RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 EVCP57679 992 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 TBC1D8BQ0IIM8 1120 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 KIF22Q14807 665 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 BBS9Q3SYG4 887 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 IQCEQ6IPM2 695 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 FIP1L1Q6UN15 594 aaKnown RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 NLRP14Q86W24 1093 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 RNF10Q8N5U6 811 aaKnown RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 APPL2Q8NEU8 664 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 DHX58Q96C10 678 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 LRRC45Q96CN5 670 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 TSC22D3Q99576 134 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 NACAP1Q9BZK3 213 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 EDEM3Q9BZQ6 932 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 NDEL1Q9GZM8 345 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 TRPV5Q9NQA5 729 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 HOMER2Q9NSB8 354 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 HOMER3Q9NSC5 361 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 ABCF3Q9NUQ8 709 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 SPG7Q9UQ90 795 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 BHMG1C9JSJ3 638 aaPredicted RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 SPECC1L-ADORA2AF8WAN1 911 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 SLC27A2O14975 620 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 PDGFRBP09619 1106 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 RASA1P20936 1047 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 HDAC4P56524 1084 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 GPSM2P81274 684 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 NFIAQ12857 509 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 MVPQ14764 893 aaKnown RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 ANGPTL8Q6UXH0 198 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 PACS2Q86VP3 889 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 DDX42Q86XP3 938 aaKnown RBP eCLIP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 RPAP2Q8IXW5 612 aaPredicted RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 DZIP1LQ8IYY4 767 aaKnown RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 ZNF75CPQ92670 426 aaPredicted RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 MTMR9Q96QG7 549 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 POLR3EQ9NVU0 708 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 DDX19BQ9UMR2 479 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 GTF2A1LQ9UNN4 478 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 ELP1O95163 1332 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 NCKAP5LQ9HCH0 1330 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 UBR1Q8IWV7 1749 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 ATP7AQ04656 1500 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 RASSF10A6NK89 507 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 EIF3CLB5ME19 914 aaKnown RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 SMIM24O75264 130 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 KATNA1O75449 491 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 CYP1A2P05177 515 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 ATF7P17544 494 aaPredicted RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 ENPP1P22413 925 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 PTGS2P35354 604 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 MAPK9P45984 424 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 SCNN1BP51168 640 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 RCAN1P53805 252 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 DYNC1I2Q13409 638 aaKnown RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 HLTFQ14527 1009 aaKnown RBP eCLIP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 LRRC41Q15345 812 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 GRAMD4Q6IC98 578 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 TTC39CQ8N584 583 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 TAB3Q8N5C8 712 aaPredicted RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 TMEM57Q8N5G2 664 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 TMEM87AQ8NBN3 555 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 OTUD5Q96G74 571 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 RPGRIP1Q96KN7 1286 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 EIF3CQ99613 913 aaKnown RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 EIF2AQ9BY44 585 aaKnown RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 CASS4Q9NQ75 786 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 TCP11L1Q9NUJ3 509 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 PYCARDQ9ULZ3 195 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 ATP6V1DQ9Y5K8 247 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 TET3O43151 1660 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 SPDYE16A6NNV3 312 aaPredicted RBP4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 POM121CA8CG34 1229 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 RTN3O95197 1032 aaPredicted RBP4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 GUCA1CO95843 209 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 ZSCAN22P10073 491 aaPredicted RBP4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 S100A5P33763 92 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 RBM6P78332 1123 aaKnown RBP4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 DR1Q01658 176 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 SIM2Q14190 667 aaPredicted RBP4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 OASLQ15646 514 aaKnown RBP4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 HSP90AA4PQ58FG1 418 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 FBXO38Q6PIJ6 1188 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 BTNL9Q6UXG8 535 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 TAOK1Q7L7X3 1001 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 MFN1Q8IWA4 741 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 TRIM22Q8IYM9 498 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 MDM1Q8TC05 714 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 GIMAP1Q8WWP7 306 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 NELL1Q92832 810 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 C8orf48Q96LL4 319 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 YIPF3Q9GZM5 350 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 ESF1Q9H501 851 aaKnown RBP4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 AVENQ9NQS1 362 aaPredicted RBP4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 MIS18AQ9NYP9 233 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 PLEKHG2Q9H7P9 1386 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 CPS1P31327 1500 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 BTBD11A6QL63 1104 aa4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 AKR1B15C9JRZ8 316 aaPredicted RBP4.29□□□□□ -1.72
R3HDM1-220ENST00000628915 CHUKO15111 745 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms