RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 PDHA1P08559 390 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 TMTC4Q5T4D3 741 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 PHACTR3Q96KR7 559 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 CALR3Q96L12 384 aaKnown RBP16.19■□□□□ 0.18
SCN3B-201ENST00000299333 CEP19Q96LK0 163 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 TRIM56Q9BRZ2 755 aaKnown RBP16.19■□□□□ 0.18
SCN3B-201ENST00000299333 HP1BP3Q5SSJ5 553 aaPredicted RBP16.19■□□□□ 0.18
SCN3B-201ENST00000299333 CYP4F22Q6NT55 531 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 C16orf87Q6PH81 154 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 TRMT10CQ7L0Y3 403 aaKnown RBP16.19■□□□□ 0.18
SCN3B-201ENST00000299333 GPBP1Q86WP2 473 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 TRIM50Q86XT4 487 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 DZIP3Q86Y13 1208 aaKnown RBP16.19■□□□□ 0.18
SCN3B-201ENST00000299333 TRIML1Q8N9V2 468 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 EEF2KMTQ96G04 330 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 XAGE2Q96GT9 111 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 EFHD1Q9BUP0 239 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 PACSIN2Q9UNF0 486 aaPredicted RBP16.19■□□□□ 0.18
SCN3B-201ENST00000299333 H0Y3Z8 333 aa16.18■□□□□ 0.18
SCN3B-201ENST00000299333 RIMBP2O15034 1052 aa16.18■□□□□ 0.18
SCN3B-201ENST00000299333 CHUKO15111 745 aa16.18■□□□□ 0.18
SCN3B-201ENST00000299333 FLCNQ8NFG4 579 aa16.18■□□□□ 0.18
SCN3B-201ENST00000299333 ARMCX3Q9UH62 379 aaPredicted RBP16.18■□□□□ 0.18
SCN3B-201ENST00000299333 EIF4E1BA6NMX2 242 aaKnown RBP16.18■□□□□ 0.18
SCN3B-201ENST00000299333 PMS1P54277 932 aaKnown RBP16.18■□□□□ 0.18
SCN3B-201ENST00000299333 TMEM259Q4ZIN3 620 aa16.18■□□□□ 0.18
SCN3B-201ENST00000299333 ZBTB41Q5SVQ8 909 aa16.18■□□□□ 0.18
SCN3B-201ENST00000299333 CMTR1Q8N1G2 835 aaKnown RBP16.18■□□□□ 0.18
SCN3B-201ENST00000299333 PDE6CP51160 858 aa16.18■□□□□ 0.18
SCN3B-201ENST00000299333 TTBK2Q6IQ55 1244 aa16.18■□□□□ 0.18
SCN3B-201ENST00000299333 NOSTRINQ8IVI9 506 aa16.18■□□□□ 0.18
SCN3B-201ENST00000299333 CDKL2Q92772 493 aa16.18■□□□□ 0.18
SCN3B-201ENST00000299333 DENND2AQ9ULE3 1009 aa16.18■□□□□ 0.18
SCN3B-201ENST00000299333 TSC22D4Q9Y3Q8 395 aa16.18■□□□□ 0.18
SCN3B-201ENST00000299333 GPATCH8Q9UKJ3 1502 aaKnown RBP16.17■□□□□ 0.18
SCN3B-201ENST00000299333 PALM3A6NDB9 673 aaPredicted RBP16.17■□□□□ 0.18
SCN3B-201ENST00000299333 STX1BP61266 288 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 TPH2Q8IWU9 490 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 NFATC2IPQ8NCF5 419 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 DUOX2Q9NRD8 1548 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 EYA2O00167 538 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 ESRRAP11474 423 aaPredicted RBP16.17■□□□□ 0.18
SCN3B-201ENST00000299333 CCHCR1Q8TD31 782 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 NRBF2Q96F24 287 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 CARD10Q9BWT7 1032 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 BIN2Q9UBW5 565 aaPredicted RBP16.17■□□□□ 0.18
SCN3B-201ENST00000299333 TPCN1Q9ULQ1 816 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 BZW2Q9Y6E2 419 aaKnown RBP16.17■□□□□ 0.18
SCN3B-201ENST00000299333 CD109Q6YHK3 1445 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 WDR91A4D1P6 747 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 CFLARO15519 480 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 ARHGEF9O43307 516 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 ACTN3Q08043 901 aaPredicted RBP16.17■□□□□ 0.18
SCN3B-201ENST00000299333 MESDQ14696 234 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 USH1GQ495M9 461 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 KBTBD3Q8NAB2 608 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 SLC39A2Q9NP94 309 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 GNPTABQ3T906 1256 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 RAPH1Q70E73 1250 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 ZCRB1Q8TBF4 217 aaKnown RBP16.17■□□□□ 0.18
SCN3B-201ENST00000299333 FAM167BQ9BTA0 163 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 TUBB6Q9BUF5 446 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 NT5C3AQ9H0P0 336 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 CLIC4Q9Y696 253 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 PEG3Q9GZU2 1588 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 PNMA6EA0A0J9YXQ4 647 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 RPN1P04843 607 aaKnown RBP16.17■□□□□ 0.18
SCN3B-201ENST00000299333 TECP42680 631 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 SLC7A5Q01650 507 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 CDAN1Q8IWY9 1227 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 HIPK4Q8NE63 616 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 ACRBPQ8NEB7 543 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 RIOK1Q9BRS2 568 aaKnown RBP16.17■□□□□ 0.18
SCN3B-201ENST00000299333 TM6SF1Q9BZW5 370 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 ZC3H12CQ9C0D7 883 aaKnown RBP16.17■□□□□ 0.18
SCN3B-201ENST00000299333 GLT8D2Q9H1C3 349 aa16.17■□□□□ 0.18
SCN3B-201ENST00000299333 SGK1O00141 431 aa16.16■□□□□ 0.18
SCN3B-201ENST00000299333 TCOF1Q13428 1488 aaKnown RBP16.16■□□□□ 0.18
SCN3B-201ENST00000299333 GOLGA8QA0A0J9YX86 632 aa16.16■□□□□ 0.18
SCN3B-201ENST00000299333 GOLGA8OA6NCC3 632 aa16.16■□□□□ 0.18
SCN3B-201ENST00000299333 HMGB1P1B2RPK0 211 aaPredicted RBP16.16■□□□□ 0.18
SCN3B-201ENST00000299333 GOLGA8NF8WBI6 632 aa16.16■□□□□ 0.18
SCN3B-201ENST00000299333 NACA2Q9H009 215 aa16.16■□□□□ 0.18
SCN3B-201ENST00000299333 G3BP2Q9UN86 482 aaKnown RBP16.16■□□□□ 0.18
SCN3B-201ENST00000299333 C11orf57Q6ZUT1 292 aaPredicted RBP16.16■□□□□ 0.18
SCN3B-201ENST00000299333 OTUD6AQ7L8S5 288 aa16.16■□□□□ 0.18
SCN3B-201ENST00000299333 TRIM42Q8IWZ5 723 aa16.16■□□□□ 0.18
SCN3B-201ENST00000299333 KCNV2Q8TDN2 545 aa16.16■□□□□ 0.18
SCN3B-201ENST00000299333 TRPC6Q9Y210 931 aa16.16■□□□□ 0.18
SCN3B-201ENST00000299333 PPP2R5BQ15173 497 aa16.16■□□□□ 0.18
SCN3B-201ENST00000299333 PTPRKQ15262 1439 aa16.16■□□□□ 0.18
SCN3B-201ENST00000299333 RBM26Q5T8P6 1007 aaKnown RBP16.16■□□□□ 0.18
SCN3B-201ENST00000299333 FNBP4Q8N3X1 1017 aaPredicted RBP16.16■□□□□ 0.18
SCN3B-201ENST00000299333 PALD1Q9ULE6 856 aa16.16■□□□□ 0.18
SCN3B-201ENST00000299333 ARHGEF12Q9NZN5 1544 aa16.15■□□□□ 0.18
SCN3B-201ENST00000299333 SOWAHDA6NJG2 315 aa16.15■□□□□ 0.18
SCN3B-201ENST00000299333 ALS2CLQ60I27 953 aa16.15■□□□□ 0.18
SCN3B-201ENST00000299333 ELAC2Q9BQ52 826 aaKnown RBP16.15■□□□□ 0.18
SCN3B-201ENST00000299333 FIS1Q9Y3D6 152 aa16.15■□□□□ 0.18
SCN3B-201ENST00000299333 H7C0C1 242 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms