RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 PPATQ06203 517 aa25.69■■□□□ 1.7
IRF3-201ENST00000309877 GSE1Q14687 1217 aa25.69■■□□□ 1.7
IRF3-201ENST00000309877 SH3D19Q5HYK7 790 aa25.69■■□□□ 1.7
IRF3-201ENST00000309877 NEK8Q86SG6 692 aa25.69■■□□□ 1.7
IRF3-201ENST00000309877 TBCKQ8TEA7 893 aa25.69■■□□□ 1.7
IRF3-201ENST00000309877 TRAF5O00463 557 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 CLMNQ96JQ2 1002 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 ZNF408Q9H9D4 720 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 DDX19AQ9NUU7 478 aaKnown RBP25.68■■□□□ 1.7
IRF3-201ENST00000309877 DACT1Q9NYF0 836 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 MRPL11Q9Y3B7 192 aaKnown RBP25.68■■□□□ 1.7
IRF3-201ENST00000309877 USP17L15C9J2P7 530 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 USP17L13C9JLJ4 530 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 USP17L11C9JVI0 530 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 USP17L18D6R9N7 530 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 USP17L22D6RA61 530 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 USP17L17D6RBQ6 530 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 USP17L19D6RCP7 530 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 USP17L20D6RJB6 530 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 ZBED4O75132 1171 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 PTPREP23469 700 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 CMA1P23946 247 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 USP17L24Q0WX57 530 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 PTGDRQ13258 359 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 LETM2Q2VYF4 491 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 MCTP2Q6DN12 878 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 USP17L6PQ6QN14 398 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 CNKSR2Q8WXI2 1034 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 OTUD5Q96G74 571 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 GOLPH3LQ9H4A5 285 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 FBXO2Q9UK22 296 aaPredicted RBP25.68■■□□□ 1.7
IRF3-201ENST00000309877 SRPRBQ9Y5M8 271 aaKnown RBP25.68■■□□□ 1.7
IRF3-201ENST00000309877 PHIPQ8WWQ0 1821 aa25.68■■□□□ 1.7
IRF3-201ENST00000309877 NR1I2O75469 434 aa25.67■■□□□ 1.7
IRF3-201ENST00000309877 FDX1P10109 184 aa25.67■■□□□ 1.7
IRF3-201ENST00000309877 TAL1P17542 331 aaPredicted RBP25.67■■□□□ 1.7
IRF3-201ENST00000309877 CLIC6Q96NY7 704 aa25.67■■□□□ 1.7
IRF3-201ENST00000309877 ABCB11O95342 1321 aa25.67■■□□□ 1.7
IRF3-201ENST00000309877 SPDYE5A6NIY4 337 aa25.66■■□□□ 1.7
IRF3-201ENST00000309877 ICAM1P05362 532 aa25.66■■□□□ 1.7
IRF3-201ENST00000309877 ATP2C1P98194 919 aaPredicted RBP25.66■■□□□ 1.7
IRF3-201ENST00000309877 FAM160A1Q05DH4 1040 aa25.66■■□□□ 1.7
IRF3-201ENST00000309877 ZNF526Q8TF50 670 aaPredicted RBP25.66■■□□□ 1.7
IRF3-201ENST00000309877 SLC38A10Q9HBR0 1119 aa25.66■■□□□ 1.7
IRF3-201ENST00000309877 NMRK2Q9NPI5 230 aa25.66■■□□□ 1.7
IRF3-201ENST00000309877 CCPG1Q9ULG6 757 aa25.66■■□□□ 1.7
IRF3-201ENST00000309877 A0A1B0GVL5 298 aa25.65■■□□□ 1.7
IRF3-201ENST00000309877 CCNT1O60563 726 aaKnown RBP25.65■■□□□ 1.7
IRF3-201ENST00000309877 AP3B2Q13367 1082 aa25.65■■□□□ 1.7
IRF3-201ENST00000309877 FERMT2Q96AC1 680 aa25.65■■□□□ 1.7
IRF3-201ENST00000309877 MRVI1Q9Y6F6 885 aa25.65■■□□□ 1.7
IRF3-201ENST00000309877 PAPPA2Q9BXP8 1791 aa25.65■■□□□ 1.7
IRF3-201ENST00000309877 OTOFQ9HC10 1997 aa25.65■■□□□ 1.7
IRF3-201ENST00000309877 MEIS2O14770 477 aa25.64■■□□□ 1.7
IRF3-201ENST00000309877 LETM1O95202 739 aaPredicted RBP25.64■■□□□ 1.7
IRF3-201ENST00000309877 CATSPERGQ6ZRH7 1159 aa25.64■■□□□ 1.7
IRF3-201ENST00000309877 TEX2Q8IWB9 1127 aa25.64■■□□□ 1.7
IRF3-201ENST00000309877 AGBL1Q96MI9 1066 aa25.64■■□□□ 1.7
IRF3-201ENST00000309877 NUP62CLQ9H1M0 184 aa25.64■■□□□ 1.7
IRF3-201ENST00000309877 PNMA2Q9UL42 364 aa25.64■■□□□ 1.7
IRF3-201ENST00000309877 CXCL11O14625 94 aa25.64■■□□□ 1.69
IRF3-201ENST00000309877 FMR1Q06787 632 aaKnown RBP eCLIP25.64■■□□□ 1.69
IRF3-201ENST00000309877 COG2Q14746 738 aa25.64■■□□□ 1.69
IRF3-201ENST00000309877 LDLRAD1Q5T700 205 aa25.64■■□□□ 1.69
IRF3-201ENST00000309877 SHC4Q6S5L8 630 aa25.64■■□□□ 1.69
IRF3-201ENST00000309877 CPXCR1Q8N123 301 aa25.64■■□□□ 1.69
IRF3-201ENST00000309877 ZNF579Q8NAF0 562 aaKnown RBP25.64■■□□□ 1.69
IRF3-201ENST00000309877 ATG4CQ96DT6 458 aa25.64■■□□□ 1.69
IRF3-201ENST00000309877 ZNF536O15090 1300 aa25.64■■□□□ 1.69
IRF3-201ENST00000309877 IRF6O14896 467 aa25.63■■□□□ 1.69
IRF3-201ENST00000309877 FOSP01100 380 aaPredicted RBP25.63■■□□□ 1.69
IRF3-201ENST00000309877 DSG3P32926 999 aa25.63■■□□□ 1.69
IRF3-201ENST00000309877 NDUFA8P51970 172 aa25.63■■□□□ 1.69
IRF3-201ENST00000309877 PPIL2Q13356 520 aa25.63■■□□□ 1.69
IRF3-201ENST00000309877 ORC2Q13416 577 aaPredicted RBP25.63■■□□□ 1.69
IRF3-201ENST00000309877 RESP18Q5W5W9 173 aa25.63■■□□□ 1.69
IRF3-201ENST00000309877 ANO3Q9BYT9 981 aa25.63■■□□□ 1.69
IRF3-201ENST00000309877 RAVER2Q9HCJ3 691 aaKnown RBP25.63■■□□□ 1.69
IRF3-201ENST00000309877 SYCE3A1L190 88 aa25.62■■□□□ 1.69
IRF3-201ENST00000309877 SPDYE3A6NKU9 549 aa25.62■■□□□ 1.69
IRF3-201ENST00000309877 VWA5AO00534 786 aa25.62■■□□□ 1.69
IRF3-201ENST00000309877 OPLAHO14841 1288 aa25.62■■□□□ 1.69
IRF3-201ENST00000309877 KINO60870 393 aaKnown RBP25.62■■□□□ 1.69
IRF3-201ENST00000309877 SNW1Q13573 536 aaKnown RBP25.62■■□□□ 1.69
IRF3-201ENST00000309877 GADL1Q6ZQY3 521 aa25.62■■□□□ 1.69
IRF3-201ENST00000309877 ENGASEQ8NFI3 743 aa25.62■■□□□ 1.69
IRF3-201ENST00000309877 OPTNQ96CV9 577 aa25.62■■□□□ 1.69
IRF3-201ENST00000309877 SLC10A4Q96EP9 437 aa25.62■■□□□ 1.69
IRF3-201ENST00000309877 HOXC10Q9NYD6 342 aa25.62■■□□□ 1.69
IRF3-201ENST00000309877 FAM13BQ9NYF5 915 aa25.62■■□□□ 1.69
IRF3-201ENST00000309877 UNCXA6NJT0 531 aa25.61■■□□□ 1.69
IRF3-201ENST00000309877 GCOM1H8Y6P7 765 aaPredicted RBP25.61■■□□□ 1.69
IRF3-201ENST00000309877 PIK3CDO00329 1044 aa25.61■■□□□ 1.69
IRF3-201ENST00000309877 LAD1O00515 517 aa25.61■■□□□ 1.69
IRF3-201ENST00000309877 CFBP00751 764 aa25.61■■□□□ 1.69
IRF3-201ENST00000309877 POLR2MP0CAP2 368 aa25.61■■□□□ 1.69
IRF3-201ENST00000309877 PFKFB1P16118 471 aa25.61■■□□□ 1.69
IRF3-201ENST00000309877 ZNF445P59923 1031 aa25.61■■□□□ 1.69
IRF3-201ENST00000309877 GRIN1Q05586 938 aa25.61■■□□□ 1.69
IRF3-201ENST00000309877 ARL6IP4Q66PJ3 421 aaKnown RBP25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms