RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W ORC6P38826 435 aa0.72□□□□□ -2.29
UTP20YBL004W UTP18P40362 594 aaPredicted RBP0.72□□□□□ -2.29
UTP20YBL004W PSA1P41940 361 aaKnown RBP0.72□□□□□ -2.29
UTP20YBL004W NOG2P53742 486 aaKnown RBP0.72□□□□□ -2.29
UTP20YBL004W DUG3P53871 357 aa0.72□□□□□ -2.29
UTP20YBL004W YLR297WQ05899 129 aa0.72□□□□□ -2.29
UTP20YBL004W BDS1Q08347 646 aa0.72□□□□□ -2.29
UTP20YBL004W ISY1P21374 235 aaPredicted RBP0.72□□□□□ -2.29
UTP20YBL004W PAT1P25644 796 aaKnown RBP0.72□□□□□ -2.29
UTP20YBL004W PLB1P39105 664 aa0.72□□□□□ -2.29
UTP20YBL004W PUN1Q06991 263 aa0.72□□□□□ -2.29
UTP20YBL004W YPR027CQ12079 277 aa0.72□□□□□ -2.29
UTP20YBL004W YLR046CQ12253 270 aa0.72□□□□□ -2.29
UTP20YBL004W PNO1Q99216 274 aaKnown RBP0.72□□□□□ -2.29
UTP20YBL004W SPT15P13393 240 aaKnown RBP0.72□□□□□ -2.29
UTP20YBL004W RDS1P25611 832 aa0.72□□□□□ -2.29
UTP20YBL004W PRE2P30656 287 aaKnown RBP0.72□□□□□ -2.29
UTP20YBL004W TRZ1P36159 838 aaPredicted RBP0.72□□□□□ -2.29
UTP20YBL004W RRP8P38961 392 aaKnown RBP0.72□□□□□ -2.29
UTP20YBL004W TMA108P40462 946 aa0.72□□□□□ -2.29
UTP20YBL004W CFD1P40558 293 aa0.72□□□□□ -2.29
UTP20YBL004W YGL081WP53156 320 aa0.72□□□□□ -2.29
UTP20YBL004W PAP2P53632 584 aaKnown RBP0.72□□□□□ -2.29
UTP20YBL004W ESF2P53743 316 aaKnown RBP0.72□□□□□ -2.29
UTP20YBL004W TEX1P53851 422 aaKnown RBP0.72□□□□□ -2.29
UTP20YBL004W NGL2Q03264 515 aaKnown RBP0.72□□□□□ -2.29
UTP20YBL004W MTQ2Q03920 221 aaPredicted RBP0.72□□□□□ -2.29
UTP20YBL004W PRM6Q04705 352 aa0.72□□□□□ -2.29
UTP20YBL004W CIA1Q05583 330 aa0.72□□□□□ -2.29
UTP20YBL004W ADY3Q07732 790 aa0.72□□□□□ -2.29
UTP20YBL004W BRR1Q99177 341 aaPredicted RBP0.72□□□□□ -2.29
UTP20YBL004W CBP6P07253 162 aaPredicted RBP0.72□□□□□ -2.29
UTP20YBL004W DAT1P13483 248 aaKnown RBP0.72□□□□□ -2.29
UTP20YBL004W CBP3P21560 335 aa0.72□□□□□ -2.29
UTP20YBL004W UBA1P22515 1024 aaKnown RBP0.72□□□□□ -2.29
UTP20YBL004W GCG1P32656 232 aaKnown RBP0.72□□□□□ -2.29
UTP20YBL004W TUL1P36096 758 aa0.72□□□□□ -2.29
UTP20YBL004W MNT3P40549 630 aa0.72□□□□□ -2.29
UTP20YBL004W PPT1P53043 513 aa0.72□□□□□ -2.29
UTP20YBL004W VEL1P53058 206 aa0.72□□□□□ -2.29
UTP20YBL004W RRP46P53256 223 aaPredicted RBP0.72□□□□□ -2.29
UTP20YBL004W CDC55Q00362 526 aa0.72□□□□□ -2.29
UTP20YBL004W CSM3Q04659 317 aa0.72□□□□□ -2.29
UTP20YBL004W PET123P17558 318 aa0.71□□□□□ -2.3
UTP20YBL004W GEX1P25596 615 aa0.71□□□□□ -2.3
UTP20YBL004W SEC6P32844 805 aa0.71□□□□□ -2.3
UTP20YBL004W GEX2P36173 615 aa0.71□□□□□ -2.3
UTP20YBL004W TDP1P38319 544 aa0.71□□□□□ -2.3
UTP20YBL004W TAT2P38967 592 aa0.71□□□□□ -2.3
UTP20YBL004W RPS26AP39938 119 aaKnown RBP0.71□□□□□ -2.3
UTP20YBL004W RPS26BP39939 119 aaKnown RBP0.71□□□□□ -2.3
UTP20YBL004W TOK1P40310 691 aa0.71□□□□□ -2.3
UTP20YBL004W ENT3P47160 408 aa0.71□□□□□ -2.3
UTP20YBL004W ASN1P49089 572 aaKnown RBP0.71□□□□□ -2.3
UTP20YBL004W MTQ1P53944 314 aa0.71□□□□□ -2.3
UTP20YBL004W YNL011CP53980 444 aa0.71□□□□□ -2.3
UTP20YBL004W YPR089WO13585 888 aa0.71□□□□□ -2.3
UTP20YBL004W HTA1P04911 132 aaKnown RBP0.71□□□□□ -2.3
UTP20YBL004W HTA2P04912 132 aa0.71□□□□□ -2.3
UTP20YBL004W PXL1P36166 706 aa0.71□□□□□ -2.3
UTP20YBL004W HXT13P39924 564 aa0.71□□□□□ -2.3
UTP20YBL004W TRM12Q04235 462 aa0.71□□□□□ -2.3
UTP20YBL004W RRP45Q05636 305 aaKnown RBP0.71□□□□□ -2.3
UTP20YBL004W HSP60P19882 572 aaKnown RBP0.71□□□□□ -2.3
UTP20YBL004W NAM9P27929 486 aa0.71□□□□□ -2.3
UTP20YBL004W RPD3P32561 433 aa0.71□□□□□ -2.3
UTP20YBL004W FBP26P32604 452 aa0.71□□□□□ -2.3
UTP20YBL004W PFK26P40433 827 aaKnown RBP0.71□□□□□ -2.3
UTP20YBL004W ICE2P40499 491 aa0.71□□□□□ -2.3
UTP20YBL004W YJL049WP47048 450 aa0.71□□□□□ -2.3
UTP20YBL004W YMR178WQ03219 274 aaKnown RBP0.71□□□□□ -2.3
UTP20YBL004W GMC1Q04399 608 aa0.71□□□□□ -2.3
UTP20YBL004W YLR122CQ12312 125 aa0.71□□□□□ -2.3
UTP20YBL004W MRP10O75012 95 aa0.71□□□□□ -2.3
UTP20YBL004W PHO5P00635 467 aa0.71□□□□□ -2.3
UTP20YBL004W RPL22AP05749 121 aaKnown RBP0.71□□□□□ -2.3
UTP20YBL004W RAD52P06778 471 aaKnown RBP0.71□□□□□ -2.3
UTP20YBL004W RHO1P06780 209 aaKnown RBP0.71□□□□□ -2.3
UTP20YBL004W MSP1P28737 362 aa0.71□□□□□ -2.3
UTP20YBL004W SPS19P32573 292 aaKnown RBP0.71□□□□□ -2.3
UTP20YBL004W YGR079WP53249 370 aa0.71□□□□□ -2.3
UTP20YBL004W SED5Q01590 340 aa0.71□□□□□ -2.3
UTP20YBL004W RPN7Q06103 429 aaKnown RBP0.71□□□□□ -2.3
UTP20YBL004W MHR1Q06630 226 aa0.71□□□□□ -2.3
UTP20YBL004W TDH3P00359 332 aaKnown RBP RIP-Chip data0.71□□□□□ -2.3not detected
UTP20YBL004W MRPL8P22353 238 aa0.71□□□□□ -2.3
UTP20YBL004W ATS1P31386 333 aa0.71□□□□□ -2.3
UTP20YBL004W DCG1P32460 244 aa0.71□□□□□ -2.3
UTP20YBL004W YRA2P36036 203 aaKnown RBP RIP-Chip data0.71□□□□□ -2.3not detected
UTP20YBL004W YKL069WP36088 180 aa0.71□□□□□ -2.3
UTP20YBL004W MNL1P38888 796 aa0.71□□□□□ -2.3
UTP20YBL004W YIR020CP40575 100 aa0.71□□□□□ -2.3
UTP20YBL004W ACF4P47129 309 aa0.71□□□□□ -2.3
UTP20YBL004W REG1Q00816 1014 aa0.71□□□□□ -2.3
UTP20YBL004W PFA5Q03289 374 aa0.71□□□□□ -2.3
UTP20YBL004W YLR281CQ05863 155 aa0.71□□□□□ -2.3
UTP20YBL004W PSR1Q07800 427 aa0.71□□□□□ -2.3
UTP20YBL004W POL2P21951 2222 aaKnown RBP0.71□□□□□ -2.3
UTP20YBL004W REP2P03872 296 aa0.71□□□□□ -2.3
UTP20YBL004W CMP2P14747 604 aa0.71□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms