RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 CEP295Q9C0D2 2601 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 PCDH15Q96QU1 1955 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 KIAA1549Q9HCM3 1950 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 HTATSF1O43719 755 aaKnown RBP2.99□□□□□ -1.93
RGPD6-201ENST00000329516 KDM4AO75164 1064 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 MAGEA10P43363 369 aaPredicted RBP2.99□□□□□ -1.93
RGPD6-201ENST00000329516 MAMDC4Q6UXC1 1216 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 NOL8Q76FK4 1167 aaKnown RBP2.99□□□□□ -1.93
RGPD6-201ENST00000329516 LUZP1Q86V48 1076 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 PROSER2Q86WR7 435 aaPredicted RBP2.99□□□□□ -1.93
RGPD6-201ENST00000329516 BRF1Q92994 677 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 CLIC4Q9Y696 253 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 CEBPZQ03701 1054 aaKnown RBP2.99□□□□□ -1.93
RGPD6-201ENST00000329516 ZNF252P-AS1Q0IIN9 211 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 TRIM14Q14142 442 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 TSR1Q2NL82 804 aaKnown RBP2.99□□□□□ -1.93
RGPD6-201ENST00000329516 LGSNQ5TDP6 509 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.99□□□□□ -1.93
RGPD6-201ENST00000329516 CCT6BQ92526 530 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 ATP2A3Q93084 1043 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 C10orf88Q9H8K7 445 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 FAM13BQ9NYF5 915 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 HEATR5BQ9P2D3 2071 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 KIF3CO14782 793 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 HERVK_113P62684 666 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 SATB1Q01826 763 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 IFT88Q13099 833 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 LAIR2Q6ISS4 152 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 EPM2AIP1Q7L775 607 aaPredicted RBP2.99□□□□□ -1.93
RGPD6-201ENST00000329516 KIAA0319LQ8IZA0 1049 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 ZNF513Q8N8E2 541 aaPredicted RBP2.99□□□□□ -1.93
RGPD6-201ENST00000329516 NECAB1Q8N987 351 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 KIAA0895Q8NCT3 520 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 SMARCE1Q969G3 411 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 CEP63Q96MT8 703 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 ZNF341Q9BYN7 854 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 NXF1Q9UBU9 619 aaKnown RBP2.99□□□□□ -1.93
RGPD6-201ENST00000329516 STXBP5LQ9Y2K9 1186 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 PDE4DIPQ5VU43 2346 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 VPS13BQ7Z7G8 4022 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 BIN1O00499 593 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 EFEMP2O95967 443 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 CPP00450 1065 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 CYP1A1P04798 512 aaPredicted RBP2.99□□□□□ -1.93
RGPD6-201ENST00000329516 FUT4P22083 530 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 CCDC157Q569K6 752 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 EGFL6Q8IUX8 553 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 SLC30A5Q8TAD4 765 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 FEZ1Q99689 392 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.99□□□□□ -1.93
RGPD6-201ENST00000329516 DEFB129Q9H1M3 183 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 NCOA5Q9HCD5 579 aaKnown RBP2.99□□□□□ -1.93
RGPD6-201ENST00000329516 DDX4Q9NQI0 724 aaKnown RBP2.99□□□□□ -1.93
RGPD6-201ENST00000329516 FAM114A2Q9NRY5 505 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 LEMD3Q9Y2U8 911 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 LOC102724428A0A0B4J2F2 783 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 SIK1P57059 783 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 GRIK3Q13003 919 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 MAPK8IP2Q13387 824 aaPredicted RBP2.99□□□□□ -1.93
RGPD6-201ENST00000329516 DZIP1Q86YF9 867 aaKnown RBP2.99□□□□□ -1.93
RGPD6-201ENST00000329516 LTV1Q96GA3 475 aaPredicted RBP2.99□□□□□ -1.93
RGPD6-201ENST00000329516 NOL10Q9BSC4 688 aaKnown RBP2.99□□□□□ -1.93
RGPD6-201ENST00000329516 C20orf27Q9GZN8 174 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 TMEM60Q9H2L4 133 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 SLC52A2Q9HAB3 445 aa2.99□□□□□ -1.93
RGPD6-201ENST00000329516 CGNQ9P2M7 1197 aaKnown RBP2.99□□□□□ -1.93
RGPD6-201ENST00000329516 DMGDHQ9UI17 866 aaKnown RBP2.99□□□□□ -1.93
RGPD6-201ENST00000329516 ZSCAN9O15535 394 aaPredicted RBP2.98□□□□□ -1.93
RGPD6-201ENST00000329516 LRIG2O94898 1065 aa2.98□□□□□ -1.93
RGPD6-201ENST00000329516 TAL1P17542 331 aaPredicted RBP2.98□□□□□ -1.93
RGPD6-201ENST00000329516 ATP5JP18859 108 aa2.98□□□□□ -1.93
RGPD6-201ENST00000329516 ZFP36L2P47974 494 aaKnown RBP2.98□□□□□ -1.93
RGPD6-201ENST00000329516 CNNM4Q6P4Q7 775 aa2.98□□□□□ -1.93
RGPD6-201ENST00000329516 LCA5Q86VQ0 697 aa2.98□□□□□ -1.93
RGPD6-201ENST00000329516 CCAR1Q8IX12 1150 aaKnown RBP2.98□□□□□ -1.93
RGPD6-201ENST00000329516 MSL3Q8N5Y2 521 aaKnown RBP2.98□□□□□ -1.93
RGPD6-201ENST00000329516 CD101Q93033 1021 aa2.98□□□□□ -1.93
RGPD6-201ENST00000329516 ZFYVE1Q9HBF4 777 aa2.98□□□□□ -1.93
RGPD6-201ENST00000329516 PDLIM7Q9NR12 457 aa2.98□□□□□ -1.93
RGPD6-201ENST00000329516 SMC4Q9NTJ3 1288 aa2.98□□□□□ -1.93
RGPD6-201ENST00000329516 ANKRD62A6NC57 917 aa2.98□□□□□ -1.93
RGPD6-201ENST00000329516 K7ELQ4 463 aaPredicted RBP2.98□□□□□ -1.93
RGPD6-201ENST00000329516 SOCS7O14512 581 aa2.98□□□□□ -1.93
RGPD6-201ENST00000329516 SSBP05455 408 aaKnown RBP eCLIP2.98□□□□□ -1.93
RGPD6-201ENST00000329516 PTGS1P23219 599 aa2.98□□□□□ -1.93
RGPD6-201ENST00000329516 ITGA7Q13683 1181 aa2.98□□□□□ -1.93
RGPD6-201ENST00000329516 HSP90AA2PQ14568 343 aaPredicted RBP2.98□□□□□ -1.93
RGPD6-201ENST00000329516 SF3A1Q15459 793 aaKnown RBP2.98□□□□□ -1.93
RGPD6-201ENST00000329516 LRRC43Q8N309 656 aa2.98□□□□□ -1.93
RGPD6-201ENST00000329516 PMFBP1Q8TBY8 1022 aa2.98□□□□□ -1.93
RGPD6-201ENST00000329516 LEO1Q8WVC0 666 aaPredicted RBP2.98□□□□□ -1.93
RGPD6-201ENST00000329516 HEXIM2Q96MH2 286 aaKnown RBP2.98□□□□□ -1.93
RGPD6-201ENST00000329516 INPP4AQ96PE3 977 aaPredicted RBP2.98□□□□□ -1.93
RGPD6-201ENST00000329516 MTMR9Q96QG7 549 aa2.98□□□□□ -1.93
RGPD6-201ENST00000329516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.98□□□□□ -1.93
RGPD6-201ENST00000329516 PCDHA7Q9UN72 937 aa2.98□□□□□ -1.93
RGPD6-201ENST00000329516 CROCCQ5TZA2 2017 aa2.98□□□□□ -1.93
RGPD6-201ENST00000329516 RFXAPO00287 272 aa2.98□□□□□ -1.93
RGPD6-201ENST00000329516 CASP5P51878 434 aa2.98□□□□□ -1.93
RGPD6-201ENST00000329516 SEMA3FQ13275 785 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms