RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 SH2B2O14492 632 aaPredicted RBP13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 KRT19P08727 400 aa13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 IRX5P78411 483 aaPredicted RBP13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 ABCB5Q2M3G0 1257 aa13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 FAM178BQ8IXR5 827 aa13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 PANK4Q9NVE7 773 aa13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 ERCC6L2Q5T890 1561 aa13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 CLRN2A0PK11 232 aa13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 PPP6R2O75170 966 aa13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 POLR2MP0CAP2 368 aa13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 MCAMP43121 646 aa13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 BRINP3Q76B58 766 aa13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 TDRD7Q8NHU6 1098 aaKnown RBP13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 U2AF1L4Q8WU68 220 aaKnown RBP13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 DBNDD1Q9H9R9 158 aa13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 PPM1FP49593 454 aaPredicted RBP13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 PLA2G4DQ86XP0 818 aa13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 ANKRD13CQ8N6S4 541 aa13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 DYNLL2Q96FJ2 89 aa13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 GSDMAQ96QA5 445 aa13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 TRIM6Q9C030 488 aaPredicted RBP13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 GJB4Q9NTQ9 266 aa13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 MRPL11Q9Y3B7 192 aaKnown RBP13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 FAM169AQ9Y6X4 670 aa13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 GNA14O95837 355 aa13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 GPR161Q8N6U8 529 aaKnown RBP13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 AFAP1L1Q8TED9 768 aa13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 GJA10Q969M2 543 aa13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 PAGR1Q9BTK6 254 aa13.81□□□□□ -0.2
TNFAIP3-206ENST00000612899 SORBS3O60504 671 aa13.8□□□□□ -0.2
TNFAIP3-206ENST00000612899 CCDC17Q96LX7 622 aa13.8□□□□□ -0.2
TNFAIP3-206ENST00000612899 LARSQ9P2J5 1176 aaKnown RBP13.8□□□□□ -0.2
TNFAIP3-206ENST00000612899 SERPINB13Q9UIV8 391 aa13.8□□□□□ -0.2
TNFAIP3-206ENST00000612899 KIAA1024Q9UPX6 916 aa13.8□□□□□ -0.2
TNFAIP3-206ENST00000612899 GOLGA6CA6NDK9 693 aa13.8□□□□□ -0.2
TNFAIP3-206ENST00000612899 VIMP08670 466 aaKnown RBP13.8□□□□□ -0.2
TNFAIP3-206ENST00000612899 GOLGA6DP0CG33 693 aa13.8□□□□□ -0.2
TNFAIP3-206ENST00000612899 SLC16A2P36021 539 aa13.8□□□□□ -0.2
TNFAIP3-206ENST00000612899 ADAM9Q13443 819 aa13.8□□□□□ -0.2
TNFAIP3-206ENST00000612899 PPM1EQ8WY54 764 aa13.8□□□□□ -0.2
TNFAIP3-206ENST00000612899 PGBD1Q96JS3 809 aa13.8□□□□□ -0.2
TNFAIP3-206ENST00000612899 GOLGA6AQ9NYA3 693 aa13.8□□□□□ -0.2
TNFAIP3-206ENST00000612899 NKIRAS1Q9NYS0 192 aa13.8□□□□□ -0.2
TNFAIP3-206ENST00000612899 SAMD15Q9P1V8 674 aa13.8□□□□□ -0.2
TNFAIP3-206ENST00000612899 TRPC5Q9UL62 973 aaPredicted RBP13.8□□□□□ -0.2
TNFAIP3-206ENST00000612899 NOD1Q9Y239 953 aa13.8□□□□□ -0.2
TNFAIP3-206ENST00000612899 NDUFAB1O14561 156 aa13.8□□□□□ -0.2
TNFAIP3-206ENST00000612899 XKR9Q5GH70 373 aa13.8□□□□□ -0.2
TNFAIP3-206ENST00000612899 GPATCH4Q5T3I0 446 aaKnown RBP13.8□□□□□ -0.2
TNFAIP3-206ENST00000612899 KCTD1Q719H9 257 aa13.8□□□□□ -0.2
TNFAIP3-206ENST00000612899 AMNQ9BXJ7 453 aa13.8□□□□□ -0.2
TNFAIP3-206ENST00000612899 GOLGA6BA6NDN3 693 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 PABPN1LA6NDY0 278 aaKnown RBP13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 BBOX1O75936 387 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 MMP1P03956 469 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 SLC8A3P57103 927 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 POLR2FP61218 127 aaKnown RBP13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 BRDTQ58F21 947 aaPredicted RBP13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 FAM102BQ5T8I3 360 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 USP17L2Q6R6M4 530 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 SLFN12Q8IYM2 578 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 CSRNP1Q96S65 589 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 SPATA31A3Q5VYP0 1347 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 PPEF1O14829 653 aaPredicted RBP13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 TRAPPC10P48553 1259 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 GOLGA8FQ08AF8 430 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 GOLGA8DPQ0D2H9 430 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 ARHGEF16Q5VV41 709 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 APBB1IPQ7Z5R6 666 aaPredicted RBP13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 CCDC105Q8IYK2 499 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 SMCR8Q8TEV9 937 aaPredicted RBP13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 CCDC127Q96BQ5 260 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 STRBPQ96SI9 672 aaKnown RBP13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 DDX41Q9UJV9 622 aaKnown RBP13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 SSX2IPQ9Y2D8 614 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 ATP10DQ9P241 1426 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 CASP14P31944 242 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 LIFRP42702 1097 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 COPB1P53618 953 aaKnown RBP13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 RESTQ13127 1097 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 PABPC4Q13310 644 aaKnown RBP eCLIP13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 GNPTABQ3T906 1256 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 OTUD6AQ7L8S5 288 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 TRIM58Q8NG06 486 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 KIAA1524Q8TCG1 905 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 FAM204AQ9H8W3 233 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 PCDHA4Q9UN74 947 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 COL4A3BPQ9Y5P4 624 aa13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 EPN1Q9Y6I3 576 aaPredicted RBP13.79□□□□□ -0.2
TNFAIP3-206ENST00000612899 BUB1O43683 1085 aa13.78□□□□□ -0.2
TNFAIP3-206ENST00000612899 UBXN2AP68543 259 aa13.78□□□□□ -0.2
TNFAIP3-206ENST00000612899 PAK2Q13177 524 aa13.78□□□□□ -0.2
TNFAIP3-206ENST00000612899 DEPTORQ8TB45 409 aa13.78□□□□□ -0.2
TNFAIP3-206ENST00000612899 IQCDQ96DY2 449 aa13.78□□□□□ -0.2
TNFAIP3-206ENST00000612899 MCTP2Q6DN12 878 aa13.78□□□□□ -0.2
TNFAIP3-206ENST00000612899 SYCE1Q8N0S2 351 aa13.78□□□□□ -0.2
TNFAIP3-206ENST00000612899 TBCKQ8TEA7 893 aa13.78□□□□□ -0.2
TNFAIP3-206ENST00000612899 CACTINQ8WUQ7 758 aaKnown RBP13.78□□□□□ -0.2
TNFAIP3-206ENST00000612899 COA7Q96BR5 231 aa13.78□□□□□ -0.2
TNFAIP3-206ENST00000612899 PIGSQ96S52 555 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms