RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	PHO3	P24031	467 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	YCR099C	P25657	155 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	CCR4	P31384	837 aa	Known RBP	4.68	□□□□□ -1.66
SUP35	YDR172W	DPH5	P32469	300 aa	Predicted RBP	4.68	□□□□□ -1.66
SUP35	YDR172W	PTH2	P34222	208 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	POL12	P38121	705 aa	Predicted RBP	4.68	□□□□□ -1.66
SUP35	YDR172W	FUI1	P38196	639 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	KAP104	P38217	918 aa	Known RBP	4.68	□□□□□ -1.66
SUP35	YDR172W	MNN1	P39106	762 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	BTT1	P40314	149 aa	Predicted RBP	4.68	□□□□□ -1.66
SUP35	YDR172W	YJR061W	P40355	935 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	FAF1	P40546	346 aa	Predicted RBP	4.68	□□□□□ -1.66
SUP35	YDR172W	NUP84	P52891	726 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	STR3	P53101	465 aa	Known RBP	4.68	□□□□□ -1.66
SUP35	YDR172W	CUS2	P53830	285 aa	Predicted RBP	4.68	□□□□□ -1.66
SUP35	YDR172W	RPM2	Q02773	1202 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	NOG1	Q02892	647 aa	Known RBP	4.68	□□□□□ -1.66
SUP35	YDR172W	TAF12	Q03761	539 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	ATG26	Q06321	1198 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	MRH1	Q12117	320 aa	Predicted RBP	4.68	□□□□□ -1.66
SUP35	YDR172W	UPC2	Q12151	913 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	RUP1	Q12242	671 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	MDY2	Q12285	212 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	NDJ1	Q12366	352 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	YLR149C	Q99296	730 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	SEC53	P07283	254 aa	Known RBP	4.68	□□□□□ -1.66
SUP35	YDR172W	TRX2	P22803	104 aa	Known RBP	4.68	□□□□□ -1.66
SUP35	YDR172W	CLB4	P24871	460 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	RAD16	P31244	790 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	KAR9	P32526	644 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	TAT1	P38085	619 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	NUP60	P39705	539 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	VAC8	P39968	578 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	UFE1	P41834	346 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	BST1	P43571	1029 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	AMA1	P50082	593 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	YTP1	P53584	459 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	NCE103	P53615	221 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	YNL010W	P53981	241 aa	Known RBP	4.68	□□□□□ -1.66
SUP35	YDR172W	LSM3	P57743	89 aa	Known RBP	4.68	□□□□□ -1.66
SUP35	YDR172W	RMI1	Q02685	241 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	ESA1	Q08649	445 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	YVC1	Q12324	675 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	SEC39	Q12745	709 aa		4.68	□□□□□ -1.66
SUP35	YDR172W	ATP2	P00830	511 aa	Known RBP	4.67	□□□□□ -1.66
SUP35	YDR172W	SPS1	P08458	490 aa		4.67	□□□□□ -1.66
SUP35	YDR172W	TUB1	P09733	447 aa	Known RBP	4.67	□□□□□ -1.66
SUP35	YDR172W	PEX1	P24004	1043 aa		4.67	□□□□□ -1.66
SUP35	YDR172W	YSP3	P25036	478 aa		4.67	□□□□□ -1.66
SUP35	YDR172W	RBK1	P25332	333 aa		4.67	□□□□□ -1.66
SUP35	YDR172W	ZIP1	P31111	875 aa		4.67	□□□□□ -1.66
SUP35	YDR172W	AEP1	P32493	518 aa		4.67	□□□□□ -1.66
SUP35	YDR172W	YME2	P32843	850 aa		4.67	□□□□□ -1.66
SUP35	YDR172W	ADD66	P36040	267 aa		4.67	□□□□□ -1.66
SUP35	YDR172W	YHB1	P39676	399 aa	Known RBP	4.67	□□□□□ -1.66
SUP35	YDR172W	FMP10	P40098	244 aa		4.67	□□□□□ -1.66
SUP35	YDR172W	COA1	P40452	197 aa		4.67	□□□□□ -1.66
SUP35	YDR172W	SEC28	P40509	296 aa	Known RBP	4.67	□□□□□ -1.66
SUP35	YDR172W	TES1	P41903	349 aa	Known RBP	4.67	□□□□□ -1.66
SUP35	YDR172W	FMP33	P46998	180 aa		4.67	□□□□□ -1.66
SUP35	YDR172W	NOP9	P47077	666 aa	Known RBP	4.67	□□□□□ -1.66
SUP35	YDR172W	GCV1	P48015	400 aa		4.67	□□□□□ -1.66
SUP35	YDR172W	MRX6	P48564	524 aa		4.67	□□□□□ -1.66
SUP35	YDR172W	PRP24	P49960	444 aa	Known RBP	4.67	□□□□□ -1.66
SUP35	YDR172W	SAP4	P53036	818 aa		4.67	□□□□□ -1.66
SUP35	YDR172W	PEX8	P53248	589 aa		4.67	□□□□□ -1.66
SUP35	YDR172W	YNR063W	P53749	607 aa		4.67	□□□□□ -1.66
SUP35	YDR172W	YNL058C	P53947	316 aa		4.67	□□□□□ -1.66
SUP35	YDR172W	ARP4	P80428	489 aa		4.67	□□□□□ -1.66
SUP35	YDR172W	GAS3	Q03655	524 aa		4.67	□□□□□ -1.66
SUP35	YDR172W	GRX3	Q03835	250 aa		4.67	□□□□□ -1.66
SUP35	YDR172W	LDB18	Q07887	179 aa		4.67	□□□□□ -1.66
SUP35	YDR172W	NUS1	Q12063	375 aa		4.67	□□□□□ -1.66
SUP35	YDR172W	ADF1	Q2V2Q1	113 aa		4.67	□□□□□ -1.66
SUP35	YDR172W	TRP3	P00937	484 aa		4.66	□□□□□ -1.66
SUP35	YDR172W	YCR090C	P25654	182 aa	Known RBP	4.66	□□□□□ -1.66
SUP35	YDR172W	TOM20	P35180	183 aa		4.66	□□□□□ -1.66
SUP35	YDR172W	YKR078W	P36158	585 aa	Known RBP	4.66	□□□□□ -1.66
SUP35	YDR172W	KTR4	P38131	464 aa		4.66	□□□□□ -1.66
SUP35	YDR172W	YBL029W	P38201	376 aa		4.66	□□□□□ -1.66
SUP35	YDR172W	MUP3	P38734	546 aa		4.66	□□□□□ -1.66
SUP35	YDR172W	RPS26A	P39938	119 aa	Known RBP	4.66	□□□□□ -1.66
SUP35	YDR172W	RPS26B	P39939	119 aa	Known RBP	4.66	□□□□□ -1.66
SUP35	YDR172W	HAT2	P39984	401 aa		4.66	□□□□□ -1.66
SUP35	YDR172W	RGI2	P40188	164 aa		4.66	□□□□□ -1.66
SUP35	YDR172W	GVP36	P40531	326 aa	Known RBP	4.66	□□□□□ -1.66
SUP35	YDR172W	RLP7	P40693	322 aa	Known RBP	4.66	□□□□□ -1.66
SUP35	YDR172W	DIM1	P41819	318 aa	Known RBP	4.66	□□□□□ -1.66
SUP35	YDR172W	YJR154W	P47181	346 aa		4.66	□□□□□ -1.66
SUP35	YDR172W	BOL2	P53082	120 aa		4.66	□□□□□ -1.66
SUP35	YDR172W	ARI1	P53111	347 aa	Known RBP	4.66	□□□□□ -1.66
SUP35	YDR172W	NMA2	P53204	395 aa		4.66	□□□□□ -1.66
SUP35	YDR172W	SPR28	Q04921	423 aa		4.66	□□□□□ -1.66
SUP35	YDR172W	RIF2	Q06208	395 aa		4.66	□□□□□ -1.66
SUP35	YDR172W	CDA1	Q06702	301 aa		4.66	□□□□□ -1.66
SUP35	YDR172W	NKP1	Q12493	238 aa		4.66	□□□□□ -1.66
SUP35	YDR172W	AAT2	P23542	418 aa	Known RBP	4.66	□□□□□ -1.66
SUP35	YDR172W	DCC1	P25559	380 aa		4.66	□□□□□ -1.66
SUP35	YDR172W	SGE1	P33335	543 aa		4.66	□□□□□ -1.66
SUP35	YDR172W	ALY1	P36117	915 aa		4.66	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms