RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 MTIF2P46199 727 aaKnown RBP16.56■□□□□ 0.24
CCT3-201ENST00000295688 TFAP4Q01664 338 aa16.56■□□□□ 0.24
CCT3-201ENST00000295688 AMOTL1Q8IY63 956 aa16.56■□□□□ 0.24
CCT3-201ENST00000295688 FNBP4Q8N3X1 1017 aaPredicted RBP16.56■□□□□ 0.24
CCT3-201ENST00000295688 CAGE1Q8TC20 777 aa16.56■□□□□ 0.24
CCT3-201ENST00000295688 GPKOWQ92917 476 aaPredicted RBP eCLIP16.56■□□□□ 0.241e-6■□□□□ 11.3
CCT3-201ENST00000295688 ERGIC2Q96RQ1 377 aa16.56■□□□□ 0.24
CCT3-201ENST00000295688 DUSP9Q99956 384 aaKnown RBP16.56■□□□□ 0.24
CCT3-201ENST00000295688 MYH1P12882 1939 aa16.56■□□□□ 0.24
CCT3-201ENST00000295688 TNNT3P45378 269 aaPredicted RBP16.55■□□□□ 0.24
CCT3-201ENST00000295688 HSPA2P54652 639 aa16.55■□□□□ 0.24
CCT3-201ENST00000295688 SPA17Q15506 151 aa16.55■□□□□ 0.24
CCT3-201ENST00000295688 SLC10A5Q5PT55 438 aa16.55■□□□□ 0.24
CCT3-201ENST00000295688 CABP7Q86V35 215 aa16.55■□□□□ 0.24
CCT3-201ENST00000295688 AFAP1L1Q8TED9 768 aa16.55■□□□□ 0.24
CCT3-201ENST00000295688 COG1Q8WTW3 980 aa16.55■□□□□ 0.24
CCT3-201ENST00000295688 PCMTD1Q96MG8 357 aaPredicted RBP16.55■□□□□ 0.24
CCT3-201ENST00000295688 TRERF1Q96PN7 1200 aa16.55■□□□□ 0.24
CCT3-201ENST00000295688 PURBQ96QR8 312 aaKnown RBP16.55■□□□□ 0.24
CCT3-201ENST00000295688 TMEM60Q9H2L4 133 aa16.55■□□□□ 0.24
CCT3-201ENST00000295688 MCM9Q9NXL9 1143 aa16.55■□□□□ 0.24
CCT3-201ENST00000295688 BARHL2Q9NY43 387 aa16.55■□□□□ 0.24
CCT3-201ENST00000295688 MYH14Q7Z406 1995 aaKnown RBP16.55■□□□□ 0.24
CCT3-201ENST00000295688 CASZ1Q86V15 1759 aa16.55■□□□□ 0.24
CCT3-201ENST00000295688 NUTM2BA6NNL0 878 aaPredicted RBP16.55■□□□□ 0.24
CCT3-201ENST00000295688 NUTM2EB1AL46 878 aaPredicted RBP16.55■□□□□ 0.24
CCT3-201ENST00000295688 ADAMTS3O15072 1205 aa16.55■□□□□ 0.24
CCT3-201ENST00000295688 CYP2D6P10635 497 aa16.55■□□□□ 0.24
CCT3-201ENST00000295688 VAV2P52735 878 aa16.55■□□□□ 0.24
CCT3-201ENST00000295688 PDE4DQ08499 809 aa16.55■□□□□ 0.24
CCT3-201ENST00000295688 ORC2Q13416 577 aaPredicted RBP16.55■□□□□ 0.24
CCT3-201ENST00000295688 ITPK1Q13572 414 aa16.55■□□□□ 0.24
CCT3-201ENST00000295688 KRT25Q7Z3Z0 450 aa16.55■□□□□ 0.24
CCT3-201ENST00000295688 ZSCAN29Q8IWY8 852 aaPredicted RBP16.55■□□□□ 0.24
CCT3-201ENST00000295688 TRIM58Q8NG06 486 aa16.55■□□□□ 0.24
CCT3-201ENST00000295688 SMARCC1Q92922 1105 aaPredicted RBP16.55■□□□□ 0.24
CCT3-201ENST00000295688 CNOT6LQ96LI5 555 aaKnown RBP16.55■□□□□ 0.24
CCT3-201ENST00000295688 CRACR2AQ9BSW2 395 aa16.55■□□□□ 0.24
CCT3-201ENST00000295688 HDAC6Q9UBN7 1215 aa16.55■□□□□ 0.24
CCT3-201ENST00000295688 RNF40O75150 1001 aa16.54■□□□□ 0.24
CCT3-201ENST00000295688 ITIH3Q06033 890 aa16.54■□□□□ 0.24
CCT3-201ENST00000295688 INF2Q27J81 1249 aa16.54■□□□□ 0.24
CCT3-201ENST00000295688 C12orf60Q5U649 245 aa16.54■□□□□ 0.24
CCT3-201ENST00000295688 CNNM4Q6P4Q7 775 aa16.54■□□□□ 0.24
CCT3-201ENST00000295688 RASGRP4Q8TDF6 673 aa16.54■□□□□ 0.24
CCT3-201ENST00000295688 SECISBP2LQ93073 1101 aaKnown RBP16.54■□□□□ 0.24
CCT3-201ENST00000295688 NOC4LQ9BVI4 516 aaKnown RBP16.54■□□□□ 0.24
CCT3-201ENST00000295688 FAM204AQ9H8W3 233 aa16.54■□□□□ 0.24
CCT3-201ENST00000295688 MAD2L2Q9UI95 211 aa16.54■□□□□ 0.24
CCT3-201ENST00000295688 HPCAL4Q9UM19 191 aa16.54■□□□□ 0.24
CCT3-201ENST00000295688 COL4A1P02462 1669 aa16.54■□□□□ 0.24
CCT3-201ENST00000295688 TACC1O75410 805 aa16.54■□□□□ 0.24
CCT3-201ENST00000295688 FGFR1OPO95684 399 aaKnown RBP16.54■□□□□ 0.24
CCT3-201ENST00000295688 OR52Z1P0C646 297 aa16.54■□□□□ 0.24
CCT3-201ENST00000295688 PRLRP16471 622 aa16.54■□□□□ 0.24
CCT3-201ENST00000295688 CCNI2Q6ZMN8 369 aaPredicted RBP16.54■□□□□ 0.24
CCT3-201ENST00000295688 CCDC42Q96M95 316 aa16.54■□□□□ 0.24
CCT3-201ENST00000295688 TRIM9Q9C026 710 aa16.54■□□□□ 0.24
CCT3-201ENST00000295688 MKNK2Q9HBH9 465 aa16.54■□□□□ 0.24
CCT3-201ENST00000295688 AGPAT5Q9NUQ2 364 aa16.54■□□□□ 0.24
CCT3-201ENST00000295688 JRKLQ9Y4A0 524 aa16.54■□□□□ 0.24
CCT3-201ENST00000295688 PP2D1A8MPX8 630 aa16.53■□□□□ 0.24
CCT3-201ENST00000295688 STXBP3O00186 592 aa16.53■□□□□ 0.24
CCT3-201ENST00000295688 SYF2O95926 243 aaKnown RBP16.53■□□□□ 0.24
CCT3-201ENST00000295688 IDEP14735 1019 aa16.53■□□□□ 0.24
CCT3-201ENST00000295688 PLCG1P19174 1290 aa16.53■□□□□ 0.24
CCT3-201ENST00000295688 HNRNPH3P31942 346 aaKnown RBP16.53■□□□□ 0.24
CCT3-201ENST00000295688 RPS8P62241 208 aaKnown RBP16.53■□□□□ 0.24
CCT3-201ENST00000295688 HEATR3Q7Z4Q2 680 aa16.53■□□□□ 0.24
CCT3-201ENST00000295688 STAG2Q8N3U4 1231 aa16.53■□□□□ 0.24
CCT3-201ENST00000295688 A0A0G2JS52 829 aa16.53■□□□□ 0.24
CCT3-201ENST00000295688 VGLL3A8MV65 326 aa16.53■□□□□ 0.24
CCT3-201ENST00000295688 ASIC1P78348 528 aa16.53■□□□□ 0.24
CCT3-201ENST00000295688 DDB1Q16531 1140 aa16.53■□□□□ 0.24
CCT3-201ENST00000295688 ANKRD40Q6AI12 368 aa16.53■□□□□ 0.24
CCT3-201ENST00000295688 DZIP1Q86YF9 867 aaKnown RBP16.53■□□□□ 0.24
CCT3-201ENST00000295688 MMGT1Q8N4V1 131 aa16.53■□□□□ 0.24
CCT3-201ENST00000295688 CAPZA3Q96KX2 299 aa16.53■□□□□ 0.24
CCT3-201ENST00000295688 JADE2Q9NQC1 790 aa16.53■□□□□ 0.24
CCT3-201ENST00000295688 IL17RBQ9NRM6 502 aa16.53■□□□□ 0.24
CCT3-201ENST00000295688 THRAP3Q9Y2W1 955 aaKnown RBP16.53■□□□□ 0.24
CCT3-201ENST00000295688 ABCB11O95342 1321 aa16.52■□□□□ 0.24
CCT3-201ENST00000295688 WTIPA6NIX2 430 aaPredicted RBP16.52■□□□□ 0.24
CCT3-201ENST00000295688 TRIM66O15016 1216 aa16.52■□□□□ 0.24
CCT3-201ENST00000295688 SRGAP2O75044 1071 aa16.52■□□□□ 0.24
CCT3-201ENST00000295688 PHACTR2O75167 634 aa16.52■□□□□ 0.24
CCT3-201ENST00000295688 PRPF6O94906 941 aaKnown RBP16.52■□□□□ 0.24
CCT3-201ENST00000295688 GNA11P29992 359 aa16.52■□□□□ 0.24
CCT3-201ENST00000295688 NOP2P46087 812 aaKnown RBP16.52■□□□□ 0.24
CCT3-201ENST00000295688 EVX2Q03828 476 aa16.52■□□□□ 0.24
CCT3-201ENST00000295688 NONOQ15233 471 aaKnown RBP eCLIP16.52■□□□□ 0.24
CCT3-201ENST00000295688 TYW1BQ6NUM6 668 aa16.52■□□□□ 0.24
CCT3-201ENST00000295688 ZNF572Q7Z3I7 529 aaPredicted RBP16.52■□□□□ 0.24
CCT3-201ENST00000295688 ZNF444Q8N0Y2 327 aaPredicted RBP16.52■□□□□ 0.24
CCT3-201ENST00000295688 CELF1Q92879 486 aaKnown RBP16.52■□□□□ 0.24
CCT3-201ENST00000295688 CALML4Q96GE6 196 aa16.52■□□□□ 0.24
CCT3-201ENST00000295688 NYXQ9GZU5 481 aa16.52■□□□□ 0.24
CCT3-201ENST00000295688 LACRTQ9GZZ8 138 aa16.52■□□□□ 0.24
CCT3-201ENST00000295688 ZMYND12Q9H0C1 365 aa16.52■□□□□ 0.24
CCT3-201ENST00000295688 ZNF287Q9HBT7 754 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms