RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 DHX16O60231 1041 aaKnown RBP32.23■■■□□ 2.75
ATPAF1-201ENST00000329231 CDC37Q16543 378 aaPredicted RBP32.23■■■□□ 2.75
ATPAF1-201ENST00000329231 TMEM67Q5HYA8 995 aa32.23■■■□□ 2.75
ATPAF1-201ENST00000329231 CREB3L3Q68CJ9 461 aa32.23■■■□□ 2.75
ATPAF1-201ENST00000329231 CHST3Q7LGC8 479 aa32.23■■■□□ 2.75
ATPAF1-201ENST00000329231 SENP6Q9GZR1 1112 aaPredicted RBP32.23■■■□□ 2.75
ATPAF1-201ENST00000329231 XPNPEP3Q9NQH7 507 aa32.23■■■□□ 2.75
ATPAF1-201ENST00000329231 MYCNP04198 464 aaPredicted RBP32.22■■■□□ 2.75
ATPAF1-201ENST00000329231 CLEC4DQ8WXI8 215 aa32.22■■■□□ 2.75
ATPAF1-201ENST00000329231 PTPDC1A2A3K4 754 aa32.21■■■□□ 2.75
ATPAF1-201ENST00000329231 ANTXR2P58335 489 aa32.21■■■□□ 2.75
ATPAF1-201ENST00000329231 BAATQ14032 418 aaPredicted RBP32.21■■■□□ 2.75
ATPAF1-201ENST00000329231 LRRC41Q15345 812 aa32.21■■■□□ 2.75
ATPAF1-201ENST00000329231 RNF20Q5VTR2 975 aa32.21■■■□□ 2.75
ATPAF1-201ENST00000329231 MTA3Q9BTC8 594 aa32.21■■■□□ 2.75
ATPAF1-201ENST00000329231 KLRF2D3W0D1 207 aa32.2■■■□□ 2.75
ATPAF1-201ENST00000329231 USH1GQ495M9 461 aa32.2■■■□□ 2.75
ATPAF1-201ENST00000329231 STAG2Q8N3U4 1231 aa32.2■■■□□ 2.75
ATPAF1-201ENST00000329231 IGDCC4Q8TDY8 1250 aa32.2■■■□□ 2.75
ATPAF1-201ENST00000329231 VAT1LQ9HCJ6 419 aa32.2■■■□□ 2.75
ATPAF1-201ENST00000329231 ADD3Q9UEY8 706 aaKnown RBP32.2■■■□□ 2.75
ATPAF1-201ENST00000329231 MAD2L2Q9UI95 211 aa32.2■■■□□ 2.75
ATPAF1-201ENST00000329231 SMCHD1A6NHR9 2005 aa32.19■■■□□ 2.74
ATPAF1-201ENST00000329231 MCM5P33992 734 aa32.19■■■□□ 2.74
ATPAF1-201ENST00000329231 RNF207Q6ZRF8 634 aa32.19■■■□□ 2.74
ATPAF1-201ENST00000329231 RNF180Q86T96 592 aa32.19■■■□□ 2.74
ATPAF1-201ENST00000329231 C7orf61Q8IZ16 206 aa32.19■■■□□ 2.74
ATPAF1-201ENST00000329231 JMJD4Q9H9V9 463 aa32.19■■■□□ 2.74
ATPAF1-201ENST00000329231 SENP2Q9HC62 589 aa32.19■■■□□ 2.74
ATPAF1-201ENST00000329231 PALM3A6NDB9 673 aaPredicted RBP32.18■■■□□ 2.74
ATPAF1-201ENST00000329231 GRM4Q14833 912 aa32.18■■■□□ 2.74
ATPAF1-201ENST00000329231 QRICH1Q2TAL8 776 aa32.18■■■□□ 2.74
ATPAF1-201ENST00000329231 CCDC144BQ3MJ40 725 aa32.18■■■□□ 2.74
ATPAF1-201ENST00000329231 CATIPQ7Z7H3 387 aa32.18■■■□□ 2.74
ATPAF1-201ENST00000329231 ABCB11O95342 1321 aa32.18■■■□□ 2.74
ATPAF1-201ENST00000329231 PRC1O43663 620 aa32.17■■■□□ 2.74
ATPAF1-201ENST00000329231 PGK1P00558 417 aa32.17■■■□□ 2.74
ATPAF1-201ENST00000329231 LRRC26Q2I0M4 334 aa32.17■■■□□ 2.74
ATPAF1-201ENST00000329231 RGS22Q8NE09 1264 aa32.17■■■□□ 2.74
ATPAF1-201ENST00000329231 MAF1Q9H063 256 aa32.17■■■□□ 2.74
ATPAF1-201ENST00000329231 KATNBL1Q9H079 304 aa32.17■■■□□ 2.74
ATPAF1-201ENST00000329231 ASTN1O14525 1302 aa32.17■■■□□ 2.74
ATPAF1-201ENST00000329231 LOC102724159A0A0B4J2E5 919 aa32.16■■■□□ 2.74
ATPAF1-201ENST00000329231 DUSP11O75319 330 aaKnown RBP32.16■■■□□ 2.74
ATPAF1-201ENST00000329231 CALML3P27482 149 aa32.16■■■□□ 2.74
ATPAF1-201ENST00000329231 TROAPQ12815 778 aa32.16■■■□□ 2.74
ATPAF1-201ENST00000329231 PWP2Q15269 919 aaKnown RBP32.16■■■□□ 2.74
ATPAF1-201ENST00000329231 FBXO11Q86XK2 927 aa32.16■■■□□ 2.74
ATPAF1-201ENST00000329231 LENG1Q96BZ8 264 aaPredicted RBP32.16■■■□□ 2.74
ATPAF1-201ENST00000329231 TMEM87BQ96K49 555 aa32.16■■■□□ 2.74
ATPAF1-201ENST00000329231 PURBQ96QR8 312 aaKnown RBP32.16■■■□□ 2.74
ATPAF1-201ENST00000329231 ALPK3Q96L96 1907 aa32.16■■■□□ 2.74
ATPAF1-201ENST00000329231 CEP290O15078 2479 aa32.15■■■□□ 2.74
ATPAF1-201ENST00000329231 RPS6P62753 249 aaKnown RBP32.15■■■□□ 2.74
ATPAF1-201ENST00000329231 SLC30A10Q6XR72 485 aa32.15■■■□□ 2.74
ATPAF1-201ENST00000329231 TMTC2Q8N394 836 aa32.15■■■□□ 2.74
ATPAF1-201ENST00000329231 LY9Q9HBG7 655 aa32.15■■■□□ 2.74
ATPAF1-201ENST00000329231 MCM3APO60318 1980 aa32.14■■■□□ 2.74
ATPAF1-201ENST00000329231 MORC4Q8TE76 937 aa32.14■■■□□ 2.74
ATPAF1-201ENST00000329231 MRPL11Q9Y3B7 192 aaKnown RBP32.14■■■□□ 2.74
ATPAF1-201ENST00000329231 ADAMTS4O75173 837 aa32.13■■■□□ 2.73
ATPAF1-201ENST00000329231 ADCYAP1R1P41586 468 aa32.13■■■□□ 2.73
ATPAF1-201ENST00000329231 ALDH5A1P51649 535 aaPredicted RBP32.13■■■□□ 2.73
ATPAF1-201ENST00000329231 ATN1P54259 1190 aaPredicted RBP32.13■■■□□ 2.73
ATPAF1-201ENST00000329231 MCF2L2Q86YR7 1114 aa32.13■■■□□ 2.73
ATPAF1-201ENST00000329231 MTMR8Q96EF0 704 aa32.13■■■□□ 2.73
ATPAF1-201ENST00000329231 MPHOSPH6Q99547 160 aaKnown RBP32.13■■■□□ 2.73
ATPAF1-201ENST00000329231 AMNQ9BXJ7 453 aa32.13■■■□□ 2.73
ATPAF1-201ENST00000329231 SPC25Q9HBM1 224 aa32.13■■■□□ 2.73
ATPAF1-201ENST00000329231 SYNRGQ9UMZ2 1314 aa32.13■■■□□ 2.73
ATPAF1-201ENST00000329231 PHF24Q9UPV7 400 aa32.13■■■□□ 2.73
ATPAF1-201ENST00000329231 ZBTB5O15062 677 aa32.12■■■□□ 2.73
ATPAF1-201ENST00000329231 DNERQ8NFT8 737 aa32.12■■■□□ 2.73
ATPAF1-201ENST00000329231 MAP3K14Q99558 947 aa32.12■■■□□ 2.73
ATPAF1-201ENST00000329231 TSEN34Q9BSV6 310 aaKnown RBP32.12■■■□□ 2.73
ATPAF1-201ENST00000329231 COLQQ9Y215 455 aaPredicted RBP32.12■■■□□ 2.73
ATPAF1-201ENST00000329231 SH2B2O14492 632 aaPredicted RBP32.11■■■□□ 2.73
ATPAF1-201ENST00000329231 DDAH1O94760 285 aa32.11■■■□□ 2.73
ATPAF1-201ENST00000329231 CHRDL2Q6WN34 429 aa32.11■■■□□ 2.73
ATPAF1-201ENST00000329231 NFXL1Q6ZNB6 911 aa32.11■■■□□ 2.73
ATPAF1-201ENST00000329231 ZNF654Q8IZM8 581 aa32.11■■■□□ 2.73
ATPAF1-201ENST00000329231 NUP133Q8WUM0 1156 aa32.11■■■□□ 2.73
ATPAF1-201ENST00000329231 RIOX1Q9H6W3 641 aa32.11■■■□□ 2.73
ATPAF1-201ENST00000329231 VTA1Q9NP79 307 aa32.11■■■□□ 2.73
ATPAF1-201ENST00000329231 GPHNQ9NQX3 736 aaPredicted RBP32.11■■■□□ 2.73
ATPAF1-201ENST00000329231 ZMYND8Q9ULU4 1186 aaPredicted RBP32.11■■■□□ 2.73
ATPAF1-201ENST00000329231 ADCY6O43306 1168 aa32.1■■■□□ 2.73
ATPAF1-201ENST00000329231 TNFAIP2Q03169 654 aa32.1■■■□□ 2.73
ATPAF1-201ENST00000329231 SLC39A5Q6ZMH5 540 aa32.1■■■□□ 2.73
ATPAF1-201ENST00000329231 KLHDC9Q8NEP7 349 aa32.1■■■□□ 2.73
ATPAF1-201ENST00000329231 FERMT2Q96AC1 680 aa32.1■■■□□ 2.73
ATPAF1-201ENST00000329231 DDX49Q9Y6V7 483 aaKnown RBP32.1■■■□□ 2.73
ATPAF1-201ENST00000329231 CCDC69A6NI79 296 aa32.09■■■□□ 2.73
ATPAF1-201ENST00000329231 B4DLN1 442 aa32.09■■■□□ 2.73
ATPAF1-201ENST00000329231 KIF5BP33176 963 aa32.09■■■□□ 2.73
ATPAF1-201ENST00000329231 LIFRP42702 1097 aa32.09■■■□□ 2.73
ATPAF1-201ENST00000329231 MRPL12P52815 198 aaKnown RBP32.09■■■□□ 2.73
ATPAF1-201ENST00000329231 TRAF1Q13077 416 aa32.09■■■□□ 2.73
ATPAF1-201ENST00000329231 TSGA10IPQ3SY00 556 aa32.09■■■□□ 2.73
ATPAF1-201ENST00000329231 HABP4Q5JVS0 413 aaKnown RBP32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms