RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Ccdc121E9Q6D3 323 aa16.15■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Gm21969J3QJZ1 289 aa16.15■□□□□ 0.18
Ssr1-204ENSMUST00000225319 EporP14753 507 aa16.15■□□□□ 0.18
Ssr1-204ENSMUST00000225319 SsbP32067 415 aaKnown RBP16.15■□□□□ 0.18
Ssr1-204ENSMUST00000225319 TfrcQ62351 763 aaKnown RBP16.15■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Senp6Q6P7W0 1132 aa16.15■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Phf20Q8BLG0 1010 aaKnown RBP16.15■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Slc5a5Q99PN0 618 aa16.15■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Mrps25Q9D125 171 aaKnown RBP16.15■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Ubiad1Q9DC60 336 aa16.15■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Vnn1Q9Z0K8 512 aa16.15■□□□□ 0.18
Ssr1-204ENSMUST00000225319 Scn3aA2ASI5 1947 aa16.14■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Znf568E9PYI1 671 aa16.14■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Rad51bO35719 350 aa16.14■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Surf1P09925 306 aa16.14■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Cyp2e1Q05421 493 aa16.14■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Gtf2f1Q3THK3 508 aaKnown RBP16.14■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Mapk4Q6P5G0 583 aa16.14■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Usp49Q6P9L4 685 aa16.14■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Gpcpd1Q8C0L9 675 aa16.14■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Bst2Q8R2Q8 172 aa16.14■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Havcr2Q8VIM0 281 aa16.14■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Mmtag2Q99LX5 260 aaKnown RBP16.14■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Arhgef25Q9CWR0 618 aa16.14■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Tubb4aQ9D6F9 444 aa16.14■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Polr2aP08775 1970 aaKnown RBP16.13■□□□□ 0.17
Ssr1-204ENSMUST00000225319 A0A1L1SQF0 893 aa16.13■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Dnaaf5B9EJR8 853 aa16.13■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Gm10134F6ZQC6 126 aa16.13■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Usp17ldG5E8G2 545 aa16.13■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Usp17lcG5E8I7 545 aa16.13■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Nr5a1P33242 462 aa16.13■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Frat1P70339 274 aa16.13■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Sfi1Q3UZY0 1216 aaKnown RBP16.13■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Luc7l2Q7TNC4 392 aaKnown RBP16.13■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Zfp397Q7TNK4 527 aa16.13■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Vps16Q920Q4 839 aa16.13■□□□□ 0.17
Ssr1-204ENSMUST00000225319 LpxnQ99N69 386 aa16.13■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Atp12aQ9Z1W8 1035 aa16.13■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Col24a1Q30D77 1733 aa16.13■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Brca1P48754 1812 aa16.13■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Gm5134E9QAB5 671 aa16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Has3O08650 554 aa16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Il13ra2O88786 383 aa16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Nbr1P97432 988 aa16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Ap5z1Q3U829 807 aa16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Nt5c2Q3V1L4 560 aa16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Oxr1Q4KMM3 866 aa16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Fbxo11Q7TPD1 930 aaKnown RBP16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 BC048507Q80ZS7 89 aa16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Pspc1Q8R326 523 aaKnown RBP16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Anapc4Q91W96 807 aa16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Wdr64Q9D565 1086 aa16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Polr2dQ9D7M8 142 aaKnown RBP16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Arl6ip4Q9JM93 229 aa16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Azi2Q9QYP6 405 aa16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Gm7356A0A087WSA6 508 aa16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Arhgap4B1AUY3 965 aa16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Tpm3-rs7D3Z2H9 248 aa16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Fgl2P12804 432 aa16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 LdhbP16125 334 aaKnown RBP16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Traf1P39428 409 aa16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Tpm1P58771 284 aa16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Atp13a3Q5XF89 1219 aa16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Peg10Q7TN75 958 aaKnown RBP16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Ctdspl2Q8BG15 465 aa16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Dpp7Q9ET22 506 aa16.12■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Map7d1A2AJI0 846 aa16.11■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Card6E9PWH2 1175 aa16.11■□□□□ 0.17
Ssr1-204ENSMUST00000225319 GmnnO88513 206 aa16.11■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Mmp20P57748 482 aa16.11■□□□□ 0.17
Ssr1-204ENSMUST00000225319 GabpaQ00422 454 aa16.11■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Pex1Q5BL07 1284 aa16.11■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Taf3Q5HZG4 932 aa16.11■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Lrrcc1Q69ZB0 1026 aa16.11■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Ccdc148Q6P5U8 527 aa16.11■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Garem2Q6PAJ3 880 aa16.11■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Dnm3Q8BZ98 863 aa16.11■□□□□ 0.17
Ssr1-204ENSMUST00000225319 E2f4Q8R0K9 410 aa16.11■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Glis2Q8VDL9 521 aa16.11■□□□□ 0.17
Ssr1-204ENSMUST00000225319 B3galt4Q9Z0F0 371 aa16.11■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Serpina16D3Z660 418 aa16.1■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Myo1aO88329 1043 aa16.1■□□□□ 0.17
Ssr1-204ENSMUST00000225319 LtkP08923 888 aa16.1■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Meis2P97367 477 aa16.1■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Prr7Q3V0I2 269 aa16.1■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Kcnj11Q61743 390 aa16.1■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Krt87Q6IMF0 495 aa16.1■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Ccdc189Q6NZQ0 333 aa16.1■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Zfp341Q6PGC9 846 aa16.1■□□□□ 0.17
Ssr1-204ENSMUST00000225319 GlyctkQ8QZY2 523 aa16.1■□□□□ 0.17
Ssr1-204ENSMUST00000225319 AdpgkQ8VDL4 496 aa16.1■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Vps33aQ9D2N9 598 aa16.1■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Zcchc17Q9ESX4 241 aaKnown RBP16.1■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Pcdh15Q99PJ1 1943 aa16.09■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Gm5624F6ZZG8 207 aa16.09■□□□□ 0.17
Ssr1-204ENSMUST00000225319 CatspereP0DP43 985 aa16.09■□□□□ 0.17
Ssr1-204ENSMUST00000225319 L1camP11627 1260 aa16.09■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Cdc25aP48964 514 aa16.09■□□□□ 0.17
Ssr1-204ENSMUST00000225319 Rnf216P58283 853 aa16.09■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms