RNA–Protein interactions for RNA: ENSMUST00000019649.3

Ubb-201, Transcript of Polyubiquitin-B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubb, Length 1,499 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubb-201ENSMUST00000019649 Pof1bQ8K4L4 587 aa18.37■□□□□ 0.53
Ubb-201ENSMUST00000019649 Ankrd54Q91WK7 299 aa18.37■□□□□ 0.53
Ubb-201ENSMUST00000019649 Cmtm5Q9D6G9 156 aa18.37■□□□□ 0.53
Ubb-201ENSMUST00000019649 Tll2Q9WVM6 1012 aa18.37■□□□□ 0.53
Ubb-201ENSMUST00000019649 JcadQ5DTX6 1320 aa18.37■□□□□ 0.53
Ubb-201ENSMUST00000019649 Cntnap2Q9CPW0 1332 aa18.37■□□□□ 0.53
Ubb-201ENSMUST00000019649 Metap2O08663 478 aaKnown RBP18.36■□□□□ 0.53
Ubb-201ENSMUST00000019649 PtpreP49446 699 aa18.36■□□□□ 0.53
Ubb-201ENSMUST00000019649 Fbln1Q08879 705 aa18.36■□□□□ 0.53
Ubb-201ENSMUST00000019649 Esyt1Q3U7R1 1092 aaKnown RBP18.36■□□□□ 0.53
Ubb-201ENSMUST00000019649 Oxr1Q4KMM3 866 aa18.36■□□□□ 0.53
Ubb-201ENSMUST00000019649 Ccdc85aQ5SP85 500 aa18.36■□□□□ 0.53
Ubb-201ENSMUST00000019649 PhkbQ7TSH2 1085 aa18.36■□□□□ 0.53
Ubb-201ENSMUST00000019649 SltmQ8CH25 1031 aaKnown RBP18.36■□□□□ 0.53
Ubb-201ENSMUST00000019649 Ubac1Q8VDI7 409 aa18.36■□□□□ 0.53
Ubb-201ENSMUST00000019649 Smc1bQ920F6 1248 aa18.36■□□□□ 0.53
Ubb-201ENSMUST00000019649 Dis3Q9CSH3 958 aaKnown RBP18.36■□□□□ 0.53
Ubb-201ENSMUST00000019649 Znf704Q9ERQ3 566 aa18.36■□□□□ 0.53
Ubb-201ENSMUST00000019649 Lamb2Q61292 1799 aa18.35■□□□□ 0.53
Ubb-201ENSMUST00000019649 Kiaa0100Q5SYL3 2234 aa18.35■□□□□ 0.53
Ubb-201ENSMUST00000019649 A0A1Y7VML8 143 aa18.35■□□□□ 0.53
Ubb-201ENSMUST00000019649 EporP14753 507 aa18.35■□□□□ 0.53
Ubb-201ENSMUST00000019649 Gdf10P97737 476 aa18.35■□□□□ 0.53
Ubb-201ENSMUST00000019649 Tff2Q03404 129 aa18.35■□□□□ 0.53
Ubb-201ENSMUST00000019649 NfrkbQ6PIJ4 1296 aaKnown RBP18.35■□□□□ 0.53
Ubb-201ENSMUST00000019649 Mrpl58Q8R035 206 aa18.35■□□□□ 0.53
Ubb-201ENSMUST00000019649 Ero1aQ8R180 464 aa18.35■□□□□ 0.53
Ubb-201ENSMUST00000019649 Col26a1Q91VF6 440 aa18.35■□□□□ 0.53
Ubb-201ENSMUST00000019649 BrapQ99MP8 591 aa18.35■□□□□ 0.53
Ubb-201ENSMUST00000019649 Slx4ipQ9D7Y9 413 aa18.35■□□□□ 0.53
Ubb-201ENSMUST00000019649 LlphQ9D945 130 aaKnown RBP18.35■□□□□ 0.53
Ubb-201ENSMUST00000019649 Tbx20Q9ES03 445 aa18.35■□□□□ 0.53
Ubb-201ENSMUST00000019649 Gm44511A0A0N4SW10 223 aa18.34■□□□□ 0.53
Ubb-201ENSMUST00000019649 Rnf19bA2A7Q9 732 aa18.34■□□□□ 0.53
Ubb-201ENSMUST00000019649 Dnai2A2AC93 623 aa18.34■□□□□ 0.53
Ubb-201ENSMUST00000019649 Slc6a20bO88575 635 aa18.34■□□□□ 0.53
Ubb-201ENSMUST00000019649 Klrb1bP27812 223 aa18.34■□□□□ 0.53
Ubb-201ENSMUST00000019649 Sept4P28661 478 aa18.34■□□□□ 0.53
Ubb-201ENSMUST00000019649 Trappc3lQ4KL14 181 aa18.34■□□□□ 0.53
Ubb-201ENSMUST00000019649 Cdc14aQ6GQT0 603 aa18.34■□□□□ 0.53
Ubb-201ENSMUST00000019649 Cdkn2aipQ8BI72 563 aa18.34■□□□□ 0.53
Ubb-201ENSMUST00000019649 Lrch3Q8BVU0 778 aa18.34■□□□□ 0.53
Ubb-201ENSMUST00000019649 Cdan1Q8CC12 1239 aa18.34■□□□□ 0.53
Ubb-201ENSMUST00000019649 AnlnQ8K298 1121 aaKnown RBP18.34■□□□□ 0.53
Ubb-201ENSMUST00000019649 Map3k20Q9ESL4 802 aaKnown RBP18.34■□□□□ 0.53
Ubb-201ENSMUST00000019649 Rcan1Q9JHG6 198 aa18.34■□□□□ 0.53
Ubb-201ENSMUST00000019649 Tmem191cQ9JJB1 302 aa18.34■□□□□ 0.53
Ubb-201ENSMUST00000019649 Maged1Q9QYH6 775 aaKnown RBP18.34■□□□□ 0.53
Ubb-201ENSMUST00000019649 Ttc6G3UYY4 1857 aa18.34■□□□□ 0.53
Ubb-201ENSMUST00000019649 Mia3Q8BI84 1930 aa18.34■□□□□ 0.53
Ubb-201ENSMUST00000019649 Btnl4A2CG29 586 aa18.33■□□□□ 0.53
Ubb-201ENSMUST00000019649 Btbd1P58544 488 aa18.33■□□□□ 0.53
Ubb-201ENSMUST00000019649 Cyp2e1Q05421 493 aa18.33■□□□□ 0.53
Ubb-201ENSMUST00000019649 Eepd1Q3TGW2 569 aa18.33■□□□□ 0.53
Ubb-201ENSMUST00000019649 Rasip1Q3U0S6 961 aa18.33■□□□□ 0.53
Ubb-201ENSMUST00000019649 Taco1Q8K0Z7 294 aaKnown RBP18.33■□□□□ 0.53
Ubb-201ENSMUST00000019649 Kdm4bQ91VY5 1086 aa18.33■□□□□ 0.53
Ubb-201ENSMUST00000019649 Nfx1B1AY10 1114 aaKnown RBP18.33■□□□□ 0.52
Ubb-201ENSMUST00000019649 Pdzrn4E9PUZ9 1014 aa18.33■□□□□ 0.52
Ubb-201ENSMUST00000019649 Spata7Q80VP2 582 aa18.33■□□□□ 0.52
Ubb-201ENSMUST00000019649 Tpcn2Q8BWC0 731 aa18.33■□□□□ 0.52
Ubb-201ENSMUST00000019649 Mrpl50Q8VDT9 159 aaKnown RBP18.33■□□□□ 0.52
Ubb-201ENSMUST00000019649 Snx29Q9D3S3 818 aa18.33■□□□□ 0.52
Ubb-201ENSMUST00000019649 AllcQ9JHX6 414 aa18.33■□□□□ 0.52
Ubb-201ENSMUST00000019649 Gcnt4E9Q649 455 aa18.32■□□□□ 0.52
Ubb-201ENSMUST00000019649 Parp1P11103 1013 aaKnown RBP18.32■□□□□ 0.52
Ubb-201ENSMUST00000019649 Irs1P35569 1233 aa18.32■□□□□ 0.52
Ubb-201ENSMUST00000019649 HmgcrQ01237 887 aa18.32■□□□□ 0.52
Ubb-201ENSMUST00000019649 Brd9Q3UQU0 596 aaKnown RBP18.32■□□□□ 0.52
Ubb-201ENSMUST00000019649 Rhpn1Q61085 643 aa18.32■□□□□ 0.52
Ubb-201ENSMUST00000019649 Cln3Q61124 438 aa18.32■□□□□ 0.52
Ubb-201ENSMUST00000019649 Nup88Q8CEC0 753 aaKnown RBP18.32■□□□□ 0.52
Ubb-201ENSMUST00000019649 Rtn1Q8K0T0 780 aa18.32■□□□□ 0.52
Ubb-201ENSMUST00000019649 Cep72Q9D3R3 646 aa18.32■□□□□ 0.52
Ubb-201ENSMUST00000019649 Cyp27a1Q9DBG1 533 aa18.32■□□□□ 0.52
Ubb-201ENSMUST00000019649 Psmd10Q9Z2X2 231 aa18.32■□□□□ 0.52
Ubb-201ENSMUST00000019649 Catsper2A2ARP9 588 aa18.31■□□□□ 0.52
Ubb-201ENSMUST00000019649 Vwa3bJ9JI28 736 aa18.31■□□□□ 0.52
Ubb-201ENSMUST00000019649 Lpar1P61793 364 aa18.31■□□□□ 0.52
Ubb-201ENSMUST00000019649 Rgl1Q60695 768 aa18.31■□□□□ 0.52
Ubb-201ENSMUST00000019649 Ptpn18Q61152 453 aa18.31■□□□□ 0.52
Ubb-201ENSMUST00000019649 Tbc1d5Q80XQ2 815 aa18.31■□□□□ 0.52
Ubb-201ENSMUST00000019649 Tdp1Q8BJ37 609 aa18.31■□□□□ 0.52
Ubb-201ENSMUST00000019649 Zbtb9Q8CDC7 459 aa18.31■□□□□ 0.52
Ubb-201ENSMUST00000019649 PdgfcQ8CI19 345 aa18.31■□□□□ 0.52
Ubb-201ENSMUST00000019649 Gprc5cQ8K3J9 440 aa18.31■□□□□ 0.52
Ubb-201ENSMUST00000019649 Cep89Q9CZX2 791 aa18.31■□□□□ 0.52
Ubb-201ENSMUST00000019649 Galntl5Q9D4M9 431 aa18.31■□□□□ 0.52
Ubb-201ENSMUST00000019649 Kntc1Q8C3Y4 2207 aa18.31■□□□□ 0.52
Ubb-201ENSMUST00000019649 Phactr2B1AVP0 632 aa18.3■□□□□ 0.52
Ubb-201ENSMUST00000019649 MthfslL7N466 203 aa18.3■□□□□ 0.52
Ubb-201ENSMUST00000019649 Cyp2c29Q64458 490 aa18.3■□□□□ 0.52
Ubb-201ENSMUST00000019649 Eif3j2Q66JS6 263 aa18.3■□□□□ 0.52
Ubb-201ENSMUST00000019649 Pramel7Q810Y8 479 aa18.3■□□□□ 0.52
Ubb-201ENSMUST00000019649 Havcr2Q8VIM0 281 aa18.3■□□□□ 0.52
Ubb-201ENSMUST00000019649 Kdm8Q9CXT6 414 aa18.3■□□□□ 0.52
Ubb-201ENSMUST00000019649 Cdc45Q9Z1X9 566 aa18.3■□□□□ 0.52
Ubb-201ENSMUST00000019649 SrcapA0A087WQ44 3271 aa18.3■□□□□ 0.52
Ubb-201ENSMUST00000019649 Wdr19Q3UGF1 1341 aa18.29■□□□□ 0.52
Ubb-201ENSMUST00000019649 Sall1Q9ER74 1322 aa18.29■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms