RNA–Protein interactions for RNA: ENST00000627809.1

SPTAN1-213, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-213ENST00000627809 UBXN2AP68543 259 aa9.53□□□□□ -0.88
SPTAN1-213ENST00000627809 CCDC96Q2M329 555 aa9.53□□□□□ -0.88
SPTAN1-213ENST00000627809 SLC30A10Q6XR72 485 aa9.53□□□□□ -0.88
SPTAN1-213ENST00000627809 SOCS4Q8WXH5 440 aa9.53□□□□□ -0.88
SPTAN1-213ENST00000627809 TCEANC2Q96MN5 208 aa9.53□□□□□ -0.88
SPTAN1-213ENST00000627809 MMP19Q99542 508 aa9.53□□□□□ -0.88
SPTAN1-213ENST00000627809 MYL10Q9BUA6 226 aa9.53□□□□□ -0.88
SPTAN1-213ENST00000627809 DSCC1Q9BVC3 393 aa9.53□□□□□ -0.88
SPTAN1-213ENST00000627809 LRRC2Q9BYS8 371 aa9.53□□□□□ -0.88
SPTAN1-213ENST00000627809 HOXC10Q9NYD6 342 aa9.53□□□□□ -0.88
SPTAN1-213ENST00000627809 ZMYND8Q9ULU4 1186 aaPredicted RBP9.53□□□□□ -0.88
SPTAN1-213ENST00000627809 COLQQ9Y215 455 aaPredicted RBP9.53□□□□□ -0.88
SPTAN1-213ENST00000627809 SOX1O00570 391 aaPredicted RBP9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 OPLAHO14841 1288 aa9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 CTAGE5O15320 804 aa9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 EIF5BO60841 1220 aaKnown RBP9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 DTNBO60941 627 aa9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 PGK1P00558 417 aa9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 SNHG28P0DPA3 235 aa9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 CPA1P15085 419 aa9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 SLC1A4P43007 532 aa9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 ZNF543Q08ER8 600 aa9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 ARHGEF6Q15052 776 aa9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 PRPF38BQ5VTL8 546 aaKnown RBP9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 OLFML2BQ68BL8 750 aa9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 MFSD6Q6ZSS7 791 aa9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 GTF3C2Q8WUA4 911 aaPredicted RBP9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 CLEC4DQ8WXI8 215 aa9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 GMCL1Q96IK5 515 aa9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 ESYT1Q9BSJ8 1104 aa9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 CDH23Q9H251 3354 aa9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 PRO3102Q9H379 93 aa9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 SH2D4AQ9H788 454 aa9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 HMX1Q9NP08 348 aaPredicted RBP9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 A1CFQ9NQ94 594 aaKnown RBP9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 PDGFCQ9NRA1 345 aa9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 COL20A1Q9P218 1284 aa9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 RBM8AQ9Y5S9 174 aaKnown RBP9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 PTPRSQ13332 1948 aa9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 TNKSO95271 1327 aa9.52□□□□□ -0.89
SPTAN1-213ENST00000627809 E7EWF7 191 aa9.51□□□□□ -0.89
SPTAN1-213ENST00000627809 ALAS1P13196 640 aa9.51□□□□□ -0.89
SPTAN1-213ENST00000627809 CNGA1P29973 690 aa9.51□□□□□ -0.89
SPTAN1-213ENST00000627809 ATN1P54259 1190 aaPredicted RBP9.51□□□□□ -0.89
SPTAN1-213ENST00000627809 CCNA1P78396 465 aa9.51□□□□□ -0.89
SPTAN1-213ENST00000627809 KIAA1211Q6ZU35 1233 aa9.51□□□□□ -0.89
SPTAN1-213ENST00000627809 DPP9Q86TI2 863 aa9.51□□□□□ -0.89
SPTAN1-213ENST00000627809 MB21D2Q8IYB1 491 aaPredicted RBP9.51□□□□□ -0.89
SPTAN1-213ENST00000627809 C7orf61Q8IZ16 206 aa9.51□□□□□ -0.89
SPTAN1-213ENST00000627809 RASEFQ8IZ41 740 aa9.51□□□□□ -0.89
SPTAN1-213ENST00000627809 MB21D1Q8N884 522 aa9.51□□□□□ -0.89
SPTAN1-213ENST00000627809 FAM133AQ8N9E0 248 aa9.51□□□□□ -0.89
SPTAN1-213ENST00000627809 PRPF38AQ8NAV1 312 aaKnown RBP9.51□□□□□ -0.89
SPTAN1-213ENST00000627809 ZFP91Q96JP5 570 aaPredicted RBP9.51□□□□□ -0.89
SPTAN1-213ENST00000627809 TEX13BQ9BXU2 312 aa9.51□□□□□ -0.89
SPTAN1-213ENST00000627809 RANBP17Q9H2T7 1088 aaKnown RBP9.51□□□□□ -0.89
SPTAN1-213ENST00000627809 MROH8Q9H579 483 aa9.51□□□□□ -0.89
SPTAN1-213ENST00000627809 RNF146Q9NTX7 359 aa9.51□□□□□ -0.89
SPTAN1-213ENST00000627809 TCP11L1Q9NUJ3 509 aa9.51□□□□□ -0.89
SPTAN1-213ENST00000627809 DDX20Q9UHI6 824 aaKnown RBP9.51□□□□□ -0.89
SPTAN1-213ENST00000627809 IVNS1ABPQ9Y6Y0 642 aa9.51□□□□□ -0.89
SPTAN1-213ENST00000627809 EYSQ5T1H1 3165 aa9.51□□□□□ -0.89
SPTAN1-213ENST00000627809 ZNF213O14771 459 aa9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 ATP2A1O14983 1001 aa9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 ADAMTS3O15072 1205 aa9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 CYTH3O43739 400 aa9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 TOP1P11387 765 aaKnown RBP9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 FCER1AP12319 257 aa9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 RXRAP19793 462 aa9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 ITGB8P26012 769 aa9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 STAT2P52630 851 aa9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 ADCK5Q3MIX3 580 aa9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 SYDE2Q5VT97 1194 aa9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 MAMDC4Q6UXC1 1216 aa9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 BTNL9Q6UXG8 535 aa9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 CHRDL2Q6WN34 429 aa9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 SH3RF1Q7Z6J0 888 aa9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 CCAR1Q8IX12 1150 aaKnown RBP9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 PNMA1Q8ND90 353 aa9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 FERMT2Q96AC1 680 aa9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 ZSCAN10Q96SZ4 725 aaPredicted RBP9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 TINF2Q9BSI4 451 aa9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 CWC22Q9HCG8 908 aaKnown RBP9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 RBM27Q9P2N5 1060 aaKnown RBP9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 CTNNA3Q9UI47 895 aa9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 FEM1BQ9UK73 627 aa9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 TELO2Q9Y4R8 837 aa9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 TET1Q8NFU7 2136 aa9.5□□□□□ -0.89
SPTAN1-213ENST00000627809 WDR81Q562E7 1941 aa9.49□□□□□ -0.89
SPTAN1-213ENST00000627809 SLC27A2O14975 620 aa9.49□□□□□ -0.89
SPTAN1-213ENST00000627809 SLC3A2P08195 630 aaKnown RBP9.49□□□□□ -0.89
SPTAN1-213ENST00000627809 IKQ13123 557 aaPredicted RBP9.49□□□□□ -0.89
SPTAN1-213ENST00000627809 LRRC41Q15345 812 aa9.49□□□□□ -0.89
SPTAN1-213ENST00000627809 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.49□□□□□ -0.89
SPTAN1-213ENST00000627809 ARMCX2Q7L311 632 aa9.49□□□□□ -0.89
SPTAN1-213ENST00000627809 EEPD1Q7L9B9 569 aa9.49□□□□□ -0.89
SPTAN1-213ENST00000627809 FBXO16Q8IX29 292 aaPredicted RBP9.49□□□□□ -0.89
SPTAN1-213ENST00000627809 CCDC144CPQ8IYA2 1237 aa9.49□□□□□ -0.89
SPTAN1-213ENST00000627809 CMTR1Q8N1G2 835 aaKnown RBP9.49□□□□□ -0.89
SPTAN1-213ENST00000627809 DCAF4Q8WV16 495 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms