RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 GANCQ8TET4 914 aa12.17□□□□□ -0.46
SHANK2-219ENST00000606715 KANSL2Q9H9L4 492 aa12.17□□□□□ -0.46
SHANK2-219ENST00000606715 TNKSO95271 1327 aa12.17□□□□□ -0.46
SHANK2-219ENST00000606715 ZMYM6O95789 1325 aa12.17□□□□□ -0.46
SHANK2-219ENST00000606715 CPA1P15085 419 aa12.17□□□□□ -0.46
SHANK2-219ENST00000606715 TBC1D8BQ0IIM8 1120 aa12.17□□□□□ -0.46
SHANK2-219ENST00000606715 TXNRD1Q16881 649 aa12.17□□□□□ -0.46
SHANK2-219ENST00000606715 TTC30AQ86WT1 665 aa12.17□□□□□ -0.46
SHANK2-219ENST00000606715 RYBPQ8N488 228 aaPredicted RBP12.17□□□□□ -0.46
SHANK2-219ENST00000606715 IFT81Q8WYA0 676 aa12.17□□□□□ -0.46
SHANK2-219ENST00000606715 PARP2Q9UGN5 583 aa12.17□□□□□ -0.46
SHANK2-219ENST00000606715 RABGAP1Q9Y3P9 1069 aa12.17□□□□□ -0.46
SHANK2-219ENST00000606715 OPA1O60313 960 aa12.17□□□□□ -0.46
SHANK2-219ENST00000606715 ARPP19P56211 112 aa12.17□□□□□ -0.46
SHANK2-219ENST00000606715 ZNF449Q6P9G9 518 aa12.17□□□□□ -0.46
SHANK2-219ENST00000606715 IQCDQ96DY2 449 aa12.17□□□□□ -0.46
SHANK2-219ENST00000606715 PSTPIP2Q9H939 334 aa12.17□□□□□ -0.46
SHANK2-219ENST00000606715 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.17□□□□□ -0.46
SHANK2-219ENST00000606715 CDHR2Q9BYE9 1310 aa12.17□□□□□ -0.46
SHANK2-219ENST00000606715 USP17L3A6NCW0 530 aa12.16□□□□□ -0.46
SHANK2-219ENST00000606715 USP17L4A6NCW7 530 aa12.16□□□□□ -0.46
SHANK2-219ENST00000606715 PFDN6O15212 129 aa12.16□□□□□ -0.46
SHANK2-219ENST00000606715 TSTA3Q13630 321 aaPredicted RBP12.16□□□□□ -0.46
SHANK2-219ENST00000606715 ERCC6LQ2NKX8 1250 aa12.16□□□□□ -0.46
SHANK2-219ENST00000606715 USP17L1Q7RTZ2 530 aa12.16□□□□□ -0.46
SHANK2-219ENST00000606715 CCDC26Q8TAB7 109 aa12.16□□□□□ -0.46
SHANK2-219ENST00000606715 NCOA5Q9HCD5 579 aaKnown RBP12.16□□□□□ -0.46
SHANK2-219ENST00000606715 CTTNBP2NLQ9P2B4 639 aa12.16□□□□□ -0.46
SHANK2-219ENST00000606715 FRMPD2Q68DX3 1309 aaPredicted RBP12.16□□□□□ -0.46
SHANK2-219ENST00000606715 FGAP02671 866 aa12.16□□□□□ -0.46
SHANK2-219ENST00000606715 ELF1P32519 619 aa12.16□□□□□ -0.46
SHANK2-219ENST00000606715 MRRFQ96E11 262 aaKnown RBP12.16□□□□□ -0.46
SHANK2-219ENST00000606715 DBNLQ9UJU6 430 aaKnown RBP12.16□□□□□ -0.46
SHANK2-219ENST00000606715 ZNF521Q96K83 1311 aa12.16□□□□□ -0.46
SHANK2-219ENST00000606715 COL15A1P39059 1388 aa12.16□□□□□ -0.46
SHANK2-219ENST00000606715 KLRF2D3W0D1 207 aa12.16□□□□□ -0.46
SHANK2-219ENST00000606715 GRIN3BO60391 1043 aa12.16□□□□□ -0.46
SHANK2-219ENST00000606715 TAOK1Q7L7X3 1001 aa12.16□□□□□ -0.46
SHANK2-219ENST00000606715 BLIDQ8IZY5 108 aa12.16□□□□□ -0.46
SHANK2-219ENST00000606715 SKA2Q8WVK7 121 aaPredicted RBP12.16□□□□□ -0.46
SHANK2-219ENST00000606715 CSRNP1Q96S65 589 aa12.16□□□□□ -0.46
SHANK2-219ENST00000606715 TMEM232C9JQI7 657 aa12.16□□□□□ -0.46
SHANK2-219ENST00000606715 PFKFB2O60825 505 aa12.16□□□□□ -0.46
SHANK2-219ENST00000606715 PTPREP23469 700 aa12.16□□□□□ -0.46
SHANK2-219ENST00000606715 TEKT3Q9BXF9 490 aa12.16□□□□□ -0.46
SHANK2-219ENST00000606715 A0A0D9SFI3 127 aa12.16□□□□□ -0.46
SHANK2-219ENST00000606715 POLR2BP30876 1174 aaKnown RBP12.16□□□□□ -0.46
SHANK2-219ENST00000606715 NELFCDQ8IXH7 590 aa12.16□□□□□ -0.46
SHANK2-219ENST00000606715 CCDC94Q9BW85 323 aaPredicted RBP12.16□□□□□ -0.46
SHANK2-219ENST00000606715 NDUFB9Q9Y6M9 179 aa12.16□□□□□ -0.46
SHANK2-219ENST00000606715 PPRC1Q5VV67 1664 aaKnown RBP12.15□□□□□ -0.46
SHANK2-219ENST00000606715 PRR16Q569H4 304 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 BSPRYQ5W0U4 402 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 SCYL2Q6P3W7 929 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 PDZD4Q76G19 769 aaPredicted RBP12.15□□□□□ -0.46
SHANK2-219ENST00000606715 FOXP4Q8IVH2 680 aaPredicted RBP12.15□□□□□ -0.46
SHANK2-219ENST00000606715 TMEM106CQ9BVX2 250 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 ZSWIM6Q9HCJ5 1215 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 RAD17O75943 681 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 TMEM191BP0C7N4 346 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 HOXD10P28358 340 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 KRT81Q14533 505 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 LRRC47Q8N1G4 583 aaKnown RBP12.15□□□□□ -0.46
SHANK2-219ENST00000606715 CSGALNACT2Q8N6G5 542 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 ANKS4BQ8N8V4 417 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 RDH13Q8NBN7 331 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 PUS3Q9BZE2 481 aaKnown RBP12.15□□□□□ -0.46
SHANK2-219ENST00000606715 DNAI1Q9UI46 699 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 PNMA3Q9UL41 463 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 LRRIQ4A6NIV6 560 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 SCG2P13521 617 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 EXOC8Q8IYI6 725 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 SDR42E1Q8WUS8 393 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 SEC62Q99442 399 aaKnown RBP12.15□□□□□ -0.46
SHANK2-219ENST00000606715 NUP58Q9BVL2 599 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 AMNQ9BXJ7 453 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 CCDC160A6NGH7 325 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 NOL3O60936 208 aaKnown RBP12.15□□□□□ -0.46
SHANK2-219ENST00000606715 SKILP12757 684 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 SEPT14Q6ZU15 432 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 RSRC2Q7L4I2 434 aaKnown RBP12.15□□□□□ -0.46
SHANK2-219ENST00000606715 CABP7Q86V35 215 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 TTLL11Q8NHH1 800 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 SRRTQ9BXP5 876 aaKnown RBP12.15□□□□□ -0.46
SHANK2-219ENST00000606715 PI4KBQ9UBF8 816 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 SERPINB13Q9UIV8 391 aa12.15□□□□□ -0.46
SHANK2-219ENST00000606715 A0A1B0GVL5 298 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 TTLL1O95922 423 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 MNAT1P51948 309 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 SUSD4Q5VX71 490 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 DAAM2Q86T65 1068 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 EPSTI1Q96J88 318 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 DBNDD1Q9H9R9 158 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 SLC8A2Q9UPR5 921 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 PCDHB13Q9Y5F0 798 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 WDR46O15213 610 aaKnown RBP12.14□□□□□ -0.47
SHANK2-219ENST00000606715 ADD2P35612 726 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 ATRIPQ8WXE1 791 aa12.14□□□□□ -0.47
SHANK2-219ENST00000606715 JPH2Q9BR39 696 aaPredicted RBP12.14□□□□□ -0.47
SHANK2-219ENST00000606715 NKIRAS1Q9NYS0 192 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms