RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 IL17AQ16552 155 aa22.38■■□□□ 1.17
TNFRSF1A-201ENST00000162749 UBE2Q2Q8WVN8 375 aa22.38■■□□□ 1.17
TNFRSF1A-201ENST00000162749 USH1GQ495M9 461 aa22.37■■□□□ 1.17
TNFRSF1A-201ENST00000162749 SASS6Q6UVJ0 657 aa22.37■■□□□ 1.17
TNFRSF1A-201ENST00000162749 SCYL3Q8IZE3 742 aa22.37■■□□□ 1.17
TNFRSF1A-201ENST00000162749 CHURC1Q8WUH1 139 aa22.37■■□□□ 1.17
TNFRSF1A-201ENST00000162749 EPSTI1Q96J88 318 aa22.37■■□□□ 1.17
TNFRSF1A-201ENST00000162749 TMEM60Q9H2L4 133 aa22.37■■□□□ 1.17
TNFRSF1A-201ENST00000162749 CCNT1O60563 726 aaKnown RBP22.37■■□□□ 1.17
TNFRSF1A-201ENST00000162749 LONRF3Q496Y0 759 aa22.37■■□□□ 1.17
TNFRSF1A-201ENST00000162749 DPY19L2Q6NUT2 758 aa22.37■■□□□ 1.17
TNFRSF1A-201ENST00000162749 KLRG1Q96E93 195 aa22.37■■□□□ 1.17
TNFRSF1A-201ENST00000162749 GLT8D2Q9H1C3 349 aa22.37■■□□□ 1.17
TNFRSF1A-201ENST00000162749 USP17L15C9J2P7 530 aa22.36■■□□□ 1.17
TNFRSF1A-201ENST00000162749 USP17L13C9JLJ4 530 aa22.36■■□□□ 1.17
TNFRSF1A-201ENST00000162749 USP17L11C9JVI0 530 aa22.36■■□□□ 1.17
TNFRSF1A-201ENST00000162749 USP17L18D6R9N7 530 aa22.36■■□□□ 1.17
TNFRSF1A-201ENST00000162749 USP17L22D6RA61 530 aa22.36■■□□□ 1.17
TNFRSF1A-201ENST00000162749 USP17L17D6RBQ6 530 aa22.36■■□□□ 1.17
TNFRSF1A-201ENST00000162749 USP17L19D6RCP7 530 aa22.36■■□□□ 1.17
TNFRSF1A-201ENST00000162749 USP17L20D6RJB6 530 aa22.36■■□□□ 1.17
TNFRSF1A-201ENST00000162749 USP17L24Q0WX57 530 aa22.36■■□□□ 1.17
TNFRSF1A-201ENST00000162749 GPR162Q16538 588 aa22.36■■□□□ 1.17
TNFRSF1A-201ENST00000162749 USP17L6PQ6QN14 398 aa22.36■■□□□ 1.17
TNFRSF1A-201ENST00000162749 LPAR1Q92633 364 aa22.36■■□□□ 1.17
TNFRSF1A-201ENST00000162749 SYMPKQ92797 1274 aaKnown RBP22.36■■□□□ 1.17
TNFRSF1A-201ENST00000162749 KIFC2Q96AC6 838 aa22.36■■□□□ 1.17
TNFRSF1A-201ENST00000162749 L3MBTL3Q96JM7 780 aaPredicted RBP22.36■■□□□ 1.17
TNFRSF1A-201ENST00000162749 FBXO28Q9NVF7 368 aa22.36■■□□□ 1.17
TNFRSF1A-201ENST00000162749 OTOFQ9HC10 1997 aa22.36■■□□□ 1.17
TNFRSF1A-201ENST00000162749 POLR2DO15514 142 aaKnown RBP22.35■■□□□ 1.17
TNFRSF1A-201ENST00000162749 KRBA2Q6ZNG9 492 aa22.35■■□□□ 1.17
TNFRSF1A-201ENST00000162749 KIAA1468Q9P260 1216 aa22.35■■□□□ 1.17
TNFRSF1A-201ENST00000162749 FEM1BQ9UK73 627 aa22.35■■□□□ 1.17
TNFRSF1A-201ENST00000162749 LAD1O00515 517 aa22.35■■□□□ 1.17
TNFRSF1A-201ENST00000162749 EDIL3O43854 480 aa22.35■■□□□ 1.17
TNFRSF1A-201ENST00000162749 TAL1P17542 331 aaPredicted RBP22.35■■□□□ 1.17
TNFRSF1A-201ENST00000162749 DGKZQ13574 1117 aa22.35■■□□□ 1.17
TNFRSF1A-201ENST00000162749 SUPT20HL1Q3ZLR7 823 aa22.35■■□□□ 1.17
TNFRSF1A-201ENST00000162749 FAM160B2Q86V87 743 aa22.35■■□□□ 1.17
TNFRSF1A-201ENST00000162749 RANBP17Q9H2T7 1088 aaKnown RBP22.35■■□□□ 1.17
TNFRSF1A-201ENST00000162749 PAPPA2Q9BXP8 1791 aa22.35■■□□□ 1.17
TNFRSF1A-201ENST00000162749 SCN4AP35499 1836 aa22.34■■□□□ 1.17
TNFRSF1A-201ENST00000162749 MEIS2O14770 477 aa22.34■■□□□ 1.17
TNFRSF1A-201ENST00000162749 WDR46O15213 610 aaKnown RBP22.34■■□□□ 1.17
TNFRSF1A-201ENST00000162749 MTMR2Q13614 643 aa22.34■■□□□ 1.17
TNFRSF1A-201ENST00000162749 PDILTQ8N807 584 aa22.34■■□□□ 1.17
TNFRSF1A-201ENST00000162749 USP25Q9UHP3 1055 aa22.34■■□□□ 1.17
TNFRSF1A-201ENST00000162749 NEMFO60524 1076 aa22.34■■□□□ 1.17
TNFRSF1A-201ENST00000162749 PTPRAP18433 802 aa22.34■■□□□ 1.17
TNFRSF1A-201ENST00000162749 MSNP26038 577 aaKnown RBP22.34■■□□□ 1.17
TNFRSF1A-201ENST00000162749 ANO6Q4KMQ2 910 aa22.34■■□□□ 1.17
TNFRSF1A-201ENST00000162749 DLK2Q6UY11 383 aa22.34■■□□□ 1.17
TNFRSF1A-201ENST00000162749 CNNM3Q8NE01 707 aa22.34■■□□□ 1.17
TNFRSF1A-201ENST00000162749 DCPSQ96C86 337 aaKnown RBP22.34■■□□□ 1.17
TNFRSF1A-201ENST00000162749 PTPRFP10586 1907 aa22.33■■□□□ 1.17
TNFRSF1A-201ENST00000162749 A0A087X0B3 334 aa22.33■■□□□ 1.17
TNFRSF1A-201ENST00000162749 OPLAHO14841 1288 aa22.33■■□□□ 1.17
TNFRSF1A-201ENST00000162749 ORC2Q13416 577 aaPredicted RBP22.33■■□□□ 1.17
TNFRSF1A-201ENST00000162749 WDR18Q9BV38 432 aa22.33■■□□□ 1.17
TNFRSF1A-201ENST00000162749 PICK1Q9NRD5 415 aa22.33■■□□□ 1.17
TNFRSF1A-201ENST00000162749 PRPHP41219 470 aa22.33■■□□□ 1.16
TNFRSF1A-201ENST00000162749 SPP2Q13103 211 aa22.33■■□□□ 1.16
TNFRSF1A-201ENST00000162749 SULF1Q8IWU6 871 aa22.33■■□□□ 1.16
TNFRSF1A-201ENST00000162749 CCDC39Q9UFE4 941 aa22.33■■□□□ 1.16
TNFRSF1A-201ENST00000162749 RLFQ13129 1914 aa22.32■■□□□ 1.16
TNFRSF1A-201ENST00000162749 LONP1P36776 959 aaKnown RBP22.32■■□□□ 1.16
TNFRSF1A-201ENST00000162749 DTHD1Q6ZMT9 781 aa22.32■■□□□ 1.16
TNFRSF1A-201ENST00000162749 FAM200AQ8TCP9 573 aa22.32■■□□□ 1.16
TNFRSF1A-201ENST00000162749 EMILIN3Q9NT22 766 aa22.32■■□□□ 1.16
TNFRSF1A-201ENST00000162749 ZKSCAN5Q9Y2L8 839 aa22.32■■□□□ 1.16
TNFRSF1A-201ENST00000162749 ZC3H4Q9UPT8 1303 aaKnown RBP22.32■■□□□ 1.16
TNFRSF1A-201ENST00000162749 A0A087WWV3 80 aa22.31■■□□□ 1.16
TNFRSF1A-201ENST00000162749 ADM5C9JUS6 153 aa22.31■■□□□ 1.16
TNFRSF1A-201ENST00000162749 CCDC174Q6PII3 467 aa22.31■■□□□ 1.16
TNFRSF1A-201ENST00000162749 POTEDQ86YR6 584 aa22.31■■□□□ 1.16
TNFRSF1A-201ENST00000162749 ZNF280CQ8ND82 737 aa22.31■■□□□ 1.16
TNFRSF1A-201ENST00000162749 DNAJC25Q9H1X3 360 aa22.31■■□□□ 1.16
TNFRSF1A-201ENST00000162749 ACTN4O43707 911 aaKnown RBP22.31■■□□□ 1.16
TNFRSF1A-201ENST00000162749 TDP2O95551 362 aa22.31■■□□□ 1.16
TNFRSF1A-201ENST00000162749 OR52Z1P0C646 297 aa22.31■■□□□ 1.16
TNFRSF1A-201ENST00000162749 VCAM1P19320 739 aa22.31■■□□□ 1.16
TNFRSF1A-201ENST00000162749 BACE1P56817 501 aa22.31■■□□□ 1.16
TNFRSF1A-201ENST00000162749 PRKG1Q13976 671 aa22.31■■□□□ 1.16
TNFRSF1A-201ENST00000162749 STX1AQ16623 288 aa22.31■■□□□ 1.16
TNFRSF1A-201ENST00000162749 SAMD1Q6SPF0 538 aaPredicted RBP22.31■■□□□ 1.16
TNFRSF1A-201ENST00000162749 ELOA2Q8IYF1 753 aaPredicted RBP22.31■■□□□ 1.16
TNFRSF1A-201ENST00000162749 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.31■■□□□ 1.165e-7■■■□□ 16.6
TNFRSF1A-201ENST00000162749 WDR90Q96KV7 1748 aa22.31■■□□□ 1.16
TNFRSF1A-201ENST00000162749 P2RX7Q99572 595 aaKnown RBP22.31■■□□□ 1.16
TNFRSF1A-201ENST00000162749 SERTAD1Q9UHV2 236 aa22.31■■□□□ 1.16
TNFRSF1A-201ENST00000162749 USP14P54578 494 aa22.3■■□□□ 1.16
TNFRSF1A-201ENST00000162749 AP3B2Q13367 1082 aa22.3■■□□□ 1.16
TNFRSF1A-201ENST00000162749 PNOCQ13519 176 aa22.3■■□□□ 1.16
TNFRSF1A-201ENST00000162749 AS3MTQ9HBK9 375 aa22.3■■□□□ 1.16
TNFRSF1A-201ENST00000162749 COL11A1P12107 1806 aaPredicted RBP22.3■■□□□ 1.16
TNFRSF1A-201ENST00000162749 GLTPD2A6NH11 291 aa22.3■■□□□ 1.16
TNFRSF1A-201ENST00000162749 SLC37A4O43826 429 aa22.3■■□□□ 1.16
TNFRSF1A-201ENST00000162749 USP2O75604 605 aaPredicted RBP22.3■■□□□ 1.16
TNFRSF1A-201ENST00000162749 MDM2Q00987 491 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms