RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 FBXW10Q5XX13 1052 aa18.79■□□□□ 0.6
SGPP1-201ENST00000247225 MED4Q9NPJ6 270 aa18.79■□□□□ 0.6
SGPP1-201ENST00000247225 CNTNAP5Q8WYK1 1306 aa18.79■□□□□ 0.6
SGPP1-201ENST00000247225 EBAG9O00559 213 aa18.79■□□□□ 0.6
SGPP1-201ENST00000247225 BACH1O14867 736 aa18.79■□□□□ 0.6
SGPP1-201ENST00000247225 KRT14P02533 472 aa18.79■□□□□ 0.6
SGPP1-201ENST00000247225 TSPY3P0CV98 308 aa18.79■□□□□ 0.6
SGPP1-201ENST00000247225 TSPY8P0CW00 308 aa18.79■□□□□ 0.6
SGPP1-201ENST00000247225 MAGEA1P43355 309 aa18.79■□□□□ 0.6
SGPP1-201ENST00000247225 KLHL7Q8IXQ5 586 aa18.79■□□□□ 0.6
SGPP1-201ENST00000247225 IPO4Q8TEX9 1081 aaKnown RBP18.79■□□□□ 0.6
SGPP1-201ENST00000247225 CELF1Q92879 486 aaKnown RBP18.79■□□□□ 0.6
SGPP1-201ENST00000247225 CDHR2Q9BYE9 1310 aa18.79■□□□□ 0.6
SGPP1-201ENST00000247225 ARFGEF2Q9Y6D5 1785 aa18.79■□□□□ 0.6
SGPP1-201ENST00000247225 MYH8P13535 1937 aa18.79■□□□□ 0.6
SGPP1-201ENST00000247225 DNM2P50570 870 aa18.79■□□□□ 0.6
SGPP1-201ENST00000247225 GFPT1Q06210 699 aaPredicted RBP18.79■□□□□ 0.6
SGPP1-201ENST00000247225 TRIM14Q14142 442 aa18.79■□□□□ 0.6
SGPP1-201ENST00000247225 HLTFQ14527 1009 aaKnown RBP eCLIP18.79■□□□□ 0.6
SGPP1-201ENST00000247225 ERFEQ4G0M1 354 aa18.79■□□□□ 0.6
SGPP1-201ENST00000247225 TICAM2Q86XR7 235 aa18.79■□□□□ 0.6
SGPP1-201ENST00000247225 NELFCDQ8IXH7 590 aa18.79■□□□□ 0.6
SGPP1-201ENST00000247225 ARL8AQ96BM9 186 aa18.79■□□□□ 0.6
SGPP1-201ENST00000247225 CRNKL1Q9BZJ0 848 aaKnown RBP18.79■□□□□ 0.6
SGPP1-201ENST00000247225 GOLPH3Q9H4A6 298 aa18.79■□□□□ 0.6
SGPP1-201ENST00000247225 PAFAH1B1P43034 410 aa18.78■□□□□ 0.6
SGPP1-201ENST00000247225 MNAT1P51948 309 aa18.78■□□□□ 0.6
SGPP1-201ENST00000247225 CCNI2Q6ZMN8 369 aaPredicted RBP18.78■□□□□ 0.6
SGPP1-201ENST00000247225 ZNF512BQ96KM6 892 aaPredicted RBP18.78■□□□□ 0.6
SGPP1-201ENST00000247225 MAATS1Q7Z4T9 603 aa18.78■□□□□ 0.6
SGPP1-201ENST00000247225 MAPKAPK5Q8IW41 473 aa18.78■□□□□ 0.6
SGPP1-201ENST00000247225 ZNF444Q8N0Y2 327 aaPredicted RBP18.78■□□□□ 0.6
SGPP1-201ENST00000247225 JRKLQ9Y4A0 524 aa18.78■□□□□ 0.6
SGPP1-201ENST00000247225 KIF5BP33176 963 aa18.77■□□□□ 0.6
SGPP1-201ENST00000247225 CRKLP46109 303 aaKnown RBP18.77■□□□□ 0.6
SGPP1-201ENST00000247225 NAALADL2Q58DX5 795 aa18.77■□□□□ 0.6
SGPP1-201ENST00000247225 RIOK1Q9BRS2 568 aaKnown RBP18.77■□□□□ 0.6
SGPP1-201ENST00000247225 PSD3Q9NYI0 1048 aa18.77■□□□□ 0.6
SGPP1-201ENST00000247225 CALM1P0DP23 149 aa18.77■□□□□ 0.6
SGPP1-201ENST00000247225 CALM2P0DP24 149 aa18.77■□□□□ 0.6
SGPP1-201ENST00000247225 CALM3P0DP25 149 aa18.77■□□□□ 0.6
SGPP1-201ENST00000247225 USP17L2Q6R6M4 530 aa18.77■□□□□ 0.6
SGPP1-201ENST00000247225 CAPS2Q9BXY5 557 aa18.77■□□□□ 0.6
SGPP1-201ENST00000247225 DCP1AQ9NPI6 582 aaPredicted RBP18.77■□□□□ 0.6
SGPP1-201ENST00000247225 CAPN11Q9UMQ6 739 aa18.77■□□□□ 0.6
SGPP1-201ENST00000247225 NDUFAB1O14561 156 aa18.77■□□□□ 0.59
SGPP1-201ENST00000247225 NFU1Q9UMS0 254 aa18.77■□□□□ 0.59
SGPP1-201ENST00000247225 MYO5AQ9Y4I1 1855 aaKnown RBP18.77■□□□□ 0.59
SGPP1-201ENST00000247225 SEMA3EO15041 775 aa18.76■□□□□ 0.59
SGPP1-201ENST00000247225 PPFIA4O75335 1185 aa18.76■□□□□ 0.59
SGPP1-201ENST00000247225 GUCY2DQ02846 1103 aa18.76■□□□□ 0.59
SGPP1-201ENST00000247225 TUBB2AQ13885 445 aa18.76■□□□□ 0.59
SGPP1-201ENST00000247225 PFKFB3Q16875 520 aaPredicted RBP18.76■□□□□ 0.59
SGPP1-201ENST00000247225 GLIS3Q8NEA6 775 aa18.76■□□□□ 0.59
SGPP1-201ENST00000247225 LRRC15Q8TF66 581 aa18.76■□□□□ 0.59
SGPP1-201ENST00000247225 TGFBRAP1Q8WUH2 860 aa18.76■□□□□ 0.59
SGPP1-201ENST00000247225 P2RX5Q93086 422 aa18.76■□□□□ 0.59
SGPP1-201ENST00000247225 TUBB2BQ9BVA1 445 aa18.76■□□□□ 0.59
SGPP1-201ENST00000247225 PNPLA7Q6ZV29 1317 aa18.76■□□□□ 0.59
SGPP1-201ENST00000247225 MYH15Q9Y2K3 1946 aa18.76■□□□□ 0.59
SGPP1-201ENST00000247225 SHTN1A0MZ66 631 aa18.76■□□□□ 0.59
SGPP1-201ENST00000247225 C8orf74Q6P047 294 aa18.76■□□□□ 0.59
SGPP1-201ENST00000247225 ELOA2Q8IYF1 753 aaPredicted RBP18.76■□□□□ 0.59
SGPP1-201ENST00000247225 NOC3LQ8WTT2 800 aaKnown RBP18.76■□□□□ 0.59
SGPP1-201ENST00000247225 TMEM260Q9NX78 707 aa18.76■□□□□ 0.59
SGPP1-201ENST00000247225 MYO1AQ9UBC5 1043 aa18.76■□□□□ 0.59
SGPP1-201ENST00000247225 PCDHA13Q9Y5I0 950 aa18.76■□□□□ 0.59
SGPP1-201ENST00000247225 ITIH6Q6UXX5 1313 aa18.76■□□□□ 0.59
SGPP1-201ENST00000247225 ZNF263O14978 683 aa18.76■□□□□ 0.59
SGPP1-201ENST00000247225 MAGEA9P43362 315 aa18.76■□□□□ 0.59
SGPP1-201ENST00000247225 TRADDQ15628 312 aa18.76■□□□□ 0.59
SGPP1-201ENST00000247225 MKRN1Q9UHC7 482 aaKnown RBP18.76■□□□□ 0.59
SGPP1-201ENST00000247225 TNS3Q68CZ2 1445 aa18.75■□□□□ 0.59
SGPP1-201ENST00000247225 PSMD14O00487 310 aa18.75■□□□□ 0.59
SGPP1-201ENST00000247225 LONP1P36776 959 aaKnown RBP18.75■□□□□ 0.59
SGPP1-201ENST00000247225 IRAK1P51617 712 aa18.75■□□□□ 0.59
SGPP1-201ENST00000247225 ZNF384Q8TF68 577 aa18.75■□□□□ 0.59
SGPP1-201ENST00000247225 FAM84BQ96KN1 310 aaPredicted RBP18.75■□□□□ 0.59
SGPP1-201ENST00000247225 LRRC10BA6NIK2 292 aa18.75■□□□□ 0.59
SGPP1-201ENST00000247225 HSF2BPO75031 334 aa18.75■□□□□ 0.59
SGPP1-201ENST00000247225 KIF11P52732 1056 aa18.75■□□□□ 0.59
SGPP1-201ENST00000247225 SOGA3Q5TF21 947 aa18.75■□□□□ 0.59
SGPP1-201ENST00000247225 ZNF34Q8IZ26 560 aa18.75■□□□□ 0.59
SGPP1-201ENST00000247225 TSEN2Q8NCE0 465 aaKnown RBP18.75■□□□□ 0.59
SGPP1-201ENST00000247225 SPATA4Q8NEY3 305 aa18.75■□□□□ 0.59
SGPP1-201ENST00000247225 CCDC43Q96MW1 224 aaKnown RBP18.75■□□□□ 0.59
SGPP1-201ENST00000247225 DUSP9Q99956 384 aaKnown RBP18.75■□□□□ 0.59
SGPP1-201ENST00000247225 EPB41L5Q9HCM4 733 aa18.75■□□□□ 0.59
SGPP1-201ENST00000247225 LRRC53A6NM62 1247 aa18.74■□□□□ 0.59
SGPP1-201ENST00000247225 CALML3P27482 149 aa18.74■□□□□ 0.59
SGPP1-201ENST00000247225 CCDC40Q4G0X9 1142 aa18.74■□□□□ 0.59
SGPP1-201ENST00000247225 PCDHA4Q9UN74 947 aa18.74■□□□□ 0.59
SGPP1-201ENST00000247225 SLIT3O75094 1523 aa18.74■□□□□ 0.59
SGPP1-201ENST00000247225 FRMPD2Q68DX3 1309 aaPredicted RBP18.74■□□□□ 0.59
SGPP1-201ENST00000247225 NOP2P46087 812 aaKnown RBP18.74■□□□□ 0.59
SGPP1-201ENST00000247225 EHHADHQ08426 723 aa18.74■□□□□ 0.59
SGPP1-201ENST00000247225 TXNRD3Q86VQ6 643 aa18.74■□□□□ 0.59
SGPP1-201ENST00000247225 EHBP1Q8NDI1 1231 aa18.74■□□□□ 0.59
SGPP1-201ENST00000247225 TNFRSF25Q93038 417 aa18.74■□□□□ 0.59
SGPP1-201ENST00000247225 ANKIB1Q9P2G1 1089 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms