000334690 KIF2CQ99661 725 aa18.76■□□□□ 0.59
TRAPPC11-201ENST00000334690 ATP1A3P13637 1013 aa18.75■□□□□ 0.59
TRAPPC11-201ENST00000334690 KRT15P19012 456 aa18.75■□□□□ 0.59
TRAPPC11-201ENST00000334690 NR2F2P24468 414 aa18.75■□□□□ 0.59
TRAPPC11-201ENST00000334690 RCAN1P53805 252 aa18.75■□□□□ 0.59
TRAPPC11-201ENST00000334690 CYP4A11Q02928 519 aa18.75■□□□□ 0.59
TRAPPC11-201ENST00000334690 ERFEQ4G0M1 354 aa18.75■□□□□ 0.59
TRAPPC11-201ENST00000334690 HHATQ5VTY9 493 aa18.75■□□□□ 0.59
TRAPPC11-201ENST00000334690 CLEC4GQ6UXB4 293 aa18.75■□□□□ 0.59
TRAPPC11-201ENST00000334690 SPATA24Q86W54 205 aa18.75■□□□□ 0.59
TRAPPC11-201ENST00000334690 DEPTORQ8TB45 409 aa18.75■□□□□ 0.59
TRAPPC11-201ENST00000334690 VTI1AQ96AJ9 217 aa18.75■□□□□ 0.59
TRAPPC11-201ENST00000334690 CDC42BPGQ6DT37 1551 aa18.75■□□□□ 0.59
TRAPPC11-201ENST00000334690 ATP11AP98196 1134 aa18.75■□□□□ 0.59
TRAPPC11-201ENST00000334690 STAG1Q8WVM7 1258 aa18.75■□□□□ 0.59
TRAPPC11-201ENST00000334690 STMN2Q93045 179 aa18.75■□□□□ 0.59
TRAPPC11-201ENST00000334690 SERPINA10Q9UK55 444 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms