RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 MYCT1Q8N699 235 aa4.44□□□□□ -1.7
RNF38-201ENST00000259605 FSIP1Q8NA03 581 aa4.44□□□□□ -1.7
RNF38-201ENST00000259605 ACAP3Q96P50 834 aa4.44□□□□□ -1.7
RNF38-201ENST00000259605 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.44□□□□□ -1.72e-7■■■■□ 20.1
RNF38-201ENST00000259605 FAM49AQ9H0Q0 323 aaPredicted RBP4.44□□□□□ -1.7
RNF38-201ENST00000259605 RNF208Q9H0X6 261 aa4.44□□□□□ -1.7
RNF38-201ENST00000259605 TMEM39AQ9NV64 488 aa4.44□□□□□ -1.7
RNF38-201ENST00000259605 CNOT7Q9UIV1 285 aaKnown RBP4.44□□□□□ -1.7
RNF38-201ENST00000259605 CARMIL3Q8ND23 1372 aa4.44□□□□□ -1.7
RNF38-201ENST00000259605 PALLDQ8WX93 1383 aa4.44□□□□□ -1.7
RNF38-201ENST00000259605 RALGAPBQ86X10 1494 aa4.44□□□□□ -1.7
RNF38-201ENST00000259605 PPFIA2O75334 1257 aa4.44□□□□□ -1.7
RNF38-201ENST00000259605 ACADMP11310 421 aa4.44□□□□□ -1.7
RNF38-201ENST00000259605 BMP3P12645 472 aa4.44□□□□□ -1.7
RNF38-201ENST00000259605 TNFAIP3P21580 790 aa4.44□□□□□ -1.7
RNF38-201ENST00000259605 DNA2P51530 1060 aa4.44□□□□□ -1.7
RNF38-201ENST00000259605 LACTBP83111 547 aaPredicted RBP4.44□□□□□ -1.7
RNF38-201ENST00000259605 PEX6Q13608 980 aa4.44□□□□□ -1.7
RNF38-201ENST00000259605 GALNT17Q6IS24 598 aa4.44□□□□□ -1.7
RNF38-201ENST00000259605 JARID2Q92833 1246 aaPredicted RBP4.44□□□□□ -1.7
RNF38-201ENST00000259605 HAUS8Q9BT25 410 aa4.44□□□□□ -1.7
RNF38-201ENST00000259605 SLC28A3Q9HAS3 691 aa4.44□□□□□ -1.7
RNF38-201ENST00000259605 DACT1Q9NYF0 836 aa4.44□□□□□ -1.7
RNF38-201ENST00000259605 FLT1P17948 1338 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 DUOX2Q9NRD8 1548 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 ERVV-1B6SEH8 477 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 FAM47E-STBD1D6RA91 191 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 hCG_1984214I3L0E3 225 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 ENC1O14682 589 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 N4BP3O15049 544 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 DYRK3O43781 588 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 EFCAB14O75071 495 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 CAVIN2O95810 425 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 MAPK4P31152 587 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 STAT2P52630 851 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 CTSWP56202 376 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 ASPRV1Q53RT3 343 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 COLEC12Q5KU26 742 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 PPP1R21Q6ZMI0 780 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 ANKS3Q6ZW76 656 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 VPS52Q8N1B4 723 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 CCDC24Q8N4L8 307 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 GPRC5AQ8NFJ5 357 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 TRIM7Q9C029 511 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 HELLSQ9NRZ9 838 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 C1orf112Q9NSG2 853 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 PCDHB7Q9Y5E2 793 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 KDM6BO15054 1643 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 A6NJR5 290 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 TBC1D12O60347 775 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 XYLBO75191 536 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 VAMP4O75379 141 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 ZNF189O75820 626 aaPredicted RBP4.43□□□□□ -1.7
RNF38-201ENST00000259605 TMCC1O94876 653 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 CYP2B6P20813 491 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 HOXA7P31268 230 aaPredicted RBP4.43□□□□□ -1.7
RNF38-201ENST00000259605 ALDH7A1P49419 539 aaKnown RBP4.43□□□□□ -1.7
RNF38-201ENST00000259605 CALCOCO2Q13137 446 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 BYSLQ13895 437 aaKnown RBP4.43□□□□□ -1.7
RNF38-201ENST00000259605 DDX53Q86TM3 631 aaKnown RBP4.43□□□□□ -1.7
RNF38-201ENST00000259605 CEP57Q86XR8 500 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 SPATA5Q8NB90 893 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 ATP2A3Q93084 1043 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 DNAJC7Q99615 494 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 COLEC11Q9BWP8 271 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 EMILIN2Q9BXX0 1053 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 RUBCNLQ9H714 662 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 PSTPIP2Q9H939 334 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 MTRF1LQ9UGC7 380 aaKnown RBP4.43□□□□□ -1.7
RNF38-201ENST00000259605 SEPT9Q9UHD8 586 aaPredicted RBP4.43□□□□□ -1.7
RNF38-201ENST00000259605 LIMCH1Q9UPQ0 1083 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 PPP2R3BQ9Y5P8 575 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 ATP10DQ9P241 1426 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 TTC41PQ6P2S7 1318 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 CLGNO14967 610 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 RNF8O76064 485 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 PHBP35232 272 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 KRT81Q14533 505 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 IQCB1Q15051 598 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 CEP85Q6P2H3 762 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 DHX32Q7L7V1 743 aaKnown RBP4.43□□□□□ -1.7
RNF38-201ENST00000259605 MICALL2Q8IY33 904 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 RHPN1Q8TCX5 695 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 PIK3R5Q8WYR1 880 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 NUP58Q9BVL2 599 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 RRAGCQ9HB90 399 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 NARFQ9UHQ1 456 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 SERPINB13Q9UIV8 391 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 BAG5Q9UL15 447 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 GPATCH8Q9UKJ3 1502 aaKnown RBP4.43□□□□□ -1.7
RNF38-201ENST00000259605 F6X3S4 739 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 OPLAHO14841 1288 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 BNIP3LO60238 219 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 IGSF3O75054 1194 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 SUN1O94901 812 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 DEXIO95424 95 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 MAN1A1P33908 653 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 EVCP57679 992 aa4.43□□□□□ -1.7
RNF38-201ENST00000259605 CCT2P78371 535 aaKnown RBP4.43□□□□□ -1.7
RNF38-201ENST00000259605 GPSM2P81274 684 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms