RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 EEF2KMTQ96G04 330 aa18.02■□□□□ 0.48
BRD3-201ENST00000303407 INO80Q9ULG1 1556 aaPredicted RBP18.02■□□□□ 0.48
BRD3-201ENST00000303407 TNNI1P19237 187 aa18.02■□□□□ 0.48
BRD3-201ENST00000303407 TBCKQ8TEA7 893 aa18.02■□□□□ 0.48
BRD3-201ENST00000303407 DHTKD1Q96HY7 919 aaPredicted RBP18.02■□□□□ 0.48
BRD3-201ENST00000303407 COL4A3BPQ9Y5P4 624 aa18.02■□□□□ 0.48
BRD3-201ENST00000303407 RFX7Q2KHR2 1363 aa18.02■□□□□ 0.48
BRD3-201ENST00000303407 PPARDQ03181 441 aa18.02■□□□□ 0.47
BRD3-201ENST00000303407 THRAP3Q9Y2W1 955 aaKnown RBP18.02■□□□□ 0.47
BRD3-201ENST00000303407 FAM169AQ9Y6X4 670 aa18.02■□□□□ 0.47
BRD3-201ENST00000303407 PALLDQ8WX93 1383 aa18.01■□□□□ 0.47
BRD3-201ENST00000303407 GTF2A1P52655 376 aaPredicted RBP18.01■□□□□ 0.47
BRD3-201ENST00000303407 GOLGA5Q8TBA6 731 aa18.01■□□□□ 0.47
BRD3-201ENST00000303407 P2RX5Q93086 422 aa18.01■□□□□ 0.47
BRD3-201ENST00000303407 IWS1Q96ST2 819 aa18.01■□□□□ 0.47
BRD3-201ENST00000303407 CYP2E1P05181 493 aaPredicted RBP18.01■□□□□ 0.47
BRD3-201ENST00000303407 GUCY2FP51841 1108 aa18.01■□□□□ 0.47
BRD3-201ENST00000303407 PPFIA1Q13136 1202 aa18.01■□□□□ 0.47
BRD3-201ENST00000303407 GPATCH4Q5T3I0 446 aaKnown RBP18.01■□□□□ 0.47
BRD3-201ENST00000303407 DCUN1D2Q6PH85 259 aa18.01■□□□□ 0.47
BRD3-201ENST00000303407 STAG1Q8WVM7 1258 aa18.01■□□□□ 0.47
BRD3-201ENST00000303407 PAGE5Q96GU1 130 aa18.01■□□□□ 0.47
BRD3-201ENST00000303407 SRP68Q9UHB9 627 aaKnown RBP18.01■□□□□ 0.47
BRD3-201ENST00000303407 ZC3H13Q5T200 1668 aaKnown RBP18.01■□□□□ 0.47
BRD3-201ENST00000303407 IQSEC2Q5JU85 1478 aa18.01■□□□□ 0.47
BRD3-201ENST00000303407 CYB5R4Q7L1T6 521 aa18.01■□□□□ 0.47
BRD3-201ENST00000303407 AS3MTQ9HBK9 375 aa18.01■□□□□ 0.47
BRD3-201ENST00000303407 EEF1GP26641 437 aaKnown RBP18.01■□□□□ 0.47
BRD3-201ENST00000303407 FAM178BQ8IXR5 827 aa18.01■□□□□ 0.47
BRD3-201ENST00000303407 SAMSN1Q9NSI8 373 aaKnown RBP18.01■□□□□ 0.47
BRD3-201ENST00000303407 RWDD2AQ9UIY3 292 aa18.01■□□□□ 0.47
BRD3-201ENST00000303407 SORBS3O60504 671 aa18.01■□□□□ 0.47
BRD3-201ENST00000303407 KRT19P08727 400 aa18.01■□□□□ 0.47
BRD3-201ENST00000303407 CYP4A11Q02928 519 aa18.01■□□□□ 0.47
BRD3-201ENST00000303407 PTPROQ16827 1216 aa18.01■□□□□ 0.47
BRD3-201ENST00000303407 SMC6Q96SB8 1091 aa18.01■□□□□ 0.47
BRD3-201ENST00000303407 DDX41Q9UJV9 622 aaKnown RBP18.01■□□□□ 0.47
BRD3-201ENST00000303407 SERPINA10Q9UK55 444 aa18.01■□□□□ 0.47
BRD3-201ENST00000303407 RABGAP1Q9Y3P9 1069 aa18.01■□□□□ 0.47
BRD3-201ENST00000303407 NEXMIFQ5QGS0 1516 aa18■□□□□ 0.47
BRD3-201ENST00000303407 A6NNZ2 444 aa18■□□□□ 0.47
BRD3-201ENST00000303407 PLEKHA8P1O95397 391 aa18■□□□□ 0.47
BRD3-201ENST00000303407 TUBB8Q3ZCM7 444 aa18■□□□□ 0.47
BRD3-201ENST00000303407 E7EVH7 732 aa18■□□□□ 0.47
BRD3-201ENST00000303407 SLC16A2P36021 539 aa18■□□□□ 0.47
BRD3-201ENST00000303407 RESP18Q5W5W9 173 aa18■□□□□ 0.47
BRD3-201ENST00000303407 CEP57Q86XR8 500 aa18■□□□□ 0.47
BRD3-201ENST00000303407 FAM204AQ9H8W3 233 aa18■□□□□ 0.47
BRD3-201ENST00000303407 DLC1Q96QB1 1528 aa18■□□□□ 0.47
BRD3-201ENST00000303407 FAM182BQ5T319 152 aa18■□□□□ 0.47
BRD3-201ENST00000303407 TTC16Q8NEE8 873 aa18■□□□□ 0.47
BRD3-201ENST00000303407 RAB17Q9H0T7 212 aa18■□□□□ 0.47
BRD3-201ENST00000303407 USP17L3A6NCW0 530 aa18■□□□□ 0.47
BRD3-201ENST00000303407 USP17L4A6NCW7 530 aa18■□□□□ 0.47
BRD3-201ENST00000303407 XKR9Q5GH70 373 aa18■□□□□ 0.47
BRD3-201ENST00000303407 USP17L1Q7RTZ2 530 aa18■□□□□ 0.47
BRD3-201ENST00000303407 MCF2L2Q86YR7 1114 aa18■□□□□ 0.47
BRD3-201ENST00000303407 VSTM4Q8IW00 320 aa18■□□□□ 0.47
BRD3-201ENST00000303407 SLC35F6Q8N357 371 aa18■□□□□ 0.47
BRD3-201ENST00000303407 AMNQ9BXJ7 453 aa18■□□□□ 0.47
BRD3-201ENST00000303407 RASSF4Q9H2L5 321 aa18■□□□□ 0.47
BRD3-201ENST00000303407 RPAP1Q9BWH6 1393 aaPredicted RBP18■□□□□ 0.47
BRD3-201ENST00000303407 PABPN1LA6NDY0 278 aaKnown RBP17.99■□□□□ 0.47
BRD3-201ENST00000303407 INTS8Q75QN2 995 aaKnown RBP17.99■□□□□ 0.47
BRD3-201ENST00000303407 DEPTORQ8TB45 409 aa17.99■□□□□ 0.47
BRD3-201ENST00000303407 CCDC17Q96LX7 622 aa17.99■□□□□ 0.47
BRD3-201ENST00000303407 METTL14Q9HCE5 456 aaKnown RBP17.99■□□□□ 0.47
BRD3-201ENST00000303407 PLCB1Q9NQ66 1216 aa17.99■□□□□ 0.47
BRD3-201ENST00000303407 hCG_1984214I3L0E3 225 aa17.99■□□□□ 0.47
BRD3-201ENST00000303407 FOSP01100 380 aaPredicted RBP17.99■□□□□ 0.47
BRD3-201ENST00000303407 TNFAIP1Q13829 316 aa17.99■□□□□ 0.47
BRD3-201ENST00000303407 TAOK1Q7L7X3 1001 aa17.99■□□□□ 0.47
BRD3-201ENST00000303407 NLGN1Q8N2Q7 840 aa17.99■□□□□ 0.47
BRD3-201ENST00000303407 ZNF713Q8N859 430 aaPredicted RBP17.99■□□□□ 0.47
BRD3-201ENST00000303407 EPSTI1Q96J88 318 aa17.99■□□□□ 0.47
BRD3-201ENST00000303407 GOLPH3LQ9H4A5 285 aa17.99■□□□□ 0.47
BRD3-201ENST00000303407 GJB4Q9NTQ9 266 aa17.99■□□□□ 0.47
BRD3-201ENST00000303407 KRIT1O00522 736 aa17.99■□□□□ 0.47
BRD3-201ENST00000303407 N4BP1O75113 896 aaKnown RBP17.99■□□□□ 0.47
BRD3-201ENST00000303407 CA8P35219 290 aa17.99■□□□□ 0.47
BRD3-201ENST00000303407 CCDC14Q49A88 953 aa17.99■□□□□ 0.47
BRD3-201ENST00000303407 TNS3Q68CZ2 1445 aa17.99■□□□□ 0.47
BRD3-201ENST00000303407 ENOX1Q8TC92 643 aaKnown RBP17.99■□□□□ 0.47
BRD3-201ENST00000303407 PHLPP2Q6ZVD8 1323 aa17.99■□□□□ 0.47
BRD3-201ENST00000303407 DIXDC1Q155Q3 683 aa17.99■□□□□ 0.47
BRD3-201ENST00000303407 SYNE4Q8N205 404 aa17.99■□□□□ 0.47
BRD3-201ENST00000303407 COA7Q96BR5 231 aa17.99■□□□□ 0.47
BRD3-201ENST00000303407 CDC25AP30304 524 aa17.98■□□□□ 0.47
BRD3-201ENST00000303407 USP17L2Q6R6M4 530 aa17.98■□□□□ 0.47
BRD3-201ENST00000303407 KIF2CQ99661 725 aa17.98■□□□□ 0.47
BRD3-201ENST00000303407 LRRC41Q15345 812 aa17.98■□□□□ 0.47
BRD3-201ENST00000303407 BRIP1Q9BX63 1249 aa17.98■□□□□ 0.47
BRD3-201ENST00000303407 ZNF335Q9H4Z2 1342 aaPredicted RBP17.98■□□□□ 0.47
BRD3-201ENST00000303407 SLC8A3P57103 927 aa17.98■□□□□ 0.47
BRD3-201ENST00000303407 FOXO4P98177 505 aa17.98■□□□□ 0.47
BRD3-201ENST00000303407 RASSF7Q02833 373 aa17.98■□□□□ 0.47
BRD3-201ENST00000303407 PPP1R21Q6ZMI0 780 aa17.98■□□□□ 0.47
BRD3-201ENST00000303407 CROCCP2Q86T23 111 aa17.98■□□□□ 0.47
BRD3-201ENST00000303407 SPICE1Q8N0Z3 855 aa17.98■□□□□ 0.47
BRD3-201ENST00000303407 CCPG1Q9ULG6 757 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms