RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 CYP2C9P11712 490 aa14.22□□□□□ -0.13
SMIM4-201ENST00000307106 CNTN2Q02246 1040 aa14.22□□□□□ -0.13
SMIM4-201ENST00000307106 CSPP1Q1MSJ5 1256 aa14.22□□□□□ -0.13
SMIM4-201ENST00000307106 SPRED2Q7Z698 418 aa14.22□□□□□ -0.13
SMIM4-201ENST00000307106 AACSQ86V21 672 aa14.22□□□□□ -0.13
SMIM4-201ENST00000307106 HERC6Q8IVU3 1022 aa14.22□□□□□ -0.13
SMIM4-201ENST00000307106 GJD3Q8N144 294 aa14.22□□□□□ -0.13
SMIM4-201ENST00000307106 FRAT1Q92837 279 aaPredicted RBP14.22□□□□□ -0.13
SMIM4-201ENST00000307106 KIFC2Q96AC6 838 aa14.22□□□□□ -0.13
SMIM4-201ENST00000307106 C1orf115Q9H7X2 142 aa14.22□□□□□ -0.13
SMIM4-201ENST00000307106 TRMT13Q9NUP7 481 aaKnown RBP14.22□□□□□ -0.13
SMIM4-201ENST00000307106 TNKSO95271 1327 aa14.21□□□□□ -0.13
SMIM4-201ENST00000307106 F5H6K3 240 aa14.21□□□□□ -0.13
SMIM4-201ENST00000307106 MBD4O95243 580 aa14.21□□□□□ -0.13
SMIM4-201ENST00000307106 NDUFB10O96000 172 aa14.21□□□□□ -0.13
SMIM4-201ENST00000307106 SUPT20HL2P0C7V6 817 aa14.21□□□□□ -0.13
SMIM4-201ENST00000307106 SMPD1P17405 629 aa14.21□□□□□ -0.13
SMIM4-201ENST00000307106 KLRC3Q07444 240 aa14.21□□□□□ -0.13
SMIM4-201ENST00000307106 FAM178BQ8IXR5 827 aa14.21□□□□□ -0.13
SMIM4-201ENST00000307106 FAM133AQ8N9E0 248 aa14.21□□□□□ -0.13
SMIM4-201ENST00000307106 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.21□□□□□ -0.13
SMIM4-201ENST00000307106 SLC38A10Q9HBR0 1119 aa14.21□□□□□ -0.13
SMIM4-201ENST00000307106 HOMER2Q9NSB8 354 aa14.21□□□□□ -0.13
SMIM4-201ENST00000307106 ATG2AQ2TAZ0 1938 aa14.2□□□□□ -0.14
SMIM4-201ENST00000307106 ASB14A6NK59 587 aa14.2□□□□□ -0.14
SMIM4-201ENST00000307106 GOLIM4O00461 696 aa14.2□□□□□ -0.14
SMIM4-201ENST00000307106 ALADP13716 330 aa14.2□□□□□ -0.14
SMIM4-201ENST00000307106 SSTR3P32745 418 aaPredicted RBP14.2□□□□□ -0.14
SMIM4-201ENST00000307106 RFC2P35250 354 aa14.2□□□□□ -0.14
SMIM4-201ENST00000307106 OAZ1P54368 228 aa14.2□□□□□ -0.14
SMIM4-201ENST00000307106 TMEM57Q8N5G2 664 aa14.2□□□□□ -0.14
SMIM4-201ENST00000307106 GDPD5Q8WTR4 605 aa14.2□□□□□ -0.14
SMIM4-201ENST00000307106 DDRGK1Q96HY6 314 aa14.2□□□□□ -0.14
SMIM4-201ENST00000307106 FBXL18Q96ME1 805 aa14.2□□□□□ -0.14
SMIM4-201ENST00000307106 DNAJC2Q99543 621 aaKnown RBP14.2□□□□□ -0.14
SMIM4-201ENST00000307106 UBE2ZQ9H832 354 aaPredicted RBP14.2□□□□□ -0.14
SMIM4-201ENST00000307106 LMCD1Q9NZU5 365 aa14.2□□□□□ -0.14
SMIM4-201ENST00000307106 Q9Y3F1 56 aa14.2□□□□□ -0.14
SMIM4-201ENST00000307106 SOWAHBA6NEL2 793 aa14.19□□□□□ -0.14
SMIM4-201ENST00000307106 SLFNL1Q499Z3 407 aa14.19□□□□□ -0.14
SMIM4-201ENST00000307106 IQSEC1Q6DN90 963 aa14.19□□□□□ -0.14
SMIM4-201ENST00000307106 EEPD1Q7L9B9 569 aa14.19□□□□□ -0.14
SMIM4-201ENST00000307106 FTOQ9C0B1 505 aaKnown RBP eCLIP14.19□□□□□ -0.14
SMIM4-201ENST00000307106 KCNH6Q9H252 994 aa14.19□□□□□ -0.14
SMIM4-201ENST00000307106 ACAD9Q9H845 621 aa14.19□□□□□ -0.14
SMIM4-201ENST00000307106 PDGFCQ9NRA1 345 aa14.19□□□□□ -0.14
SMIM4-201ENST00000307106 MICAL3Q7RTP6 2002 aa14.19□□□□□ -0.14
SMIM4-201ENST00000307106 ZNF536O15090 1300 aa14.18□□□□□ -0.14
SMIM4-201ENST00000307106 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.18□□□□□ -0.14
SMIM4-201ENST00000307106 IQCF3P0C7M6 154 aa14.18□□□□□ -0.14
SMIM4-201ENST00000307106 IL9P15248 144 aa14.18□□□□□ -0.14
SMIM4-201ENST00000307106 KCNA5P22460 613 aa14.18□□□□□ -0.14
SMIM4-201ENST00000307106 LEXMQ3ZCV2 418 aa14.18□□□□□ -0.14
SMIM4-201ENST00000307106 TMEM63BQ5T3F8 832 aa14.18□□□□□ -0.14
SMIM4-201ENST00000307106 ERC1Q8IUD2 1116 aa14.18□□□□□ -0.14
SMIM4-201ENST00000307106 FBXO16Q8IX29 292 aaPredicted RBP14.18□□□□□ -0.14
SMIM4-201ENST00000307106 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.18□□□□□ -0.14
SMIM4-201ENST00000307106 A1CFQ9NQ94 594 aaKnown RBP14.18□□□□□ -0.14
SMIM4-201ENST00000307106 NYAP2Q9P242 653 aa14.18□□□□□ -0.14
SMIM4-201ENST00000307106 FEM1BQ9UK73 627 aa14.18□□□□□ -0.14
SMIM4-201ENST00000307106 COG6Q9Y2V7 657 aa14.18□□□□□ -0.14
SMIM4-201ENST00000307106 DDX49Q9Y6V7 483 aaKnown RBP14.18□□□□□ -0.14
SMIM4-201ENST00000307106 ZBED9Q6R2W3 1325 aa14.17□□□□□ -0.14
SMIM4-201ENST00000307106 LCHNA4D1U4 455 aa14.17□□□□□ -0.14
SMIM4-201ENST00000307106 BAIAP3O94812 1187 aa14.17□□□□□ -0.14
SMIM4-201ENST00000307106 ADD2P35612 726 aa14.17□□□□□ -0.14
SMIM4-201ENST00000307106 FAM47CQ5HY64 1035 aa14.17□□□□□ -0.14
SMIM4-201ENST00000307106 TAPT1Q6NXT6 567 aa14.17□□□□□ -0.14
SMIM4-201ENST00000307106 CTR9Q6PD62 1173 aa14.17□□□□□ -0.14
SMIM4-201ENST00000307106 RETREG2Q8NC44 543 aa14.17□□□□□ -0.14
SMIM4-201ENST00000307106 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.17□□□□□ -0.14
SMIM4-201ENST00000307106 IL1RAPL2Q9NP60 686 aa14.17□□□□□ -0.14
SMIM4-201ENST00000307106 RNF146Q9NTX7 359 aa14.17□□□□□ -0.14
SMIM4-201ENST00000307106 POLR3EQ9NVU0 708 aa14.17□□□□□ -0.14
SMIM4-201ENST00000307106 EXOC6BQ9Y2D4 811 aa14.17□□□□□ -0.14
SMIM4-201ENST00000307106 MYH7BA7E2Y1 1941 aa14.16□□□□□ -0.14
SMIM4-201ENST00000307106 PITPNM1O00562 1244 aa14.16□□□□□ -0.14
SMIM4-201ENST00000307106 RASA1P20936 1047 aa14.16□□□□□ -0.14
SMIM4-201ENST00000307106 KCNJ6P48051 423 aa14.16□□□□□ -0.14
SMIM4-201ENST00000307106 PTCRAQ6ISU1 281 aaPredicted RBP14.16□□□□□ -0.14
SMIM4-201ENST00000307106 KIAA1211Q6ZU35 1233 aa14.16□□□□□ -0.14
SMIM4-201ENST00000307106 SUGCTQ9HAC7 445 aa14.16□□□□□ -0.14
SMIM4-201ENST00000307106 CLIP2Q9UDT6 1046 aa14.16□□□□□ -0.14
SMIM4-201ENST00000307106 MTUS1Q9ULD2 1270 aa14.16□□□□□ -0.14
SMIM4-201ENST00000307106 SLC4A4Q9Y6R1 1079 aa14.16□□□□□ -0.14
SMIM4-201ENST00000307106 RALGAPA2Q2PPJ7 1873 aa14.16□□□□□ -0.14
SMIM4-201ENST00000307106 DCXO43602 365 aa14.15□□□□□ -0.14
SMIM4-201ENST00000307106 MYL3P08590 195 aa14.15□□□□□ -0.14
SMIM4-201ENST00000307106 PURAQ00577 322 aaKnown RBP14.15□□□□□ -0.14
SMIM4-201ENST00000307106 TMCO2Q7Z6W1 182 aaPredicted RBP14.15□□□□□ -0.14
SMIM4-201ENST00000307106 STK11IPQ8N1F8 1099 aa14.15□□□□□ -0.14
SMIM4-201ENST00000307106 ZBED2Q9BTP6 218 aa14.15□□□□□ -0.14
SMIM4-201ENST00000307106 MKNK2Q9HBH9 465 aa14.15□□□□□ -0.14
SMIM4-201ENST00000307106 ARPP21Q9UBL0 812 aaPredicted RBP14.15□□□□□ -0.14
SMIM4-201ENST00000307106 KIAA1217Q5T5P2 1943 aa14.15□□□□□ -0.14
SMIM4-201ENST00000307106 GRXCR2A6NFK2 248 aa14.14□□□□□ -0.15
SMIM4-201ENST00000307106 FDX1P10109 184 aa14.14□□□□□ -0.15
SMIM4-201ENST00000307106 CPT1AP50416 773 aa14.14□□□□□ -0.15
SMIM4-201ENST00000307106 WDR5P61964 334 aaKnown RBP14.14□□□□□ -0.15
SMIM4-201ENST00000307106 DUSP28Q4G0W2 176 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms