RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 DMGDHQ9UI17 866 aaKnown RBP14.6□□□□□ -0.07
NUP54-201ENST00000264883 ZNF532Q9HCE3 1301 aa14.6□□□□□ -0.07
NUP54-201ENST00000264883 MYH14Q7Z406 1995 aaKnown RBP14.6□□□□□ -0.07
NUP54-201ENST00000264883 PDE6AP16499 860 aa14.6□□□□□ -0.07
NUP54-201ENST00000264883 XBP1P17861 261 aa14.6□□□□□ -0.07
NUP54-201ENST00000264883 GNAT2P19087 354 aa14.6□□□□□ -0.07
NUP54-201ENST00000264883 HERVK_113P62684 666 aa14.6□□□□□ -0.07
NUP54-201ENST00000264883 GRIN1Q05586 938 aa14.6□□□□□ -0.07
NUP54-201ENST00000264883 ITPK1Q13572 414 aa14.6□□□□□ -0.07
NUP54-201ENST00000264883 AP1ARQ63HQ0 302 aa14.6□□□□□ -0.07
NUP54-201ENST00000264883 HAUS2Q9NVX0 235 aa14.6□□□□□ -0.07
NUP54-201ENST00000264883 NHSQ6T4R5 1651 aa14.6□□□□□ -0.07
NUP54-201ENST00000264883 ARAP2Q8WZ64 1704 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 ERICH2A1L162 156 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 PPP1R12BO60237 982 aaPredicted RBP14.59□□□□□ -0.07
NUP54-201ENST00000264883 KRT14P02533 472 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 RXRAP19793 462 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 APBA1Q02410 837 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 IFFO1Q0D2I5 559 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 AKNAD1Q5T1N1 836 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 RCSD1Q6JBY9 416 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 INTS5Q6P9B9 1019 aaKnown RBP14.59□□□□□ -0.07
NUP54-201ENST00000264883 KIF6Q6ZMV9 814 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 FAM43BQ6ZT52 329 aaPredicted RBP14.59□□□□□ -0.07
NUP54-201ENST00000264883 KIAA1328Q86T90 577 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 CAVIN3Q969G5 261 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 FERMT2Q96AC1 680 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 RSRC1Q96IZ7 334 aaKnown RBP14.59□□□□□ -0.07
NUP54-201ENST00000264883 SH3GL3Q99963 347 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 VPS16Q9H269 839 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 MYO5AQ9Y4I1 1855 aaKnown RBP14.59□□□□□ -0.07
NUP54-201ENST00000264883 TCRBV5S4A2TA0A5A2 114 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 ANO9A1A5B4 782 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 E7EVH7 732 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 KRT86O43790 486 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 IDEP14735 1019 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 NR1D1P20393 614 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 MDH1P40925 334 aaKnown RBP14.59□□□□□ -0.07
NUP54-201ENST00000264883 ADCY2Q08462 1091 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 KRT31Q15323 416 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 EMC10Q5UCC4 262 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 SH3RF1Q7Z6J0 888 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 MAB21L3Q8N8X9 362 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 NAPBQ9H115 298 aa14.59□□□□□ -0.07
NUP54-201ENST00000264883 ANKRD36CQ5JPF3 1778 aa14.58□□□□□ -0.07
NUP54-201ENST00000264883 A0A0G2JS52 829 aa14.58□□□□□ -0.08
NUP54-201ENST00000264883 ANKRD33BA6NCL7 494 aa14.58□□□□□ -0.08
NUP54-201ENST00000264883 ICA1Q05084 483 aa14.58□□□□□ -0.08
NUP54-201ENST00000264883 GIGYF2Q6Y7W6 1299 aaKnown RBP14.58□□□□□ -0.08
NUP54-201ENST00000264883 LDHAL6AQ6ZMR3 332 aa14.58□□□□□ -0.08
NUP54-201ENST00000264883 CALR3Q96L12 384 aaKnown RBP14.58□□□□□ -0.08
NUP54-201ENST00000264883 LIMA1Q9UHB6 759 aaKnown RBP14.58□□□□□ -0.08
NUP54-201ENST00000264883 ANKRD18BA2A2Z9 1011 aa14.58□□□□□ -0.08
NUP54-201ENST00000264883 EME2A4GXA9 379 aaPredicted RBP14.58□□□□□ -0.08
NUP54-201ENST00000264883 IDH1O75874 414 aaKnown RBP14.58□□□□□ -0.08
NUP54-201ENST00000264883 KRT83P78385 493 aa14.58□□□□□ -0.08
NUP54-201ENST00000264883 SLC7A5Q01650 507 aa14.58□□□□□ -0.08
NUP54-201ENST00000264883 PI16Q6UXB8 463 aa14.58□□□□□ -0.08
NUP54-201ENST00000264883 MFSD6Q6ZSS7 791 aa14.58□□□□□ -0.08
NUP54-201ENST00000264883 IFNL3Q8IZI9 196 aa14.58□□□□□ -0.08
NUP54-201ENST00000264883 CRACR2BQ8N4Y2 399 aaPredicted RBP14.58□□□□□ -0.08
NUP54-201ENST00000264883 NACAP1Q9BZK3 213 aa14.58□□□□□ -0.08
NUP54-201ENST00000264883 RNF41Q9H4P4 317 aaPredicted RBP14.58□□□□□ -0.08
NUP54-201ENST00000264883 KIF9Q9HAQ2 790 aa14.58□□□□□ -0.08
NUP54-201ENST00000264883 SENP2Q9HC62 589 aa14.58□□□□□ -0.08
NUP54-201ENST00000264883 PIH1D3Q9NQM4 214 aaKnown RBP14.58□□□□□ -0.08
NUP54-201ENST00000264883 CCDC87Q9NVE4 849 aa14.58□□□□□ -0.08
NUP54-201ENST00000264883 ZSWIM5Q9P217 1185 aa14.58□□□□□ -0.08
NUP54-201ENST00000264883 ZNF330Q9Y3S2 320 aaPredicted RBP14.58□□□□□ -0.08
NUP54-201ENST00000264883 BTAF1O14981 1849 aa14.57□□□□□ -0.08
NUP54-201ENST00000264883 NUP98P52948 1817 aa14.57□□□□□ -0.08
NUP54-201ENST00000264883 DOCK2Q92608 1830 aa14.57□□□□□ -0.08
NUP54-201ENST00000264883 SRRM3A6NNA2 597 aaPredicted RBP14.57□□□□□ -0.08
NUP54-201ENST00000264883 DNM1LO00429 736 aa14.57□□□□□ -0.08
NUP54-201ENST00000264883 COPB1P53618 953 aaKnown RBP14.57□□□□□ -0.08
NUP54-201ENST00000264883 MRPS25P82663 173 aaKnown RBP14.57□□□□□ -0.08
NUP54-201ENST00000264883 WTAPQ15007 396 aa14.57□□□□□ -0.08
NUP54-201ENST00000264883 CFAP58Q5T655 872 aa14.57□□□□□ -0.08
NUP54-201ENST00000264883 TMED8Q6PL24 325 aaPredicted RBP14.57□□□□□ -0.08
NUP54-201ENST00000264883 PTF1AQ7RTS3 328 aa14.57□□□□□ -0.08
NUP54-201ENST00000264883 TATDN2Q93075 761 aa14.57□□□□□ -0.08
NUP54-201ENST00000264883 CYFIP2Q96F07 1278 aa14.57□□□□□ -0.08
NUP54-201ENST00000264883 RNF26Q9BY78 433 aaPredicted RBP14.57□□□□□ -0.08
NUP54-201ENST00000264883 DENND2AQ9ULE3 1009 aa14.57□□□□□ -0.08
NUP54-201ENST00000264883 RTL9Q8NET4 1388 aa14.57□□□□□ -0.08
NUP54-201ENST00000264883 TRIM75PA6NK02 468 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 ERVV-1B6SEH8 477 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 CRKLP46109 303 aaKnown RBP14.56□□□□□ -0.08
NUP54-201ENST00000264883 MAP3K12Q12852 859 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 ANKRD20A8PQ5CZ79 823 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 ZNF662Q6ZS27 426 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 SMYD4Q8IYR2 804 aaPredicted RBP14.56□□□□□ -0.08
NUP54-201ENST00000264883 VGLL2Q8N8G2 317 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 OR8K1Q8NGG5 319 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 SPDL1Q96EA4 605 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 CSRNP2Q9H175 543 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 BATF3Q9NR55 127 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 ETAA1Q9NY74 926 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 TAB2Q9NYJ8 693 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 PCDHB6Q9Y5E3 794 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms