RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 PLCD1P51178 756 aa13.92□□□□□ -0.18
LITAF-221ENST00000622633 STX17P56962 302 aa13.92□□□□□ -0.18
LITAF-221ENST00000622633 ACTN3Q08043 901 aaPredicted RBP13.92□□□□□ -0.18
LITAF-221ENST00000622633 KCNB1Q14721 858 aa13.92□□□□□ -0.18
LITAF-221ENST00000622633 NR1I3Q14994 352 aa13.92□□□□□ -0.18
LITAF-221ENST00000622633 NAA25Q14CX7 972 aa13.92□□□□□ -0.18
LITAF-221ENST00000622633 TRIML1Q8N9V2 468 aa13.92□□□□□ -0.18
LITAF-221ENST00000622633 SPDL1Q96EA4 605 aa13.92□□□□□ -0.18
LITAF-221ENST00000622633 ACSBG1Q96GR2 724 aa13.92□□□□□ -0.18
LITAF-221ENST00000622633 WDR24Q96S15 920 aa13.92□□□□□ -0.18
LITAF-221ENST00000622633 ZSCAN10Q96SZ4 725 aaPredicted RBP13.92□□□□□ -0.18
LITAF-221ENST00000622633 SLX1AQ9BQ83 275 aa13.92□□□□□ -0.18
LITAF-221ENST00000622633 TMX4Q9H1E5 349 aaPredicted RBP13.92□□□□□ -0.18
LITAF-221ENST00000622633 G3BP2Q9UN86 482 aaKnown RBP13.92□□□□□ -0.18
LITAF-221ENST00000622633 FSBPO95073 299 aa13.91□□□□□ -0.18
LITAF-221ENST00000622633 NTSR2O95665 410 aa13.91□□□□□ -0.18
LITAF-221ENST00000622633 IMPDH2P12268 514 aa13.91□□□□□ -0.18
LITAF-221ENST00000622633 TXLNAP40222 546 aa13.91□□□□□ -0.18
LITAF-221ENST00000622633 RCAN1P53805 252 aa13.91□□□□□ -0.18
LITAF-221ENST00000622633 SPATA20Q8TB22 786 aa13.91□□□□□ -0.18
LITAF-221ENST00000622633 TBC1D5Q92609 795 aa13.91□□□□□ -0.18
LITAF-221ENST00000622633 DESI2Q9BSY9 194 aa13.91□□□□□ -0.18
LITAF-221ENST00000622633 SUGCTQ9HAC7 445 aa13.91□□□□□ -0.18
LITAF-221ENST00000622633 TIAM2Q8IVF5 1701 aa13.91□□□□□ -0.18
LITAF-221ENST00000622633 TEX33O43247 280 aa13.91□□□□□ -0.18
LITAF-221ENST00000622633 STX10O60499 249 aa13.91□□□□□ -0.18
LITAF-221ENST00000622633 SETSIPP0DME0 302 aa13.91□□□□□ -0.18
LITAF-221ENST00000622633 CD44P16070 742 aaKnown RBP13.91□□□□□ -0.18
LITAF-221ENST00000622633 KRT2P35908 639 aa13.91□□□□□ -0.18
LITAF-221ENST00000622633 FUT2Q10981 343 aa13.91□□□□□ -0.18
LITAF-221ENST00000622633 ZNF174Q15697 407 aa13.91□□□□□ -0.18
LITAF-221ENST00000622633 PARP10Q53GL7 1025 aa13.91□□□□□ -0.18
LITAF-221ENST00000622633 AATFQ9NY61 560 aaKnown RBP eCLIP13.91□□□□□ -0.18
LITAF-221ENST00000622633 RTL9Q8NET4 1388 aa13.91□□□□□ -0.18
LITAF-221ENST00000622633 XBP1P17861 261 aa13.9□□□□□ -0.18
LITAF-221ENST00000622633 IFIT1BQ5T764 474 aaKnown RBP13.9□□□□□ -0.18
LITAF-221ENST00000622633 CATIPQ7Z7H3 387 aa13.9□□□□□ -0.18
LITAF-221ENST00000622633 MAB21L3Q8N8X9 362 aa13.9□□□□□ -0.18
LITAF-221ENST00000622633 SYMPKQ92797 1274 aaKnown RBP13.9□□□□□ -0.18
LITAF-221ENST00000622633 PAGE5Q96GU1 130 aa13.9□□□□□ -0.18
LITAF-221ENST00000622633 PHF20Q9BVI0 1012 aa13.9□□□□□ -0.18
LITAF-221ENST00000622633 BIN2Q9UBW5 565 aaPredicted RBP13.9□□□□□ -0.18
LITAF-221ENST00000622633 CHD4Q14839 1912 aa13.9□□□□□ -0.18
LITAF-221ENST00000622633 RTN3O95197 1032 aaPredicted RBP13.9□□□□□ -0.18
LITAF-221ENST00000622633 ERCC5P28715 1186 aaPredicted RBP13.9□□□□□ -0.18
LITAF-221ENST00000622633 PPP2R3AQ06190 1150 aa13.9□□□□□ -0.18
LITAF-221ENST00000622633 ITPK1Q13572 414 aa13.9□□□□□ -0.18
LITAF-221ENST00000622633 MTF1Q14872 753 aa13.9□□□□□ -0.18
LITAF-221ENST00000622633 RCSD1Q6JBY9 416 aa13.9□□□□□ -0.18
LITAF-221ENST00000622633 SMYD4Q8IYR2 804 aaPredicted RBP13.9□□□□□ -0.18
LITAF-221ENST00000622633 OR8K1Q8NGG5 319 aa13.9□□□□□ -0.18
LITAF-221ENST00000622633 CCDC102AQ96A19 550 aa13.9□□□□□ -0.18
LITAF-221ENST00000622633 RIOK1Q9BRS2 568 aaKnown RBP13.9□□□□□ -0.18
LITAF-221ENST00000622633 KLC4Q9NSK0 619 aa13.9□□□□□ -0.18
LITAF-221ENST00000622633 ARAP2Q8WZ64 1704 aa13.9□□□□□ -0.18
LITAF-221ENST00000622633 DOCK2Q92608 1830 aa13.9□□□□□ -0.18
LITAF-221ENST00000622633 A0A1B0GTH6 734 aa13.89□□□□□ -0.19
LITAF-221ENST00000622633 ZSCAN9O15535 394 aaPredicted RBP13.89□□□□□ -0.19
LITAF-221ENST00000622633 PRPF3O43395 683 aaKnown RBP13.89□□□□□ -0.19
LITAF-221ENST00000622633 OATP04181 439 aa13.89□□□□□ -0.19
LITAF-221ENST00000622633 USP5P45974 858 aa13.89□□□□□ -0.19
LITAF-221ENST00000622633 SLC8A3P57103 927 aa13.89□□□□□ -0.19
LITAF-221ENST00000622633 USP4Q13107 963 aa13.89□□□□□ -0.19
LITAF-221ENST00000622633 KARSQ15046 597 aaKnown RBP13.89□□□□□ -0.19
LITAF-221ENST00000622633 HSP90B2PQ58FF3 399 aa13.89□□□□□ -0.19
LITAF-221ENST00000622633 THEMIS2Q5TEJ8 643 aa13.89□□□□□ -0.19
LITAF-221ENST00000622633 AFAP1L1Q8TED9 768 aa13.89□□□□□ -0.19
LITAF-221ENST00000622633 LMBR1Q8WVP7 490 aa13.89□□□□□ -0.19
LITAF-221ENST00000622633 STAMQ92783 540 aa13.89□□□□□ -0.19
LITAF-221ENST00000622633 PLEKHG4BQ96PX9 1271 aa13.89□□□□□ -0.19
LITAF-221ENST00000622633 HOMER3Q9NSC5 361 aa13.89□□□□□ -0.19
LITAF-221ENST00000622633 SHOX2O60902 331 aaPredicted RBP13.89□□□□□ -0.19
LITAF-221ENST00000622633 COBLO75128 1261 aa13.89□□□□□ -0.19
LITAF-221ENST00000622633 EVX2Q03828 476 aa13.89□□□□□ -0.19
LITAF-221ENST00000622633 PPP2R5BQ15173 497 aa13.89□□□□□ -0.19
LITAF-221ENST00000622633 SPATA1Q5VX52 437 aa13.89□□□□□ -0.19
LITAF-221ENST00000622633 C3orf67Q6ZVT6 689 aa13.89□□□□□ -0.19
LITAF-221ENST00000622633 SH3RF1Q7Z6J0 888 aa13.89□□□□□ -0.19
LITAF-221ENST00000622633 MYLK4Q86YV6 388 aaPredicted RBP13.89□□□□□ -0.19
LITAF-221ENST00000622633 RBM12BQ8IXT5 1001 aaKnown RBP13.89□□□□□ -0.19
LITAF-221ENST00000622633 CPLX3Q8WVH0 158 aa13.89□□□□□ -0.19
LITAF-221ENST00000622633 EZH1Q92800 747 aaPredicted RBP13.89□□□□□ -0.19
LITAF-221ENST00000622633 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.89□□□□□ -0.19
LITAF-221ENST00000622633 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.89□□□□□ -0.19
LITAF-221ENST00000622633 LOC102724428A0A0B4J2F2 783 aa13.88□□□□□ -0.19
LITAF-221ENST00000622633 AKR1B15C9JRZ8 316 aaPredicted RBP13.88□□□□□ -0.19
LITAF-221ENST00000622633 SIK1P57059 783 aa13.88□□□□□ -0.19
LITAF-221ENST00000622633 APTXQ7Z2E3 356 aaKnown RBP13.88□□□□□ -0.19
LITAF-221ENST00000622633 CEP112Q8N8E3 955 aa13.88□□□□□ -0.19
LITAF-221ENST00000622633 RMI1Q9H9A7 625 aa13.88□□□□□ -0.19
LITAF-221ENST00000622633 GOLGA6L9A6NEM1 432 aa13.88□□□□□ -0.19
LITAF-221ENST00000622633 SOWAHDA6NJG2 315 aa13.88□□□□□ -0.19
LITAF-221ENST00000622633 PRPF6O94906 941 aaKnown RBP13.88□□□□□ -0.19
LITAF-221ENST00000622633 RBL2Q08999 1139 aa13.88□□□□□ -0.19
LITAF-221ENST00000622633 TROAPQ12815 778 aa13.88□□□□□ -0.19
LITAF-221ENST00000622633 ZNF384Q8TF68 577 aa13.88□□□□□ -0.19
LITAF-221ENST00000622633 GOLGA1Q92805 767 aa13.88□□□□□ -0.19
LITAF-221ENST00000622633 CDC5LQ99459 802 aaKnown RBP13.88□□□□□ -0.19
LITAF-221ENST00000622633 MRPL44Q9H9J2 332 aaKnown RBP13.88□□□□□ -0.19
LITAF-221ENST00000622633 MRFAP1Q9Y605 127 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms