RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 PCDHA4Q9UN74 947 aa5.92□□□□□ -1.46
LRIT3-201ENST00000327908 PCDHA1Q9Y5I3 950 aa5.92□□□□□ -1.46
LRIT3-201ENST00000327908 SYNGAP1Q96PV0 1343 aa5.92□□□□□ -1.46
LRIT3-201ENST00000327908 CCDC194A0A1B0GVG4 234 aa5.92□□□□□ -1.46
LRIT3-201ENST00000327908 KPNA6O60684 536 aa5.92□□□□□ -1.46
LRIT3-201ENST00000327908 BAG4O95429 457 aaKnown RBP5.92□□□□□ -1.46
LRIT3-201ENST00000327908 CCND2P30279 289 aa5.92□□□□□ -1.46
LRIT3-201ENST00000327908 GJA5P36382 358 aa5.92□□□□□ -1.46
LRIT3-201ENST00000327908 SNRNP48Q6IEG0 339 aaKnown RBP5.92□□□□□ -1.46
LRIT3-201ENST00000327908 NSUN7Q8NE18 718 aaKnown RBP5.92□□□□□ -1.46
LRIT3-201ENST00000327908 NSUN6Q8TEA1 469 aaKnown RBP5.92□□□□□ -1.46
LRIT3-201ENST00000327908 ZMYND12Q9H0C1 365 aa5.92□□□□□ -1.46
LRIT3-201ENST00000327908 VTA1Q9NP79 307 aa5.92□□□□□ -1.46
LRIT3-201ENST00000327908 TPCN1Q9ULQ1 816 aa5.92□□□□□ -1.46
LRIT3-201ENST00000327908 PPME1Q9Y570 386 aa5.92□□□□□ -1.46
LRIT3-201ENST00000327908 POTEB2H3BUK9 544 aa5.92□□□□□ -1.46
LRIT3-201ENST00000327908 SEC24BO95487 1268 aa5.92□□□□□ -1.46
LRIT3-201ENST00000327908 USP11P51784 963 aa5.92□□□□□ -1.46
LRIT3-201ENST00000327908 UBXN2AP68543 259 aa5.92□□□□□ -1.46
LRIT3-201ENST00000327908 MOGSQ13724 837 aa5.92□□□□□ -1.46
LRIT3-201ENST00000327908 CYP4F22Q6NT55 531 aa5.92□□□□□ -1.46
LRIT3-201ENST00000327908 REXO1Q8N1G1 1221 aaKnown RBP5.92□□□□□ -1.46
LRIT3-201ENST00000327908 REPS2Q8NFH8 660 aa5.92□□□□□ -1.46
LRIT3-201ENST00000327908 RDM1Q8NG50 284 aa5.92□□□□□ -1.46
LRIT3-201ENST00000327908 ATG4CQ96DT6 458 aa5.92□□□□□ -1.46
LRIT3-201ENST00000327908 DDX11Q96FC9 970 aa5.92□□□□□ -1.46
LRIT3-201ENST00000327908 BRPF3Q9ULD4 1205 aa5.92□□□□□ -1.46
LRIT3-201ENST00000327908 HPS5Q9UPZ3 1129 aa5.92□□□□□ -1.46
LRIT3-201ENST00000327908 TBX3O15119 743 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 PTPREP23469 700 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 HSD17B4P51659 736 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 SCRN1Q12765 414 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 NONOQ15233 471 aaKnown RBP eCLIP5.91□□□□□ -1.46
LRIT3-201ENST00000327908 ME3Q16798 604 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 HEATR3Q7Z4Q2 680 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 CDAN1Q8IWY9 1227 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 PXYLP1Q8TE99 480 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 TRIM47Q96LD4 638 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 TRERF1Q96PN7 1200 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 P2RX7Q99572 595 aaKnown RBP5.91□□□□□ -1.46
LRIT3-201ENST00000327908 PSTPIP2Q9H939 334 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 FRMPD4Q14CM0 1322 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 GOLGA6L22H0YM25 854 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 TNPO2O14787 897 aaKnown RBP5.91□□□□□ -1.46
LRIT3-201ENST00000327908 ZEB2O60315 1214 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 ZYXQ15942 572 aaKnown RBP5.91□□□□□ -1.46
LRIT3-201ENST00000327908 RILPL1Q5EBL4 403 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 RNF207Q6ZRF8 634 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 KCTD1Q719H9 257 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 CCDC83Q8IWF9 413 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 BLIDQ8IZY5 108 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 ZNF710Q8N1W2 664 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 NEK9Q8TD19 979 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 GTPBP4Q9BZE4 634 aaKnown RBP5.91□□□□□ -1.46
LRIT3-201ENST00000327908 RNF186Q9NXI6 227 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 Q9Y3F1 56 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 CASP8AP2Q9UKL3 1982 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 FRMPD2Q68DX3 1309 aaPredicted RBP5.91□□□□□ -1.46
LRIT3-201ENST00000327908 GPR25O00155 361 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 STXBP3O00186 592 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 CYP3A4P08684 503 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 ALAS1P13196 640 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 MUTP22033 750 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 FUT2Q10981 343 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 MAP2K5Q13163 448 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 NTRK3Q16288 839 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 LARP1BQ659C4 914 aaKnown RBP5.91□□□□□ -1.46
LRIT3-201ENST00000327908 NCAPG2Q86XI2 1143 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 EXOC8Q8IYI6 725 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 ANKRD35Q8N283 1001 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 SRBD1Q8N5C6 995 aaKnown RBP5.91□□□□□ -1.46
LRIT3-201ENST00000327908 SPC25Q9HBM1 224 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 WBP1LQ9NX94 342 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 CHMP5Q9NZZ3 219 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 CFAP45Q9UL16 551 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 TACC3Q9Y6A5 838 aa5.91□□□□□ -1.46
LRIT3-201ENST00000327908 V9GY48 417 aaPredicted RBP5.91□□□□□ -1.46
LRIT3-201ENST00000327908 NMT2O60551 498 aa5.9□□□□□ -1.46
LRIT3-201ENST00000327908 TGFB3P10600 412 aa5.9□□□□□ -1.46
LRIT3-201ENST00000327908 GRB14Q14449 540 aa5.9□□□□□ -1.46
LRIT3-201ENST00000327908 MOB2Q70IA6 237 aa5.9□□□□□ -1.46
LRIT3-201ENST00000327908 NBPF11Q86T75 865 aa5.9□□□□□ -1.46
LRIT3-201ENST00000327908 MORC4Q8TE76 937 aa5.9□□□□□ -1.46
LRIT3-201ENST00000327908 GPRASP2Q96D09 838 aa5.9□□□□□ -1.46
LRIT3-201ENST00000327908 PIGSQ96S52 555 aa5.9□□□□□ -1.46
LRIT3-201ENST00000327908 PAGR1Q9BTK6 254 aa5.9□□□□□ -1.46
LRIT3-201ENST00000327908 PARP14Q460N5 1801 aa5.9□□□□□ -1.46
LRIT3-201ENST00000327908 SMCO2A6NFE2 343 aa5.9□□□□□ -1.46
LRIT3-201ENST00000327908 PLS1Q14651 629 aa5.9□□□□□ -1.46
LRIT3-201ENST00000327908 TMEM266Q2M3C6 531 aa5.9□□□□□ -1.46
LRIT3-201ENST00000327908 CTU1Q7Z7A3 348 aaKnown RBP5.9□□□□□ -1.46
LRIT3-201ENST00000327908 SLFN12Q8IYM2 578 aa5.9□□□□□ -1.46
LRIT3-201ENST00000327908 FBXO18Q8NFZ0 1043 aa5.9□□□□□ -1.46
LRIT3-201ENST00000327908 NKX2-3Q8TAU0 364 aa5.9□□□□□ -1.46
LRIT3-201ENST00000327908 MOV10L1Q9BXT6 1211 aaKnown RBP5.9□□□□□ -1.46
LRIT3-201ENST00000327908 LRRC2Q9BYS8 371 aa5.9□□□□□ -1.46
LRIT3-201ENST00000327908 ZNF214Q9UL59 606 aaPredicted RBP5.9□□□□□ -1.46
LRIT3-201ENST00000327908 MMP1P03956 469 aa5.9□□□□□ -1.47
LRIT3-201ENST00000327908 GJB2P29033 226 aa5.9□□□□□ -1.47
LRIT3-201ENST00000327908 CCT2P78371 535 aaKnown RBP5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms