RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 ZBTB5O15062 677 aa14.96□□□□□ -0.01
PHGDH-218ENST00000641491 FMNL1O95466 1100 aaPredicted RBP14.96□□□□□ -0.01
PHGDH-218ENST00000641491 HOXA7P31268 230 aaPredicted RBP14.96□□□□□ -0.01
PHGDH-218ENST00000641491 CCNA1P78396 465 aa14.96□□□□□ -0.01
PHGDH-218ENST00000641491 KIF23Q02241 960 aaPredicted RBP14.96□□□□□ -0.01
PHGDH-218ENST00000641491 SAFBQ15424 915 aaKnown RBP eCLIP14.96□□□□□ -0.01
PHGDH-218ENST00000641491 TTBK2Q6IQ55 1244 aa14.96□□□□□ -0.01
PHGDH-218ENST00000641491 RASGRP2Q7LDG7 609 aa14.96□□□□□ -0.01
PHGDH-218ENST00000641491 FBXO11Q86XK2 927 aa14.96□□□□□ -0.01
PHGDH-218ENST00000641491 CMTR1Q8N1G2 835 aaKnown RBP14.96□□□□□ -0.01
PHGDH-218ENST00000641491 SRBD1Q8N5C6 995 aaKnown RBP14.96□□□□□ -0.01
PHGDH-218ENST00000641491 ZNF713Q8N859 430 aaPredicted RBP14.96□□□□□ -0.01
PHGDH-218ENST00000641491 BRI3BPQ8WY22 251 aa14.96□□□□□ -0.01
PHGDH-218ENST00000641491 ASCC2Q9H1I8 757 aaPredicted RBP14.96□□□□□ -0.01
PHGDH-218ENST00000641491 PRR12Q9ULL5 1215 aa14.96□□□□□ -0.01
PHGDH-218ENST00000641491 CNTNAP5Q8WYK1 1306 aa14.95□□□□□ -0.02
PHGDH-218ENST00000641491 STK36Q9NRP7 1315 aa14.95□□□□□ -0.02
PHGDH-218ENST00000641491 PNMA6FA0A0J9YX94 578 aa14.95□□□□□ -0.02
PHGDH-218ENST00000641491 PRPF3O43395 683 aaKnown RBP14.95□□□□□ -0.02
PHGDH-218ENST00000641491 GJB2P29033 226 aa14.95□□□□□ -0.02
PHGDH-218ENST00000641491 DSG3P32926 999 aa14.95□□□□□ -0.02
PHGDH-218ENST00000641491 COPB2P35606 906 aa14.95□□□□□ -0.02
PHGDH-218ENST00000641491 GCLCP48506 637 aaPredicted RBP14.95□□□□□ -0.02
PHGDH-218ENST00000641491 HERVK_113P62684 666 aa14.95□□□□□ -0.02
PHGDH-218ENST00000641491 BTNL9Q6UXG8 535 aa14.95□□□□□ -0.02
PHGDH-218ENST00000641491 MS4A4AQ96JQ5 239 aa14.95□□□□□ -0.02
PHGDH-218ENST00000641491 PIGSQ96S52 555 aa14.95□□□□□ -0.02
PHGDH-218ENST00000641491 AMNQ9BXJ7 453 aa14.95□□□□□ -0.02
PHGDH-218ENST00000641491 CCPG1Q9ULG6 757 aa14.95□□□□□ -0.02
PHGDH-218ENST00000641491 V9GY48 417 aaPredicted RBP14.95□□□□□ -0.02
PHGDH-218ENST00000641491 PPFIA3O75145 1194 aa14.94□□□□□ -0.02
PHGDH-218ENST00000641491 SCG2P13521 617 aa14.94□□□□□ -0.02
PHGDH-218ENST00000641491 NAPAP54920 295 aa14.94□□□□□ -0.02
PHGDH-218ENST00000641491 SOX10P56693 466 aa14.94□□□□□ -0.02
PHGDH-218ENST00000641491 USH1GQ495M9 461 aa14.94□□□□□ -0.02
PHGDH-218ENST00000641491 KIAA1755Q5JYT7 1200 aa14.94□□□□□ -0.02
PHGDH-218ENST00000641491 WDR78Q5VTH9 848 aa14.94□□□□□ -0.02
PHGDH-218ENST00000641491 IFNL1Q8IU54 200 aa14.94□□□□□ -0.02
PHGDH-218ENST00000641491 CPXCR1Q8N123 301 aa14.94□□□□□ -0.02
PHGDH-218ENST00000641491 NSUN7Q8NE18 718 aaKnown RBP14.94□□□□□ -0.02
PHGDH-218ENST00000641491 CUL5Q93034 780 aa14.94□□□□□ -0.02
PHGDH-218ENST00000641491 ATG4CQ96DT6 458 aa14.94□□□□□ -0.02
PHGDH-218ENST00000641491 ZIC5Q96T25 663 aa14.94□□□□□ -0.02
PHGDH-218ENST00000641491 ALG1Q9BT22 464 aa14.94□□□□□ -0.02
PHGDH-218ENST00000641491 CPVLQ9H3G5 476 aa14.94□□□□□ -0.02
PHGDH-218ENST00000641491 FBXO28Q9NVF7 368 aa14.94□□□□□ -0.02
PHGDH-218ENST00000641491 TESPA1A2RU30 521 aaPredicted RBP14.93□□□□□ -0.02
PHGDH-218ENST00000641491 FAM155AB1AL88 458 aaPredicted RBP14.93□□□□□ -0.02
PHGDH-218ENST00000641491 VWA5AO00534 786 aa14.93□□□□□ -0.02
PHGDH-218ENST00000641491 PDIA4P13667 645 aaKnown RBP14.93□□□□□ -0.02
PHGDH-218ENST00000641491 FOSBP53539 338 aa14.93□□□□□ -0.02
PHGDH-218ENST00000641491 OAZ1P54368 228 aa14.93□□□□□ -0.02
PHGDH-218ENST00000641491 CUL4AQ13619 759 aa14.93□□□□□ -0.02
PHGDH-218ENST00000641491 QRICH1Q2TAL8 776 aa14.93□□□□□ -0.02
PHGDH-218ENST00000641491 PPP1R18Q6NYC8 613 aa14.93□□□□□ -0.02
PHGDH-218ENST00000641491 BICD2Q8TD16 824 aa14.93□□□□□ -0.02
PHGDH-218ENST00000641491 C8orf76Q96K31 380 aa14.93□□□□□ -0.02
PHGDH-218ENST00000641491 IPO9Q96P70 1041 aaKnown RBP14.93□□□□□ -0.02
PHGDH-218ENST00000641491 TEX13BQ9BXU2 312 aa14.93□□□□□ -0.02
PHGDH-218ENST00000641491 GLT8D2Q9H1C3 349 aa14.93□□□□□ -0.02
PHGDH-218ENST00000641491 RANBP17Q9H2T7 1088 aaKnown RBP14.93□□□□□ -0.02
PHGDH-218ENST00000641491 RIOX1Q9H6W3 641 aa14.93□□□□□ -0.02
PHGDH-218ENST00000641491 JMJD4Q9H9V9 463 aa14.93□□□□□ -0.02
PHGDH-218ENST00000641491 SAGE1Q9NXZ1 904 aa14.93□□□□□ -0.02
PHGDH-218ENST00000641491 MRPL11Q9Y3B7 192 aaKnown RBP14.93□□□□□ -0.02
PHGDH-218ENST00000641491 ABCB11O95342 1321 aa14.92□□□□□ -0.02
PHGDH-218ENST00000641491 hCG_1642624A0A1W2PR95 340 aa14.92□□□□□ -0.02
PHGDH-218ENST00000641491 SPDYE16A6NNV3 312 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-218ENST00000641491 JAK2O60674 1132 aa14.92□□□□□ -0.02
PHGDH-218ENST00000641491 ICAM1P05362 532 aa14.92□□□□□ -0.02
PHGDH-218ENST00000641491 CYP2C8P10632 490 aa14.92□□□□□ -0.02
PHGDH-218ENST00000641491 CALML3P27482 149 aa14.92□□□□□ -0.02
PHGDH-218ENST00000641491 NLRP5P59047 1200 aa14.92□□□□□ -0.02
PHGDH-218ENST00000641491 PFKFB3Q16875 520 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-218ENST00000641491 TKFCQ3LXA3 575 aa14.92□□□□□ -0.02
PHGDH-218ENST00000641491 SNRNP48Q6IEG0 339 aaKnown RBP14.92□□□□□ -0.02
PHGDH-218ENST00000641491 GPAT2Q6NUI2 795 aa14.92□□□□□ -0.02
PHGDH-218ENST00000641491 FAM43AQ8N2R8 423 aa14.92□□□□□ -0.02
PHGDH-218ENST00000641491 P2RX7Q99572 595 aaKnown RBP14.92□□□□□ -0.02
PHGDH-218ENST00000641491 SLC38A10Q9HBR0 1119 aa14.92□□□□□ -0.02
PHGDH-218ENST00000641491 RAVER2Q9HCJ3 691 aaKnown RBP14.92□□□□□ -0.02
PHGDH-218ENST00000641491 C6orf50Q9HD87 102 aa14.92□□□□□ -0.02
PHGDH-218ENST00000641491 RABGAP1Q9Y3P9 1069 aa14.92□□□□□ -0.02
PHGDH-218ENST00000641491 PCDHA1Q9Y5I3 950 aa14.92□□□□□ -0.02
PHGDH-218ENST00000641491 SLC25A27O95847 323 aa14.91□□□□□ -0.02
PHGDH-218ENST00000641491 ALAS1P13196 640 aa14.91□□□□□ -0.02
PHGDH-218ENST00000641491 GNA11P29992 359 aa14.91□□□□□ -0.02
PHGDH-218ENST00000641491 STAT3P40763 770 aa14.91□□□□□ -0.02
PHGDH-218ENST00000641491 TM4SF4P48230 202 aa14.91□□□□□ -0.02
PHGDH-218ENST00000641491 SNAP25P60880 206 aa14.91□□□□□ -0.02
PHGDH-218ENST00000641491 KIF22Q14807 665 aa14.91□□□□□ -0.02
PHGDH-218ENST00000641491 LARP1BQ659C4 914 aaKnown RBP14.91□□□□□ -0.02
PHGDH-218ENST00000641491 NCAPG2Q86XI2 1143 aa14.91□□□□□ -0.02
PHGDH-218ENST00000641491 MCF2L2Q86YR7 1114 aa14.91□□□□□ -0.02
PHGDH-218ENST00000641491 FAM177A1Q8N128 213 aaPredicted RBP14.91□□□□□ -0.02
PHGDH-218ENST00000641491 GPRC5AQ8NFJ5 357 aa14.91□□□□□ -0.02
PHGDH-218ENST00000641491 EHMT1Q9H9B1 1298 aa14.91□□□□□ -0.02
PHGDH-218ENST00000641491 HOMER2Q9NSB8 354 aa14.91□□□□□ -0.02
PHGDH-218ENST00000641491 FAM217BQ9NTX9 383 aaPredicted RBP14.91□□□□□ -0.02
PHGDH-218ENST00000641491 FBXO40Q9UH90 709 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms