RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 SLC8A3P57103 927 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 SEPT14Q6ZU15 432 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 SUPT20HQ8NEM7 779 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 C7orf43Q8WVR3 580 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 BORCS6Q96GS4 357 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 SELENOOQ9BVL4 669 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 PAG1Q9NWQ8 432 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 SOWAHDA6NJG2 315 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 A6NNZ2 444 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 DIAPH2O60879 1101 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 PFDN1O60925 122 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 FSBPO95073 299 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 KCNJ6P48051 423 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 IFFO1Q0D2I5 559 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 SCARF1Q14162 830 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 WASHC4Q2M389 1173 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 TUBB8Q3ZCM7 444 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 CFAP58Q5T655 872 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 TXNRD3Q86VQ6 643 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 RNF168Q8IYW5 571 aaPredicted RBP12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 DPF2Q92785 391 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 EDC3Q96F86 508 aaKnown RBP12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 STAMBPL1Q96FJ0 436 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 ZNF512BQ96KM6 892 aaPredicted RBP12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 TRPC6Q9Y210 931 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 MCAMP43121 646 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 ZAP70P43403 619 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 RASGRF1Q13972 1273 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 PI16Q6UXB8 463 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 FBXO33Q7Z6M2 555 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 SPATA5Q8NB90 893 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 LRRC2Q9BYS8 371 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 VCPKMTQ9H867 229 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 RGL1Q9NZL6 768 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 SYF2O95926 243 aaKnown RBP12.96□□□□□ -0.33
LDLRAD3-201ENST00000315571 ACCSLQ4AC99 568 aa12.96□□□□□ -0.33
LDLRAD3-201ENST00000315571 ACBD5Q5T8D3 534 aaPredicted RBP12.96□□□□□ -0.33
LDLRAD3-201ENST00000315571 IQCEQ6IPM2 695 aa12.96□□□□□ -0.33
LDLRAD3-201ENST00000315571 MED23Q9ULK4 1368 aa12.96□□□□□ -0.33
LDLRAD3-201ENST00000315571 HOOK2Q96ED9 719 aa12.96□□□□□ -0.33
LDLRAD3-201ENST00000315571 ACTR5Q9H9F9 607 aaPredicted RBP12.96□□□□□ -0.33
LDLRAD3-201ENST00000315571 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.96□□□□□ -0.33
LDLRAD3-201ENST00000315571 HMG20BQ9P0W2 317 aa12.96□□□□□ -0.33
LDLRAD3-201ENST00000315571 DENND2AQ9ULE3 1009 aa12.96□□□□□ -0.33
LDLRAD3-201ENST00000315571 AKR1B15C9JRZ8 316 aaPredicted RBP12.96□□□□□ -0.34
LDLRAD3-201ENST00000315571 DNA2P51530 1060 aa12.96□□□□□ -0.34
LDLRAD3-201ENST00000315571 CUL3Q13618 768 aa12.96□□□□□ -0.34
LDLRAD3-201ENST00000315571 INF2Q27J81 1249 aa12.96□□□□□ -0.34
LDLRAD3-201ENST00000315571 C15orf52Q6ZUT6 534 aaKnown RBP12.96□□□□□ -0.34
LDLRAD3-201ENST00000315571 ARHGAP22Q7Z5H3 698 aa12.96□□□□□ -0.34
LDLRAD3-201ENST00000315571 USP28Q96RU2 1077 aa12.96□□□□□ -0.34
LDLRAD3-201ENST00000315571 TBC1D1Q86TI0 1168 aaPredicted RBP12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 STK38LQ9Y2H1 464 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 SLX4Q8IY92 1834 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 hCG_2014768A0A024R1R8 64 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 BACH1O14867 736 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 SEMA3EO15041 775 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 RAB27AP51159 221 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 NNTQ13423 1086 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 TUBB2AQ13885 445 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 TTF1Q15361 905 aaPredicted RBP12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 ZRSR2Q15696 482 aaKnown RBP12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 SPATA21Q7Z572 469 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 TRIM42Q8IWZ5 723 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 CCDC63Q8NA47 563 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 MIPOL1Q8TD10 442 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 TUBB2BQ9BVA1 445 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 GOLPH3LQ9H4A5 285 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 AATFQ9NY61 560 aaKnown RBP eCLIP12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 L3MBTL1Q9Y468 752 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 CREB3O43889 395 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 PFKFB2O60825 505 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 SCNN1BP51168 640 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 INHBEP58166 350 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 NLRP12P59046 1061 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 SPECC1LQ69YQ0 1117 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 CACNA2D3Q8IZS8 1091 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 RASSF8Q8NHQ8 419 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 IFT81Q8WYA0 676 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 NUP88Q99567 741 aaPredicted RBP12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 MRPL44Q9H9J2 332 aaKnown RBP12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 KCND1Q9NSA2 647 aa12.95□□□□□ -0.34
LDLRAD3-201ENST00000315571 HGSO14964 777 aaPredicted RBP12.94□□□□□ -0.34
LDLRAD3-201ENST00000315571 CTCFP49711 727 aaPredicted RBP12.94□□□□□ -0.34
LDLRAD3-201ENST00000315571 LMNTD2Q8IXW0 634 aa12.94□□□□□ -0.34
LDLRAD3-201ENST00000315571 HOMER3Q9NSC5 361 aa12.94□□□□□ -0.34
LDLRAD3-201ENST00000315571 NOP53Q9NZM5 478 aaKnown RBP12.94□□□□□ -0.34
LDLRAD3-201ENST00000315571 RAB21Q9UL25 225 aa12.94□□□□□ -0.34
LDLRAD3-201ENST00000315571 KIF13BQ9NQT8 1826 aa12.94□□□□□ -0.34
LDLRAD3-201ENST00000315571 PPIP5K2O43314 1243 aa12.94□□□□□ -0.34
LDLRAD3-201ENST00000315571 ANP32DO95626 131 aa12.94□□□□□ -0.34
LDLRAD3-201ENST00000315571 PDHA1P08559 390 aa12.94□□□□□ -0.34
LDLRAD3-201ENST00000315571 MARCKSP29966 332 aaPredicted RBP12.94□□□□□ -0.34
LDLRAD3-201ENST00000315571 CNGA1P29973 690 aa12.94□□□□□ -0.34
LDLRAD3-201ENST00000315571 TAF11Q15544 211 aa12.94□□□□□ -0.34
LDLRAD3-201ENST00000315571 NAA35Q5VZE5 725 aa12.94□□□□□ -0.34
LDLRAD3-201ENST00000315571 FUKQ8N0W3 1084 aa12.94□□□□□ -0.34
LDLRAD3-201ENST00000315571 MSANTD4Q8NCY6 345 aa12.94□□□□□ -0.34
LDLRAD3-201ENST00000315571 ZNF473Q8WTR7 871 aaKnown RBP12.94□□□□□ -0.34
LDLRAD3-201ENST00000315571 BICD1Q96G01 975 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms