RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 NCAPG2Q86XI2 1143 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 APOBRQ0VD83 1088 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 ASPHQ12797 758 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 LZICQ8WZA0 190 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 GPATCH8Q9UKJ3 1502 aaKnown RBP12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 XPOTO43592 962 aaKnown RBP12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 KAZNQ674X7 775 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 CNNM4Q6P4Q7 775 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 CHMP6Q96FZ7 201 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 TTC1Q99614 292 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 DESI2Q9BSY9 194 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 S100A5P33763 92 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 CUL3Q13618 768 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 RHPN1Q8TCX5 695 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 RIC8AQ9NPQ8 531 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 CD109Q6YHK3 1445 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 LZTS3O60299 673 aaPredicted RBP12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 TSPAN9O75954 239 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 ESPL1Q14674 2120 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 ERBB4Q15303 1308 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 KRIT1O00522 736 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 TJAP1Q5JTD0 557 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 TNNQ9UQP3 1299 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 GID8Q9NWU2 228 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 ZBTB43O43298 467 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 STRN3Q13033 797 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 RNF217Q8TC41 542 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 RPGRQ92834 1020 aaKnown RBP12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 IFIH1Q9BYX4 1025 aaKnown RBP12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 SNX5Q9Y5X3 404 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 MTRF1O75570 445 aaKnown RBP12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 OMA1Q96E52 524 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 ASCC3Q8N3C0 2202 aaKnown RBP12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 A0A1B0GVL5 298 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 DMPKQ09013 629 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 WASHC5Q12768 1159 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 HIF1AQ16665 826 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 CC2D2BQ6DHV5 1058 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 CARD10Q9BWT7 1032 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 SMYD2Q9NRG4 433 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 ARHGAP26Q9UNA1 814 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 SERPINB1P30740 379 aa12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 PRPF38AQ8NAV1 312 aaKnown RBP12.15□□□□□ -0.46
HDGFL3-201ENST00000299633 STAT2P52630 851 aa12.15□□□□□ -0.47
HDGFL3-201ENST00000299633 AEBP2Q6ZN18 517 aaPredicted RBP12.15□□□□□ -0.47
HDGFL3-201ENST00000299633 CHST3Q7LGC8 479 aa12.15□□□□□ -0.47
HDGFL3-201ENST00000299633 USTQ9Y2C2 406 aa12.15□□□□□ -0.47
HDGFL3-201ENST00000299633 MAGEA9P43362 315 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 SLC12A1Q13621 1099 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 CASP10Q92851 521 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 TRAF3IP3Q9Y228 551 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 CD2APQ9Y5K6 639 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 TRAF5O00463 557 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 KIAA0556O60303 1618 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 BFSP1Q12934 665 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 MTX1Q13505 466 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 NFRKBQ6P4R8 1299 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 NAF1Q96HR8 494 aaKnown RBP12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 ZFYVE19Q96K21 471 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 PRG3Q9Y2Y8 225 aaPredicted RBP12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 SPTLC2O15270 562 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 ZNF653Q96CK0 615 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 KIF11P52732 1056 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 STX3Q13277 289 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 SLC44A4Q53GD3 710 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 RFWD2Q8NHY2 731 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 NCAPH2Q6IBW4 605 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 CDH24Q86UP0 819 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 FNBP1Q96RU3 617 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 CYTH2Q99418 400 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 TMA7Q9Y2S6 64 aaKnown RBP12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 TTI1O43156 1089 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 BAG3O95817 575 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 LONRF2Q1L5Z9 754 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 FAM170AA1A519 330 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 CCDC78A2IDD5 438 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 PYGBP11216 843 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 CALML3P27482 149 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 APBA1Q02410 837 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 TTLL12Q14166 644 aaPredicted RBP12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 MRPL50Q8N5N7 158 aaKnown RBP12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 PEG3Q9GZU2 1588 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 EIF3CLB5ME19 914 aaKnown RBP12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 NBPF9Q3BBW0 867 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 DONSONQ9NYP3 566 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 WDR62O43379 1518 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 SPDYE16A6NNV3 312 aaPredicted RBP12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 BFSP2Q13515 415 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 SPDYE2Q495Y8 402 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 RARS2Q5T160 578 aaKnown RBP12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 KLC2Q9H0B6 622 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 PTPRKQ15262 1439 aa12.14□□□□□ -0.47
HDGFL3-201ENST00000299633 FAM95CA0A1B0GW59 222 aa12.13□□□□□ -0.47
HDGFL3-201ENST00000299633 SAT1P21673 171 aa12.13□□□□□ -0.47
HDGFL3-201ENST00000299633 AK2P54819 239 aa12.13□□□□□ -0.47
HDGFL3-201ENST00000299633 CHAMP1Q96JM3 812 aa12.13□□□□□ -0.47
HDGFL3-201ENST00000299633 SERPINB2P05120 415 aa12.13□□□□□ -0.47
HDGFL3-201ENST00000299633 SIKE1Q9BRV8 207 aa12.13□□□□□ -0.47
HDGFL3-201ENST00000299633 MAP4P27816 1152 aaKnown RBP12.13□□□□□ -0.47
HDGFL3-201ENST00000299633 BIRC3Q13489 604 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms