RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 RABEP2Q9H5N1 569 aa15.89■□□□□ 0.13
SCARB2-208ENST00000638372 MED14O60244 1454 aa15.89■□□□□ 0.13
SCARB2-208ENST00000638372 IVLP07476 585 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 ATP1A3P13637 1013 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 PABPC4Q13310 644 aaKnown RBP eCLIP15.88■□□□□ 0.13
SCARB2-208ENST00000638372 CPLX4Q7Z7G2 160 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 NBPF11Q86T75 865 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.88■□□□□ 0.13
SCARB2-208ENST00000638372 AMNQ9BXJ7 453 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 DKC1O60832 514 aaKnown RBP eCLIP15.88■□□□□ 0.13
SCARB2-208ENST00000638372 POLR2MP0CAP2 368 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 COPB1P53618 953 aaKnown RBP15.88■□□□□ 0.13
SCARB2-208ENST00000638372 TRPC3Q13507 836 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 RPS6KA1Q15418 735 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 PEX26Q7Z412 305 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 PLA2G4DQ86XP0 818 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 FAM178BQ8IXR5 827 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 SAMSN1Q9NSI8 373 aaKnown RBP15.88■□□□□ 0.13
SCARB2-208ENST00000638372 MINPP1Q9UNW1 487 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 CRB1P82279 1406 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 TTLL1O95922 423 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 CYB5R4Q7L1T6 521 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 ZNF354CQ86Y25 554 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.88■□□□□ 0.13
SCARB2-208ENST00000638372 HINFPQ9BQA5 517 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 KCNK9Q9NPC2 374 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 STK24Q9Y6E0 443 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 CACNB1Q02641 598 aaPredicted RBP15.88■□□□□ 0.13
SCARB2-208ENST00000638372 ADAM9Q13443 819 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 LRRC41Q15345 812 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 DAAM2Q86T65 1068 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 TUBGCP2Q9BSJ2 902 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 CPVLQ9H3G5 476 aa15.88■□□□□ 0.13
SCARB2-208ENST00000638372 STAT1P42224 750 aa15.87■□□□□ 0.13
SCARB2-208ENST00000638372 TNFAIP1Q13829 316 aa15.87■□□□□ 0.13
SCARB2-208ENST00000638372 PSMD1Q99460 953 aa15.87■□□□□ 0.13
SCARB2-208ENST00000638372 MYO1AQ9UBC5 1043 aa15.87■□□□□ 0.13
SCARB2-208ENST00000638372 EPN1Q9Y6I3 576 aaPredicted RBP15.87■□□□□ 0.13
SCARB2-208ENST00000638372 POLR2FP61218 127 aaKnown RBP15.87■□□□□ 0.13
SCARB2-208ENST00000638372 FOXO4P98177 505 aa15.87■□□□□ 0.13
SCARB2-208ENST00000638372 GRAPQ13588 217 aa15.87■□□□□ 0.13
SCARB2-208ENST00000638372 SMIM5Q71RC9 77 aa15.87■□□□□ 0.13
SCARB2-208ENST00000638372 MSANTD4Q8NCY6 345 aa15.87■□□□□ 0.13
SCARB2-208ENST00000638372 GRAPLQ8TC17 118 aaPredicted RBP15.87■□□□□ 0.13
SCARB2-208ENST00000638372 DDX12PQ92771 950 aa15.87■□□□□ 0.13
SCARB2-208ENST00000638372 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.87■□□□□ 0.13
SCARB2-208ENST00000638372 COMMD10Q9Y6G5 202 aa15.87■□□□□ 0.13
SCARB2-208ENST00000638372 IVNS1ABPQ9Y6Y0 642 aa15.87■□□□□ 0.13
SCARB2-208ENST00000638372 NEDD4P46934 1319 aa15.87■□□□□ 0.13
SCARB2-208ENST00000638372 CD19P15391 556 aa15.87■□□□□ 0.13
SCARB2-208ENST00000638372 TNNI1P19237 187 aa15.87■□□□□ 0.13
SCARB2-208ENST00000638372 ERCC5P28715 1186 aaPredicted RBP15.87■□□□□ 0.13
SCARB2-208ENST00000638372 SND1Q7KZF4 910 aaKnown RBP eCLIP15.87■□□□□ 0.132e-6■■□□□ 13.9
SCARB2-208ENST00000638372 SEPT12Q8IYM1 358 aa15.87■□□□□ 0.13
SCARB2-208ENST00000638372 TMEM87AQ8NBN3 555 aa15.87■□□□□ 0.13
SCARB2-208ENST00000638372 LARP4BQ92615 738 aaKnown RBP15.87■□□□□ 0.13
SCARB2-208ENST00000638372 AZI2Q9H6S1 392 aa15.87■□□□□ 0.13
SCARB2-208ENST00000638372 MAN1B1Q9UKM7 699 aa15.87■□□□□ 0.13
SCARB2-208ENST00000638372 MRPL11Q9Y3B7 192 aaKnown RBP15.87■□□□□ 0.13
SCARB2-208ENST00000638372 PRPF3O43395 683 aaKnown RBP15.87■□□□□ 0.13
SCARB2-208ENST00000638372 RPS6KA4O75676 772 aa15.87■□□□□ 0.13
SCARB2-208ENST00000638372 BCRP11274 1271 aa15.87■□□□□ 0.13
SCARB2-208ENST00000638372 ASPRV1Q53RT3 343 aa15.87■□□□□ 0.13
SCARB2-208ENST00000638372 U2AF1L4Q8WU68 220 aaKnown RBP15.87■□□□□ 0.13
SCARB2-208ENST00000638372 NAP1L3Q99457 506 aaPredicted RBP15.87■□□□□ 0.13
SCARB2-208ENST00000638372 RAD17O75943 681 aa15.86■□□□□ 0.13
SCARB2-208ENST00000638372 GLG1Q92896 1179 aa15.86■□□□□ 0.13
SCARB2-208ENST00000638372 PAGR1Q9BTK6 254 aa15.86■□□□□ 0.13
SCARB2-208ENST00000638372 USTQ9Y2C2 406 aa15.86■□□□□ 0.13
SCARB2-208ENST00000638372 PTPRMP28827 1452 aa15.86■□□□□ 0.13
SCARB2-208ENST00000638372 BUB1O43683 1085 aa15.86■□□□□ 0.13
SCARB2-208ENST00000638372 IRX3P78415 501 aaPredicted RBP15.86■□□□□ 0.13
SCARB2-208ENST00000638372 CFAP221Q4G0U5 840 aa15.86■□□□□ 0.13
SCARB2-208ENST00000638372 SLFN12Q8IYM2 578 aa15.86■□□□□ 0.13
SCARB2-208ENST00000638372 KIAA1524Q8TCG1 905 aa15.86■□□□□ 0.13
SCARB2-208ENST00000638372 CNOT6LQ96LI5 555 aaKnown RBP15.86■□□□□ 0.13
SCARB2-208ENST00000638372 IKBKBO14920 756 aa15.86■□□□□ 0.13
SCARB2-208ENST00000638372 CCDC127Q96BQ5 260 aa15.86■□□□□ 0.13
SCARB2-208ENST00000638372 LARSQ9P2J5 1176 aaKnown RBP15.86■□□□□ 0.13
SCARB2-208ENST00000638372 SETBP1Q9Y6X0 1596 aa15.86■□□□□ 0.13
SCARB2-208ENST00000638372 CACNB3P54284 484 aa15.85■□□□□ 0.13
SCARB2-208ENST00000638372 XKR9Q5GH70 373 aa15.85■□□□□ 0.13
SCARB2-208ENST00000638372 KRT27Q7Z3Y8 459 aa15.85■□□□□ 0.13
SCARB2-208ENST00000638372 SLC44A5Q8NCS7 719 aa15.85■□□□□ 0.13
SCARB2-208ENST00000638372 FAM102BQ5T8I3 360 aa15.85■□□□□ 0.13
SCARB2-208ENST00000638372 NUCKS1Q9H1E3 243 aaKnown RBP15.85■□□□□ 0.13
SCARB2-208ENST00000638372 SRPRBQ9Y5M8 271 aaKnown RBP15.85■□□□□ 0.13
SCARB2-208ENST00000638372 NMT2O60551 498 aa15.85■□□□□ 0.13
SCARB2-208ENST00000638372 CDK8P49336 464 aa15.85■□□□□ 0.13
SCARB2-208ENST00000638372 IFT20Q8IY31 132 aa15.85■□□□□ 0.13
SCARB2-208ENST00000638372 MRRFQ96E11 262 aaKnown RBP15.85■□□□□ 0.13
SCARB2-208ENST00000638372 GNA14O95837 355 aa15.85■□□□□ 0.13
SCARB2-208ENST00000638372 MNAT1P51948 309 aa15.85■□□□□ 0.13
SCARB2-208ENST00000638372 ARHGEF16Q5VV41 709 aa15.85■□□□□ 0.13
SCARB2-208ENST00000638372 ATG9AQ7Z3C6 839 aa15.85■□□□□ 0.13
SCARB2-208ENST00000638372 UBL4BQ8N7F7 174 aa15.85■□□□□ 0.13
SCARB2-208ENST00000638372 KANSL2Q9H9L4 492 aa15.85■□□□□ 0.13
SCARB2-208ENST00000638372 CCPG1Q9ULG6 757 aa15.85■□□□□ 0.13
SCARB2-208ENST00000638372 COL4A3BPQ9Y5P4 624 aa15.85■□□□□ 0.13
SCARB2-208ENST00000638372 TBC1D10BQ4KMP7 808 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms