RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 C3orf67Q6ZVT6 689 aa3.39□□□□□ -1.87
NEB-220ENST00000618972 TTLL11Q8NHH1 800 aa3.39□□□□□ -1.87
NEB-220ENST00000618972 TSC22D3Q99576 134 aa3.39□□□□□ -1.87
NEB-220ENST00000618972 MAK16Q9BXY0 300 aaKnown RBP3.39□□□□□ -1.87
NEB-220ENST00000618972 PPP1R3GB7ZBB8 358 aa3.39□□□□□ -1.87
NEB-220ENST00000618972 TEDDM1Q5T9Z0 273 aa3.39□□□□□ -1.87
NEB-220ENST00000618972 MICU3Q86XE3 530 aa3.39□□□□□ -1.87
NEB-220ENST00000618972 SPZ1Q9BXG8 430 aa3.39□□□□□ -1.87
NEB-220ENST00000618972 ARHGAP6O43182 974 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 POLD1P28340 1107 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 EAPPQ56P03 285 aaPredicted RBP3.38□□□□□ -1.87
NEB-220ENST00000618972 ZMYM1Q5SVZ6 1142 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 FAM182BQ5T319 152 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 SSX2IPQ9Y2D8 614 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 OCA2Q04671 838 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 HLTFQ14527 1009 aaKnown RBP eCLIP3.38□□□□□ -1.87
NEB-220ENST00000618972 PPP4R3AQ6IN85 833 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 TRIM63Q969Q1 353 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 CNNM1Q9NRU3 951 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 PODXLO00592 558 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 TBC1D8O95759 1140 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 MAGEA8P43361 318 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 NUTM2BA6NNL0 878 aaPredicted RBP3.38□□□□□ -1.87
NEB-220ENST00000618972 NUTM2EB1AL46 878 aaPredicted RBP3.38□□□□□ -1.87
NEB-220ENST00000618972 NYAP1Q6ZVC0 841 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 TBC1D10CQ8IV04 446 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 CCDC113Q9H0I3 377 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 VPS54Q9P1Q0 977 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 GGT7Q9UJ14 662 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 NKTRP30414 1462 aaKnown RBP3.38□□□□□ -1.87
NEB-220ENST00000618972 ICA1Q05084 483 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 SPTY2D1Q68D10 685 aaPredicted RBP3.38□□□□□ -1.87
NEB-220ENST00000618972 SND1Q7KZF4 910 aaKnown RBP eCLIP3.38□□□□□ -1.87
NEB-220ENST00000618972 ADAT2Q7Z6V5 191 aaKnown RBP3.38□□□□□ -1.87
NEB-220ENST00000618972 SYCE1Q8N0S2 351 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 OR2W6PQ8NHA6 318 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 STRBPQ96SI9 672 aaKnown RBP3.38□□□□□ -1.87
NEB-220ENST00000618972 PSMA4P25789 261 aaKnown RBP3.38□□□□□ -1.87
NEB-220ENST00000618972 SMTNP53814 917 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 CYLC2Q14093 348 aaPredicted RBP3.38□□□□□ -1.87
NEB-220ENST00000618972 FBXW10Q5XX13 1052 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 HEATR3Q7Z4Q2 680 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 CNBD1Q8NA66 436 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 VIPAS39Q9H9C1 493 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 REXO2Q9Y3B8 237 aaKnown RBP3.38□□□□□ -1.87
NEB-220ENST00000618972 CYP27B1O15528 508 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 CCT5P48643 541 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 DDX42Q86XP3 938 aaKnown RBP eCLIP3.38□□□□□ -1.87
NEB-220ENST00000618972 FAM186BQ8IYM0 893 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 FAM84AQ96KN4 292 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 TCEAL9Q9UHQ7 104 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 TLDC2A0PJX2 215 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 ADCY3O60266 1144 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 METTL24Q5JXM2 366 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 PNMA8AQ86V59 439 aaPredicted RBP3.38□□□□□ -1.87
NEB-220ENST00000618972 IQUBQ8NA54 791 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 METP08581 1390 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 GMNCA6NCL1 334 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 RSPH10B2B2RC85 870 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 RSPH10BP0C881 870 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 CYP7A1P22680 504 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 CYP2C19P33261 490 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 RASGRF1Q13972 1273 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 SHISA4Q96DD7 197 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.38□□□□□ -1.87
NEB-220ENST00000618972 CCNI2Q6ZMN8 369 aaPredicted RBP3.38□□□□□ -1.87
NEB-220ENST00000618972 BCAS4Q8TDM0 211 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 ITFG2Q969R8 447 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 MMS19Q96T76 1030 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 RPRD2Q5VT52 1461 aaKnown RBP3.38□□□□□ -1.87
NEB-220ENST00000618972 SYF2O95926 243 aaKnown RBP3.38□□□□□ -1.87
NEB-220ENST00000618972 ADAM33Q9BZ11 813 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 FGD5Q6ZNL6 1462 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 CFAP73A6NFT4 308 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 NKX1-1Q15270 411 aaPredicted RBP3.38□□□□□ -1.87
NEB-220ENST00000618972 MAGEB6Q8N7X4 407 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 TMEM87AQ8NBN3 555 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 LINS1Q8NG48 757 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 VWA3AA6NCI4 1184 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 TADA3O75528 432 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 CDC25CP30307 473 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 SERPINB4P48594 390 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 KIFAP3Q92845 792 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 ATP6V0A1Q93050 837 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 CAPS2Q9BXY5 557 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 FUT8Q9BYC5 575 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 RPAP1Q9BWH6 1393 aaPredicted RBP3.38□□□□□ -1.87
NEB-220ENST00000618972 SUN1O94901 812 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 CCND1P24385 295 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 PHBP35232 272 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 GIMAP4Q9NUV9 329 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 FANCD2Q9BXW9 1451 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 PCYT1AP49585 367 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 ADGRG1Q9Y653 693 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 OSBPL9Q96SU4 736 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 PARVBQ9HBI1 364 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 DIABLOQ9NR28 239 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 AGPAT5Q9NUQ2 364 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 RP1P56715 2156 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 GYG1P46976 350 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms