RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 ATN1P54259 1190 aaPredicted RBP11.41□□□□□ -0.58
TARDBP-218ENST00000617172 CCDC178Q5BJE1 867 aa11.41□□□□□ -0.58
TARDBP-218ENST00000617172 RRP12Q5JTH9 1297 aaKnown RBP11.41□□□□□ -0.58
TARDBP-218ENST00000617172 GPR153Q6NV75 609 aa11.41□□□□□ -0.58
TARDBP-218ENST00000617172 KCTD1Q719H9 257 aa11.41□□□□□ -0.58
TARDBP-218ENST00000617172 ZNF589Q86UQ0 364 aaPredicted RBP11.41□□□□□ -0.58
TARDBP-218ENST00000617172 TDHQ8IZJ6 230 aa11.41□□□□□ -0.58
TARDBP-218ENST00000617172 TSEN34Q9BSV6 310 aaKnown RBP11.41□□□□□ -0.58
TARDBP-218ENST00000617172 UBE2OQ9C0C9 1292 aaKnown RBP11.41□□□□□ -0.58
TARDBP-218ENST00000617172 DIAPH3Q9NSV4 1193 aa11.41□□□□□ -0.58
TARDBP-218ENST00000617172 PHF24Q9UPV7 400 aa11.41□□□□□ -0.58
TARDBP-218ENST00000617172 SUPT16HQ9Y5B9 1047 aaKnown RBP11.41□□□□□ -0.58
TARDBP-218ENST00000617172 TRIOBPQ9H2D6 2365 aa11.41□□□□□ -0.58
TARDBP-218ENST00000617172 ASB14A6NK59 587 aa11.4□□□□□ -0.58
TARDBP-218ENST00000617172 POTEB2H3BUK9 544 aa11.4□□□□□ -0.58
TARDBP-218ENST00000617172 DUSP11O75319 330 aaKnown RBP11.4□□□□□ -0.58
TARDBP-218ENST00000617172 SNAI1O95863 264 aaPredicted RBP11.4□□□□□ -0.58
TARDBP-218ENST00000617172 TAL1P17542 331 aaPredicted RBP11.4□□□□□ -0.58
TARDBP-218ENST00000617172 RTP1P59025 263 aa11.4□□□□□ -0.58
TARDBP-218ENST00000617172 ACVR2BQ13705 512 aa11.4□□□□□ -0.58
TARDBP-218ENST00000617172 SNX17Q15036 470 aa11.4□□□□□ -0.58
TARDBP-218ENST00000617172 LRIT3Q3SXY7 679 aa11.4□□□□□ -0.58
TARDBP-218ENST00000617172 CWC27Q6UX04 472 aaKnown RBP11.4□□□□□ -0.58
TARDBP-218ENST00000617172 BTNL9Q6UXG8 535 aa11.4□□□□□ -0.58
TARDBP-218ENST00000617172 ESR2Q92731 530 aa11.4□□□□□ -0.58
TARDBP-218ENST00000617172 AGBL1Q96MI9 1066 aa11.4□□□□□ -0.58
TARDBP-218ENST00000617172 TRERF1Q96PN7 1200 aa11.4□□□□□ -0.58
TARDBP-218ENST00000617172 SPC25Q9HBM1 224 aa11.4□□□□□ -0.58
TARDBP-218ENST00000617172 HOMER2Q9NSB8 354 aa11.4□□□□□ -0.58
TARDBP-218ENST00000617172 RNF146Q9NTX7 359 aa11.4□□□□□ -0.58
TARDBP-218ENST00000617172 CTNNA3Q9UI47 895 aa11.4□□□□□ -0.58
TARDBP-218ENST00000617172 PRR12Q9ULL5 1215 aa11.4□□□□□ -0.58
TARDBP-218ENST00000617172 TACC3Q9Y6A5 838 aa11.4□□□□□ -0.58
TARDBP-218ENST00000617172 ZNF536O15090 1300 aa11.39□□□□□ -0.59
TARDBP-218ENST00000617172 MOXD2PA6NHM9 499 aa11.39□□□□□ -0.59
TARDBP-218ENST00000617172 PGK1P00558 417 aa11.39□□□□□ -0.59
TARDBP-218ENST00000617172 ICAM1P05362 532 aa11.39□□□□□ -0.59
TARDBP-218ENST00000617172 ALAS1P13196 640 aa11.39□□□□□ -0.59
TARDBP-218ENST00000617172 HAND2P61296 217 aa11.39□□□□□ -0.59
TARDBP-218ENST00000617172 CCDC96Q2M329 555 aa11.39□□□□□ -0.59
TARDBP-218ENST00000617172 IQCA1Q86XH1 822 aa11.39□□□□□ -0.59
TARDBP-218ENST00000617172 DGKHQ86XP1 1220 aa11.39□□□□□ -0.59
TARDBP-218ENST00000617172 NUP133Q8WUM0 1156 aa11.39□□□□□ -0.59
TARDBP-218ENST00000617172 TMEM47Q9BQJ4 181 aa11.39□□□□□ -0.59
TARDBP-218ENST00000617172 DSCC1Q9BVC3 393 aa11.39□□□□□ -0.59
TARDBP-218ENST00000617172 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.39□□□□□ -0.59
TARDBP-218ENST00000617172 ATP11BQ9Y2G3 1177 aa11.39□□□□□ -0.59
TARDBP-218ENST00000617172 DNAH12Q6ZR08 3092 aa11.38□□□□□ -0.59
TARDBP-218ENST00000617172 MDM2Q00987 491 aaPredicted RBP11.38□□□□□ -0.59
TARDBP-218ENST00000617172 SYDE2Q5VT97 1194 aa11.38□□□□□ -0.59
TARDBP-218ENST00000617172 CCDC174Q6PII3 467 aa11.38□□□□□ -0.59
TARDBP-218ENST00000617172 ARMCX2Q7L311 632 aa11.38□□□□□ -0.59
TARDBP-218ENST00000617172 CCDC144CPQ8IYA2 1237 aa11.38□□□□□ -0.59
TARDBP-218ENST00000617172 FAM133AQ8N9E0 248 aa11.38□□□□□ -0.59
TARDBP-218ENST00000617172 PCSK9Q8NBP7 692 aaKnown RBP11.38□□□□□ -0.59
TARDBP-218ENST00000617172 FERMT2Q96AC1 680 aa11.38□□□□□ -0.59
TARDBP-218ENST00000617172 RANBP17Q9H2T7 1088 aaKnown RBP11.38□□□□□ -0.59
TARDBP-218ENST00000617172 A1CFQ9NQ94 594 aaKnown RBP11.38□□□□□ -0.59
TARDBP-218ENST00000617172 ZHX1Q9UKY1 873 aaPredicted RBP11.38□□□□□ -0.59
TARDBP-218ENST00000617172 CCPG1Q9ULG6 757 aa11.38□□□□□ -0.59
TARDBP-218ENST00000617172 MTMR7Q9Y216 660 aa11.38□□□□□ -0.59
TARDBP-218ENST00000617172 LOC102724159A0A0B4J2E5 919 aa11.37□□□□□ -0.59
TARDBP-218ENST00000617172 ADAMTS4O75173 837 aa11.37□□□□□ -0.59
TARDBP-218ENST00000617172 PDHBP11177 359 aa11.37□□□□□ -0.59
TARDBP-218ENST00000617172 CST5P28325 142 aaPredicted RBP11.37□□□□□ -0.59
TARDBP-218ENST00000617172 CNTN2Q02246 1040 aa11.37□□□□□ -0.59
TARDBP-218ENST00000617172 PWP2Q15269 919 aaKnown RBP11.37□□□□□ -0.59
TARDBP-218ENST00000617172 IMMTQ16891 758 aaKnown RBP11.37□□□□□ -0.59
TARDBP-218ENST00000617172 CCDC144BQ3MJ40 725 aa11.37□□□□□ -0.59
TARDBP-218ENST00000617172 TRIM60Q495X7 471 aa11.37□□□□□ -0.59
TARDBP-218ENST00000617172 GPATCH4Q5T3I0 446 aaKnown RBP11.37□□□□□ -0.59
TARDBP-218ENST00000617172 TBC1D10CQ8IV04 446 aa11.37□□□□□ -0.59
TARDBP-218ENST00000617172 KLHDC9Q8NEP7 349 aa11.37□□□□□ -0.59
TARDBP-218ENST00000617172 CHMP4CQ96CF2 233 aa11.37□□□□□ -0.59
TARDBP-218ENST00000617172 FGD4Q96M96 766 aa11.37□□□□□ -0.59
TARDBP-218ENST00000617172 TOX2Q96NM4 488 aa11.37□□□□□ -0.59
TARDBP-218ENST00000617172 CNNM2Q9H8M5 875 aa11.37□□□□□ -0.59
TARDBP-218ENST00000617172 ADD3Q9UEY8 706 aaKnown RBP11.37□□□□□ -0.59
TARDBP-218ENST00000617172 PARP14Q460N5 1801 aa11.37□□□□□ -0.59
TARDBP-218ENST00000617172 LAMA3Q16787 3333 aa11.37□□□□□ -0.59
TARDBP-218ENST00000617172 ELP1O95163 1332 aa11.36□□□□□ -0.59
TARDBP-218ENST00000617172 SYNRGQ9UMZ2 1314 aa11.36□□□□□ -0.59
TARDBP-218ENST00000617172 A0A1W2PQ45 241 aaPredicted RBP11.36□□□□□ -0.59
TARDBP-218ENST00000617172 A0A1W2PQY0 241 aa11.36□□□□□ -0.59
TARDBP-218ENST00000617172 SOX1O00570 391 aaPredicted RBP11.36□□□□□ -0.59
TARDBP-218ENST00000617172 SNHG28P0DPA3 235 aa11.36□□□□□ -0.59
TARDBP-218ENST00000617172 SLC16A2P36021 539 aa11.36□□□□□ -0.59
TARDBP-218ENST00000617172 ACLYP53396 1101 aa11.36□□□□□ -0.59
TARDBP-218ENST00000617172 GJA9P57773 515 aa11.36□□□□□ -0.59
TARDBP-218ENST00000617172 NKX3-2P78367 333 aa11.36□□□□□ -0.59
TARDBP-218ENST00000617172 TLE2Q04725 743 aa11.36□□□□□ -0.59
TARDBP-218ENST00000617172 ZNF543Q08ER8 600 aa11.36□□□□□ -0.59
TARDBP-218ENST00000617172 KCNA10Q16322 511 aa11.36□□□□□ -0.59
TARDBP-218ENST00000617172 IQSEC1Q6DN90 963 aa11.36□□□□□ -0.59
TARDBP-218ENST00000617172 CCSAPQ6IQ19 270 aaPredicted RBP11.36□□□□□ -0.59
TARDBP-218ENST00000617172 TTBK2Q6IQ55 1244 aa11.36□□□□□ -0.59
TARDBP-218ENST00000617172 ANKRD33Q7Z3H0 272 aa11.36□□□□□ -0.59
TARDBP-218ENST00000617172 RUFY2Q8WXA3 655 aa11.36□□□□□ -0.59
TARDBP-218ENST00000617172 ANKS1AQ92625 1134 aa11.36□□□□□ -0.59
TARDBP-218ENST00000617172 GLT1D1Q96MS3 346 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms