RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 TIMP1P01033 207 aa18.03■□□□□ 0.48
SOD1-201ENST00000270142 HSPD1P10809 573 aaKnown RBP18.03■□□□□ 0.48
SOD1-201ENST00000270142 PTGS1P23219 599 aa18.03■□□□□ 0.48
SOD1-201ENST00000270142 NKX3-2P78367 333 aa18.03■□□□□ 0.48
SOD1-201ENST00000270142 BEX3Q00994 111 aa18.03■□□□□ 0.48
SOD1-201ENST00000270142 TNFAIP2Q03169 654 aa18.03■□□□□ 0.48
SOD1-201ENST00000270142 NMIQ13287 307 aaPredicted RBP18.03■□□□□ 0.48
SOD1-201ENST00000270142 GNASQ5JWF2 1037 aa18.03■□□□□ 0.48
SOD1-201ENST00000270142 TTBK2Q6IQ55 1244 aa18.03■□□□□ 0.48
SOD1-201ENST00000270142 VTI1AQ96AJ9 217 aa18.03■□□□□ 0.48
SOD1-201ENST00000270142 CDX2Q99626 313 aaPredicted RBP18.03■□□□□ 0.48
SOD1-201ENST00000270142 LNPKQ9C0E8 428 aa18.03■□□□□ 0.48
SOD1-201ENST00000270142 RANBP17Q9H2T7 1088 aaKnown RBP18.03■□□□□ 0.48
SOD1-201ENST00000270142 TTYH1Q9H313 450 aaPredicted RBP18.03■□□□□ 0.48
SOD1-201ENST00000270142 CYP39A1Q9NYL5 469 aa18.03■□□□□ 0.48
SOD1-201ENST00000270142 GNEQ9Y223 722 aaKnown RBP18.03■□□□□ 0.48
SOD1-201ENST00000270142 ICAM1P05362 532 aa18.02■□□□□ 0.48
SOD1-201ENST00000270142 SLC16A2P36021 539 aa18.02■□□□□ 0.48
SOD1-201ENST00000270142 NSMFQ6X4W1 530 aa18.02■□□□□ 0.48
SOD1-201ENST00000270142 NOL8Q76FK4 1167 aaKnown RBP18.02■□□□□ 0.48
SOD1-201ENST00000270142 TLK2Q86UE8 772 aa18.02■□□□□ 0.48
SOD1-201ENST00000270142 FAM126BQ8IXS8 530 aa18.02■□□□□ 0.48
SOD1-201ENST00000270142 PURBQ96QR8 312 aaKnown RBP18.02■□□□□ 0.48
SOD1-201ENST00000270142 TMEM47Q9BQJ4 181 aa18.02■□□□□ 0.48
SOD1-201ENST00000270142 ZMYM6O95789 1325 aa18.01■□□□□ 0.47
SOD1-201ENST00000270142 FRMPD2Q68DX3 1309 aaPredicted RBP18.01■□□□□ 0.47
SOD1-201ENST00000270142 TOP1P11387 765 aaKnown RBP18.01■□□□□ 0.47
SOD1-201ENST00000270142 SMPD1P17405 629 aa18.01■□□□□ 0.47
SOD1-201ENST00000270142 HAND2P61296 217 aa18.01■□□□□ 0.47
SOD1-201ENST00000270142 SYDE2Q5VT97 1194 aa18.01■□□□□ 0.47
SOD1-201ENST00000270142 BTNL9Q6UXG8 535 aa18.01■□□□□ 0.47
SOD1-201ENST00000270142 EEPD1Q7L9B9 569 aa18.01■□□□□ 0.47
SOD1-201ENST00000270142 FBXO16Q8IX29 292 aaPredicted RBP18.01■□□□□ 0.47
SOD1-201ENST00000270142 PDGFCQ9NRA1 345 aa18.01■□□□□ 0.47
SOD1-201ENST00000270142 TCP11L1Q9NUJ3 509 aa18.01■□□□□ 0.47
SOD1-201ENST00000270142 CCDC171Q6TFL3 1326 aa18■□□□□ 0.47
SOD1-201ENST00000270142 UNC80Q8N2C7 3258 aa18■□□□□ 0.47
SOD1-201ENST00000270142 TRIM6-TRIM34B2RNG4 842 aa18■□□□□ 0.47
SOD1-201ENST00000270142 TMEM63BQ5T3F8 832 aa18■□□□□ 0.47
SOD1-201ENST00000270142 MFSD5Q6N075 450 aa18■□□□□ 0.47
SOD1-201ENST00000270142 TAPT1Q6NXT6 567 aa18■□□□□ 0.47
SOD1-201ENST00000270142 CXCL17Q6UXB2 119 aa18■□□□□ 0.47
SOD1-201ENST00000270142 TICAM2Q86XR7 235 aa18■□□□□ 0.47
SOD1-201ENST00000270142 MYLIPQ8WY64 445 aa18■□□□□ 0.47
SOD1-201ENST00000270142 RILPL2Q969X0 211 aa18■□□□□ 0.47
SOD1-201ENST00000270142 BUD13Q9BRD0 619 aaKnown RBP eCLIP18■□□□□ 0.472e-9■□□□□ 8.7
SOD1-201ENST00000270142 EYSQ5T1H1 3165 aa18■□□□□ 0.47
SOD1-201ENST00000270142 LCTP09848 1927 aa18■□□□□ 0.47
SOD1-201ENST00000270142 NFIBO00712 420 aa17.99■□□□□ 0.47
SOD1-201ENST00000270142 DYNC1LI2O43237 492 aaPredicted RBP17.99■□□□□ 0.47
SOD1-201ENST00000270142 PDHBP11177 359 aa17.99■□□□□ 0.47
SOD1-201ENST00000270142 TBC1D10CQ8IV04 446 aa17.99■□□□□ 0.47
SOD1-201ENST00000270142 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.99■□□□□ 0.474e-9■■■■□ 23.8
SOD1-201ENST00000270142 MORC4Q8TE76 937 aa17.99■□□□□ 0.47
SOD1-201ENST00000270142 PPP1R12CQ9BZL4 782 aa17.99■□□□□ 0.47
SOD1-201ENST00000270142 GPCPD1Q9NPB8 672 aa17.99■□□□□ 0.47
SOD1-201ENST00000270142 TMEM265A0A087WTH1 108 aa17.98■□□□□ 0.47
SOD1-201ENST00000270142 TLR3O15455 904 aaKnown RBP17.98■□□□□ 0.47
SOD1-201ENST00000270142 CD4P01730 458 aa17.98■□□□□ 0.47
SOD1-201ENST00000270142 PPIGQ13427 754 aaKnown RBP eCLIP17.98■□□□□ 0.47
SOD1-201ENST00000270142 BAATQ14032 418 aaPredicted RBP17.98■□□□□ 0.47
SOD1-201ENST00000270142 FSCN1Q16658 493 aaKnown RBP17.98■□□□□ 0.47
SOD1-201ENST00000270142 AKNAD1Q5T1N1 836 aa17.98■□□□□ 0.47
SOD1-201ENST00000270142 B4GALNT3Q6L9W6 998 aa17.98■□□□□ 0.47
SOD1-201ENST00000270142 SLC43A3Q8NBI5 491 aa17.98■□□□□ 0.47
SOD1-201ENST00000270142 AP5M1Q9H0R1 490 aa17.98■□□□□ 0.47
SOD1-201ENST00000270142 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.97■□□□□ 0.47
SOD1-201ENST00000270142 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.97■□□□□ 0.47
SOD1-201ENST00000270142 CSF2RAP15509 400 aa17.97■□□□□ 0.47
SOD1-201ENST00000270142 ALDH5A1P51649 535 aaPredicted RBP17.97■□□□□ 0.47
SOD1-201ENST00000270142 TMEM240Q5SV17 173 aa17.97■□□□□ 0.47
SOD1-201ENST00000270142 IQSEC1Q6DN90 963 aa17.97■□□□□ 0.47
SOD1-201ENST00000270142 C16orf59Q7L2K0 433 aa17.97■□□□□ 0.47
SOD1-201ENST00000270142 SMC5Q8IY18 1101 aa17.97■□□□□ 0.47
SOD1-201ENST00000270142 VTA1Q9NP79 307 aa17.97■□□□□ 0.47
SOD1-201ENST00000270142 Q9Y3F1 56 aa17.97■□□□□ 0.47
SOD1-201ENST00000270142 GRIN2DO15399 1336 aa17.97■□□□□ 0.47
SOD1-201ENST00000270142 NEDD4P46934 1319 aa17.97■□□□□ 0.47
SOD1-201ENST00000270142 PTPDC1A2A3K4 754 aa17.96■□□□□ 0.47
SOD1-201ENST00000270142 ZEB2O60315 1214 aa17.96■□□□□ 0.47
SOD1-201ENST00000270142 CABYRO75952 493 aa17.96■□□□□ 0.47
SOD1-201ENST00000270142 SNHG28P0DPA3 235 aa17.96■□□□□ 0.47
SOD1-201ENST00000270142 ACRP10323 421 aa17.96■□□□□ 0.47
SOD1-201ENST00000270142 SDSP20132 328 aa17.96■□□□□ 0.47
SOD1-201ENST00000270142 DNAJB2P25686 324 aa17.96■□□□□ 0.47
SOD1-201ENST00000270142 ZNF543Q08ER8 600 aa17.96■□□□□ 0.47
SOD1-201ENST00000270142 ITGA7Q13683 1181 aa17.96■□□□□ 0.47
SOD1-201ENST00000270142 SLC30A10Q6XR72 485 aa17.96■□□□□ 0.47
SOD1-201ENST00000270142 MFSD6Q6ZSS7 791 aa17.96■□□□□ 0.47
SOD1-201ENST00000270142 KIAA1211Q6ZU35 1233 aa17.96■□□□□ 0.47
SOD1-201ENST00000270142 TMEM199Q8N511 208 aa17.96■□□□□ 0.47
SOD1-201ENST00000270142 MAFAQ8NHW3 353 aaPredicted RBP17.96■□□□□ 0.47
SOD1-201ENST00000270142 CLEC4DQ8WXI8 215 aa17.96■□□□□ 0.47
SOD1-201ENST00000270142 A0A0C4DFX4 3053 aa17.95■□□□□ 0.46
SOD1-201ENST00000270142 PCP11498 1178 aaKnown RBP17.95■□□□□ 0.46
SOD1-201ENST00000270142 FOSL2P15408 326 aa17.95■□□□□ 0.46
SOD1-201ENST00000270142 PLEKHM2Q8IWE5 1019 aa17.95■□□□□ 0.46
SOD1-201ENST00000270142 TTC14Q96N46 770 aa17.95■□□□□ 0.46
SOD1-201ENST00000270142 ZKSCAN3Q9BRR0 538 aa17.95■□□□□ 0.46
SOD1-201ENST00000270142 COL25A1Q9BXS0 654 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms