RNA–Protein interactions for RNA: ENST00000602632.1

UBE2E3-208, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2 BASIC

Gene UBE2E3, Length 446 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-208ENST00000602632 SEC31BQ9NQW1 1179 aa7.58□□□□□ -1.2
UBE2E3-208ENST00000602632 COL4A1P02462 1669 aa7.57□□□□□ -1.2
UBE2E3-208ENST00000602632 ASTN2O75129 1339 aaPredicted RBP7.57□□□□□ -1.2
UBE2E3-208ENST00000602632 XDHP47989 1333 aa7.57□□□□□ -1.2
UBE2E3-208ENST00000602632 USP17L3A6NCW0 530 aa7.57□□□□□ -1.2
UBE2E3-208ENST00000602632 USP17L4A6NCW7 530 aa7.57□□□□□ -1.2
UBE2E3-208ENST00000602632 UBE2Q2LH0YL09 131 aa7.57□□□□□ -1.2
UBE2E3-208ENST00000602632 TGFBR3LH3BV60 316 aa7.57□□□□□ -1.2
UBE2E3-208ENST00000602632 PDE8AO60658 829 aa7.57□□□□□ -1.2
UBE2E3-208ENST00000602632 WISP1O95388 367 aa7.57□□□□□ -1.2
UBE2E3-208ENST00000602632 TBC1D8O95759 1140 aa7.57□□□□□ -1.2
UBE2E3-208ENST00000602632 WDR43Q15061 677 aaKnown RBP eCLIP7.57□□□□□ -1.2
UBE2E3-208ENST00000602632 USP17L1Q7RTZ2 530 aa7.57□□□□□ -1.2
UBE2E3-208ENST00000602632 CCDC146Q8IYE0 955 aa7.57□□□□□ -1.2
UBE2E3-208ENST00000602632 OGFOD1Q8N543 542 aa7.57□□□□□ -1.2
UBE2E3-208ENST00000602632 CCDC191Q8NCU4 936 aa7.57□□□□□ -1.2
UBE2E3-208ENST00000602632 ZNF296Q8WUU4 475 aaPredicted RBP7.57□□□□□ -1.2
UBE2E3-208ENST00000602632 RUNDC1Q96C34 613 aa7.57□□□□□ -1.2
UBE2E3-208ENST00000602632 MYD88Q99836 296 aa7.57□□□□□ -1.2
UBE2E3-208ENST00000602632 PRM3Q9NNZ6 103 aa7.57□□□□□ -1.2
UBE2E3-208ENST00000602632 ZNF609O15014 1411 aa7.57□□□□□ -1.2
UBE2E3-208ENST00000602632 TNRC18O15417 2968 aaPredicted RBP7.56□□□□□ -1.2
UBE2E3-208ENST00000602632 DDX58O95786 925 aaKnown RBP7.56□□□□□ -1.2
UBE2E3-208ENST00000602632 GHRHP01286 108 aa7.56□□□□□ -1.2
UBE2E3-208ENST00000602632 PCCAP05165 728 aaPredicted RBP7.56□□□□□ -1.2
UBE2E3-208ENST00000602632 TM4SF4P48230 202 aa7.56□□□□□ -1.2
UBE2E3-208ENST00000602632 MMP14P50281 582 aa7.56□□□□□ -1.2
UBE2E3-208ENST00000602632 SREBF2Q12772 1141 aa7.56□□□□□ -1.2
UBE2E3-208ENST00000602632 DUSP27Q5VZP5 1158 aa7.56□□□□□ -1.2
UBE2E3-208ENST00000602632 FBXO46Q6PJ61 603 aaPredicted RBP7.56□□□□□ -1.2
UBE2E3-208ENST00000602632 MOB2Q70IA6 237 aa7.56□□□□□ -1.2
UBE2E3-208ENST00000602632 ARMC9Q7Z3E5 817 aa7.56□□□□□ -1.2
UBE2E3-208ENST00000602632 GCC1Q96CN9 775 aa7.56□□□□□ -1.2
UBE2E3-208ENST00000602632 CDC5LQ99459 802 aaKnown RBP7.56□□□□□ -1.2
UBE2E3-208ENST00000602632 CHMP4AQ9BY43 222 aa7.56□□□□□ -1.2
UBE2E3-208ENST00000602632 SNRKQ9NRH2 765 aa7.56□□□□□ -1.2
UBE2E3-208ENST00000602632 CWC25Q9NXE8 425 aaPredicted RBP7.56□□□□□ -1.2
UBE2E3-208ENST00000602632 ECM29Q5VYK3 1845 aa7.56□□□□□ -1.2
UBE2E3-208ENST00000602632 MYO3BQ8WXR4 1341 aa7.55□□□□□ -1.2
UBE2E3-208ENST00000602632 FKTNO75072 461 aa7.55□□□□□ -1.2
UBE2E3-208ENST00000602632 NBPF9Q3BBW0 867 aa7.55□□□□□ -1.2
UBE2E3-208ENST00000602632 NOM1Q5C9Z4 860 aaKnown RBP7.55□□□□□ -1.2
UBE2E3-208ENST00000602632 KIAA1211Q6ZU35 1233 aa7.55□□□□□ -1.2
UBE2E3-208ENST00000602632 HFE2Q6ZVN8 426 aa7.55□□□□□ -1.2
UBE2E3-208ENST00000602632 ALDH16A1Q8IZ83 802 aa7.55□□□□□ -1.2
UBE2E3-208ENST00000602632 GALNT11Q8NCW6 608 aa7.55□□□□□ -1.2
UBE2E3-208ENST00000602632 FAM84AQ96KN4 292 aa7.55□□□□□ -1.2
UBE2E3-208ENST00000602632 GMLQ99445 158 aa7.55□□□□□ -1.2
UBE2E3-208ENST00000602632 PHAXQ9H814 394 aaKnown RBP7.55□□□□□ -1.2
UBE2E3-208ENST00000602632 SCAF8Q9UPN6 1271 aaKnown RBP7.55□□□□□ -1.2
UBE2E3-208ENST00000602632 WNT10BO00744 389 aa7.54□□□□□ -1.2
UBE2E3-208ENST00000602632 INHBEP58166 350 aa7.54□□□□□ -1.2
UBE2E3-208ENST00000602632 CALD1Q05682 793 aaKnown RBP7.54□□□□□ -1.2
UBE2E3-208ENST00000602632 DUOXA2Q1HG44 320 aa7.54□□□□□ -1.2
UBE2E3-208ENST00000602632 STRIP1Q5VSL9 837 aa7.54□□□□□ -1.2
UBE2E3-208ENST00000602632 PRAMEF18Q5VWM3 479 aa7.54□□□□□ -1.2
UBE2E3-208ENST00000602632 ATG4DQ86TL0 474 aaPredicted RBP7.54□□□□□ -1.2
UBE2E3-208ENST00000602632 APOBEC3FQ8IUX4 373 aaKnown RBP7.54□□□□□ -1.2
UBE2E3-208ENST00000602632 STAG2Q8N3U4 1231 aa7.54□□□□□ -1.2
UBE2E3-208ENST00000602632 JARID2Q92833 1246 aaPredicted RBP7.54□□□□□ -1.2
UBE2E3-208ENST00000602632 IFT43Q96FT9 208 aa7.54□□□□□ -1.2
UBE2E3-208ENST00000602632 COA1Q9GZY4 146 aa7.54□□□□□ -1.2
UBE2E3-208ENST00000602632 TLR7Q9NYK1 1049 aaKnown RBP7.54□□□□□ -1.2
UBE2E3-208ENST00000602632 MED23Q9ULK4 1368 aa7.54□□□□□ -1.2
UBE2E3-208ENST00000602632 ZNF646O15015 1829 aaPredicted RBP7.54□□□□□ -1.2
UBE2E3-208ENST00000602632 MYBBP1AQ9BQG0 1328 aaKnown RBP7.53□□□□□ -1.2
UBE2E3-208ENST00000602632 ELL2O00472 640 aaPredicted RBP7.53□□□□□ -1.2
UBE2E3-208ENST00000602632 IGHMBP2P38935 993 aaKnown RBP7.53□□□□□ -1.2
UBE2E3-208ENST00000602632 CCT4P50991 539 aaKnown RBP7.53□□□□□ -1.2
UBE2E3-208ENST00000602632 CTSWP56202 376 aa7.53□□□□□ -1.2
UBE2E3-208ENST00000602632 GNAI1P63096 354 aa7.53□□□□□ -1.2
UBE2E3-208ENST00000602632 NEXNQ0ZGT2 675 aa7.53□□□□□ -1.2
UBE2E3-208ENST00000602632 PRKG1Q13976 671 aa7.53□□□□□ -1.2
UBE2E3-208ENST00000602632 DACT2Q5SW24 774 aa7.53□□□□□ -1.2
UBE2E3-208ENST00000602632 CCDC30Q5VVM6 783 aa7.53□□□□□ -1.2
UBE2E3-208ENST00000602632 TTLL5Q6EMB2 1281 aa7.53□□□□□ -1.2
UBE2E3-208ENST00000602632 TTLL10Q6ZVT0 673 aa7.53□□□□□ -1.2
UBE2E3-208ENST00000602632 KRT25Q7Z3Z0 450 aa7.53□□□□□ -1.2
UBE2E3-208ENST00000602632 KLHL23Q8NBE8 558 aa7.53□□□□□ -1.2
UBE2E3-208ENST00000602632 TSPAN10Q9H1Z9 355 aaPredicted RBP7.53□□□□□ -1.2
UBE2E3-208ENST00000602632 MINPP1Q9UNW1 487 aa7.53□□□□□ -1.2
UBE2E3-208ENST00000602632 LAMB1P07942 1786 aa7.53□□□□□ -1.2
UBE2E3-208ENST00000602632 CACNA1FO60840 1977 aa7.53□□□□□ -1.2
UBE2E3-208ENST00000602632 RBBP6Q7Z6E9 1792 aaKnown RBP7.52□□□□□ -1.21
UBE2E3-208ENST00000602632 MANSC4A6NHS7 340 aaPredicted RBP7.52□□□□□ -1.21
UBE2E3-208ENST00000602632 CYP26A1O43174 497 aa7.52□□□□□ -1.21
UBE2E3-208ENST00000602632 SASH1O94885 1247 aa7.52□□□□□ -1.21
UBE2E3-208ENST00000602632 F13BP05160 661 aa7.52□□□□□ -1.21
UBE2E3-208ENST00000602632 TARSP26639 723 aaKnown RBP7.52□□□□□ -1.21
UBE2E3-208ENST00000602632 PTPN12Q05209 780 aaKnown RBP7.52□□□□□ -1.21
UBE2E3-208ENST00000602632 INTS3Q68E01 1043 aaKnown RBP7.52□□□□□ -1.21
UBE2E3-208ENST00000602632 CILP2Q8IUL8 1156 aa7.52□□□□□ -1.21
UBE2E3-208ENST00000602632 TTLL11Q8NHH1 800 aa7.52□□□□□ -1.21
UBE2E3-208ENST00000602632 MXD3Q9BW11 206 aa7.52□□□□□ -1.21
UBE2E3-208ENST00000602632 ANKRD2Q9GZV1 360 aa7.52□□□□□ -1.21
UBE2E3-208ENST00000602632 IFT57Q9NWB7 429 aa7.52□□□□□ -1.21
UBE2E3-208ENST00000602632 COL1A1P02452 1464 aaPredicted RBP7.51□□□□□ -1.21
UBE2E3-208ENST00000602632 PPP1R12BO60237 982 aaPredicted RBP7.51□□□□□ -1.21
UBE2E3-208ENST00000602632 ZNF853P0CG23 659 aa7.51□□□□□ -1.21
UBE2E3-208ENST00000602632 HOXD8P13378 290 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms