RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 PPP1R18Q6NYC8 613 aa12.7□□□□□ -0.38
TNFAIP3-201ENST00000237289 CDK5RAP3Q96JB5 506 aa12.7□□□□□ -0.38
TNFAIP3-201ENST00000237289 RAB34Q9BZG1 259 aa12.7□□□□□ -0.38
TNFAIP3-201ENST00000237289 BARHL2Q9NY43 387 aa12.7□□□□□ -0.38
TNFAIP3-201ENST00000237289 PCDHA4Q9UN74 947 aa12.7□□□□□ -0.38
TNFAIP3-201ENST00000237289 A0A1B0GUL6 1792 aa12.7□□□□□ -0.38
TNFAIP3-201ENST00000237289 MAP2K1Q02750 393 aaPredicted RBP12.7□□□□□ -0.38
TNFAIP3-201ENST00000237289 CHST13Q8NET6 341 aa12.7□□□□□ -0.38
TNFAIP3-201ENST00000237289 AIFM3Q96NN9 605 aa12.7□□□□□ -0.38
TNFAIP3-201ENST00000237289 MYH1P12882 1939 aa12.69□□□□□ -0.38
TNFAIP3-201ENST00000237289 MYO5AQ9Y4I1 1855 aaKnown RBP12.69□□□□□ -0.38
TNFAIP3-201ENST00000237289 ME1P48163 572 aa12.69□□□□□ -0.38
TNFAIP3-201ENST00000237289 PDE4DQ08499 809 aa12.69□□□□□ -0.38
TNFAIP3-201ENST00000237289 WWC2Q6AWC2 1192 aa12.69□□□□□ -0.38
TNFAIP3-201ENST00000237289 BRI3BPQ8WY22 251 aa12.69□□□□□ -0.38
TNFAIP3-201ENST00000237289 RIOX1Q9H6W3 641 aa12.69□□□□□ -0.38
TNFAIP3-201ENST00000237289 MYPNQ86TC9 1320 aa12.69□□□□□ -0.38
TNFAIP3-201ENST00000237289 AOC2O75106 756 aa12.69□□□□□ -0.38
TNFAIP3-201ENST00000237289 HOXA13P31271 388 aaPredicted RBP12.69□□□□□ -0.38
TNFAIP3-201ENST00000237289 SPATC1LQ9H0A9 340 aa12.69□□□□□ -0.38
TNFAIP3-201ENST00000237289 CNTNAP5Q8WYK1 1306 aa12.69□□□□□ -0.38
TNFAIP3-201ENST00000237289 IL17RAQ96F46 866 aa12.69□□□□□ -0.38
TNFAIP3-201ENST00000237289 SCN4AP35499 1836 aa12.69□□□□□ -0.38
TNFAIP3-201ENST00000237289 SBF1O95248 1867 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 BTBD18B2RXH4 712 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 BMP15O95972 392 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 COL9A3Q14050 684 aaPredicted RBP12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 SPATA32Q96LK8 384 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 PTMSP20962 102 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 MAP2K2P36507 400 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 FCGRTP55899 365 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 GNPTABQ3T906 1256 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 RILPL1Q5EBL4 403 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 MROH8Q9H579 483 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 HSPA6P17066 643 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 ERCC3P19447 782 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 MAPK4P31152 587 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 HOXA7P31268 230 aaPredicted RBP12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 OAZ1P54368 228 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 C1QTNF8P60827 252 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 HTRA3P83110 453 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 UBE2SQ16763 222 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 NLRX1Q86UT6 975 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 IFNL1Q8IU54 200 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 SIAH1Q8IUQ4 282 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 SAMM50Q9Y512 469 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 NAV1Q8NEY1 1877 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 DOCK2Q92608 1830 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 SPDYE16A6NNV3 312 aaPredicted RBP12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 PLA2G6O60733 806 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 F13A1P00488 732 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 NBPF11Q86T75 865 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 TFIP11Q9UBB9 837 aaKnown RBP12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 CNPY2Q9Y2B0 182 aa12.68□□□□□ -0.38
TNFAIP3-201ENST00000237289 TESPA1A2RU30 521 aaPredicted RBP12.67□□□□□ -0.38
TNFAIP3-201ENST00000237289 SNHG28P0DPA3 235 aa12.67□□□□□ -0.38
TNFAIP3-201ENST00000237289 MCM7P33993 719 aa12.67□□□□□ -0.38
TNFAIP3-201ENST00000237289 ERVK-9P63128 1117 aa12.67□□□□□ -0.38
TNFAIP3-201ENST00000237289 ERVK-24P63145 666 aa12.67□□□□□ -0.38
TNFAIP3-201ENST00000237289 USP17L6PQ6QN14 398 aa12.67□□□□□ -0.38
TNFAIP3-201ENST00000237289 BTNL9Q6UXG8 535 aa12.67□□□□□ -0.38
TNFAIP3-201ENST00000237289 HHIPL1Q96JK4 782 aa12.67□□□□□ -0.38
TNFAIP3-201ENST00000237289 SLC38A10Q9HBR0 1119 aa12.67□□□□□ -0.38
TNFAIP3-201ENST00000237289 DICER1Q9UPY3 1922 aaKnown RBP12.67□□□□□ -0.38
TNFAIP3-201ENST00000237289 CCNT1O60563 726 aaKnown RBP12.67□□□□□ -0.38
TNFAIP3-201ENST00000237289 NKX2-3Q8TAU0 364 aa12.67□□□□□ -0.38
TNFAIP3-201ENST00000237289 RASGRP4Q8TDF6 673 aa12.67□□□□□ -0.38
TNFAIP3-201ENST00000237289 RMDN3Q96TC7 470 aa12.67□□□□□ -0.38
TNFAIP3-201ENST00000237289 MMP1P03956 469 aa12.67□□□□□ -0.38
TNFAIP3-201ENST00000237289 FAM43AQ8N2R8 423 aa12.67□□□□□ -0.38
TNFAIP3-201ENST00000237289 SCAND2PQ9GZW5 306 aaPredicted RBP12.67□□□□□ -0.38
TNFAIP3-201ENST00000237289 EIF2AK2P19525 551 aaKnown RBP12.66□□□□□ -0.38
TNFAIP3-201ENST00000237289 UBXN2AP68543 259 aa12.66□□□□□ -0.38
TNFAIP3-201ENST00000237289 BAATQ14032 418 aaPredicted RBP12.66□□□□□ -0.38
TNFAIP3-201ENST00000237289 INF2Q27J81 1249 aa12.66□□□□□ -0.38
TNFAIP3-201ENST00000237289 CCDC73Q6ZRK6 1079 aa12.66□□□□□ -0.38
TNFAIP3-201ENST00000237289 PLEKHH3Q7Z736 793 aa12.66□□□□□ -0.38
TNFAIP3-201ENST00000237289 NOSTRINQ8IVI9 506 aa12.66□□□□□ -0.38
TNFAIP3-201ENST00000237289 NSUN6Q8TEA1 469 aaKnown RBP12.66□□□□□ -0.38
TNFAIP3-201ENST00000237289 NUDT12Q9BQG2 462 aa12.66□□□□□ -0.38
TNFAIP3-201ENST00000237289 RTN4Q9NQC3 1192 aaKnown RBP12.66□□□□□ -0.38
TNFAIP3-201ENST00000237289 CHMP4BP1P59074 171 aa12.66□□□□□ -0.38
TNFAIP3-201ENST00000237289 AP3B2Q13367 1082 aa12.66□□□□□ -0.38
TNFAIP3-201ENST00000237289 PKD2L1Q9P0L9 805 aa12.66□□□□□ -0.38
TNFAIP3-201ENST00000237289 PASKQ96RG2 1323 aa12.66□□□□□ -0.38
TNFAIP3-201ENST00000237289 CNGA1P29973 690 aa12.66□□□□□ -0.38
TNFAIP3-201ENST00000237289 ZNF174Q15697 407 aa12.66□□□□□ -0.38
TNFAIP3-201ENST00000237289 FAM177A1Q8N128 213 aaPredicted RBP12.66□□□□□ -0.38
TNFAIP3-201ENST00000237289 RAET1EQ8TD07 263 aa12.66□□□□□ -0.38
TNFAIP3-201ENST00000237289 RANBP17Q9H2T7 1088 aaKnown RBP12.66□□□□□ -0.38
TNFAIP3-201ENST00000237289 FOXP1Q9H334 677 aaPredicted RBP12.66□□□□□ -0.38
TNFAIP3-201ENST00000237289 PFASO15067 1338 aa12.66□□□□□ -0.38
TNFAIP3-201ENST00000237289 VEGFBP49765 207 aa12.65□□□□□ -0.38
TNFAIP3-201ENST00000237289 NEK8Q86SG6 692 aa12.65□□□□□ -0.38
TNFAIP3-201ENST00000237289 PGBD1Q96JS3 809 aa12.65□□□□□ -0.38
TNFAIP3-201ENST00000237289 RIC8AQ9NPQ8 531 aa12.65□□□□□ -0.38
TNFAIP3-201ENST00000237289 SLC45A1Q9Y2W3 748 aa12.65□□□□□ -0.38
TNFAIP3-201ENST00000237289 WDR90Q96KV7 1748 aa12.65□□□□□ -0.38
TNFAIP3-201ENST00000237289 CA12O43570 354 aa12.65□□□□□ -0.38
TNFAIP3-201ENST00000237289 TBC1D8O95759 1140 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms