RNA–Protein interactions for RNA: ENST00000602263.5

FARP1-240, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 867 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-240ENST00000602263 MROH7Q68CQ1 1323 aa12.41□□□□□ -0.42
FARP1-240ENST00000602263 TSPY2A6NKD2 308 aa12.41□□□□□ -0.42
FARP1-240ENST00000602263 DCDC2CA8MYV0 355 aa12.41□□□□□ -0.42
FARP1-240ENST00000602263 TMEM232C9JQI7 657 aa12.41□□□□□ -0.42
FARP1-240ENST00000602263 C6orf222P0C671 652 aaPredicted RBP12.41□□□□□ -0.42
FARP1-240ENST00000602263 SLC1A4P43007 532 aa12.41□□□□□ -0.42
FARP1-240ENST00000602263 FPGSQ05932 587 aa12.41□□□□□ -0.42
FARP1-240ENST00000602263 ARMCX2Q7L311 632 aa12.41□□□□□ -0.42
FARP1-240ENST00000602263 PCSK9Q8NBP7 692 aaKnown RBP12.41□□□□□ -0.42
FARP1-240ENST00000602263 GMCL1Q96IK5 515 aa12.41□□□□□ -0.42
FARP1-240ENST00000602263 RNPC3Q96LT9 517 aaKnown RBP12.41□□□□□ -0.42
FARP1-240ENST00000602263 GLT1D1Q96MS3 346 aa12.41□□□□□ -0.42
FARP1-240ENST00000602263 GUCD1Q96NT3 240 aa12.41□□□□□ -0.42
FARP1-240ENST00000602263 ABHD16BQ9H3Z7 469 aa12.41□□□□□ -0.42
FARP1-240ENST00000602263 ACAD9Q9H845 621 aa12.41□□□□□ -0.42
FARP1-240ENST00000602263 STX8Q9UNK0 236 aa12.41□□□□□ -0.42
FARP1-240ENST00000602263 PCDHB15Q9Y5E8 787 aa12.41□□□□□ -0.42
FARP1-240ENST00000602263 CDH23Q9H251 3354 aa12.41□□□□□ -0.42
FARP1-240ENST00000602263 EYSQ5T1H1 3165 aa12.4□□□□□ -0.42
FARP1-240ENST00000602263 CST5P28325 142 aaPredicted RBP12.4□□□□□ -0.42
FARP1-240ENST00000602263 SMAD3P84022 425 aaKnown RBP12.4□□□□□ -0.42
FARP1-240ENST00000602263 KCNA10Q16322 511 aa12.4□□□□□ -0.42
FARP1-240ENST00000602263 TKFCQ3LXA3 575 aa12.4□□□□□ -0.42
FARP1-240ENST00000602263 ANKRD33Q7Z3H0 272 aa12.4□□□□□ -0.42
FARP1-240ENST00000602263 KLHDC9Q8NEP7 349 aa12.4□□□□□ -0.42
FARP1-240ENST00000602263 OTUD7AQ8TE49 926 aaPredicted RBP12.4□□□□□ -0.42
FARP1-240ENST00000602263 STAG1Q8WVM7 1258 aa12.4□□□□□ -0.42
FARP1-240ENST00000602263 VTI1AQ96AJ9 217 aa12.4□□□□□ -0.42
FARP1-240ENST00000602263 TOX2Q96NM4 488 aa12.4□□□□□ -0.42
FARP1-240ENST00000602263 RNF146Q9NTX7 359 aa12.4□□□□□ -0.42
FARP1-240ENST00000602263 PRUNE2Q8WUY3 3088 aa12.4□□□□□ -0.42
FARP1-240ENST00000602263 LRRC37A2A6NM11 1700 aa12.4□□□□□ -0.43
FARP1-240ENST00000602263 ELP1O95163 1332 aa12.39□□□□□ -0.43
FARP1-240ENST00000602263 MCCP23508 829 aa12.39□□□□□ -0.43
FARP1-240ENST00000602263 CCDC144BQ3MJ40 725 aa12.39□□□□□ -0.43
FARP1-240ENST00000602263 GNASQ5JWF2 1037 aa12.39□□□□□ -0.43
FARP1-240ENST00000602263 NOL8Q76FK4 1167 aaKnown RBP12.39□□□□□ -0.43
FARP1-240ENST00000602263 CCDC144CPQ8IYA2 1237 aa12.39□□□□□ -0.43
FARP1-240ENST00000602263 FGD4Q96M96 766 aa12.39□□□□□ -0.43
FARP1-240ENST00000602263 A0A0U1RQG5 324 aaPredicted RBP12.38□□□□□ -0.43
FARP1-240ENST00000602263 MYADML2A6NDP7 307 aa12.38□□□□□ -0.43
FARP1-240ENST00000602263 TLR3O15455 904 aaKnown RBP12.38□□□□□ -0.43
FARP1-240ENST00000602263 RANBP6O60518 1105 aaKnown RBP12.38□□□□□ -0.43
FARP1-240ENST00000602263 PLA2G6O60733 806 aa12.38□□□□□ -0.43
FARP1-240ENST00000602263 ASGR1P07306 291 aa12.38□□□□□ -0.43
FARP1-240ENST00000602263 ITGB8P26012 769 aa12.38□□□□□ -0.43
FARP1-240ENST00000602263 GJA9P57773 515 aa12.38□□□□□ -0.43
FARP1-240ENST00000602263 CTDSPL2Q05D32 466 aa12.38□□□□□ -0.43
FARP1-240ENST00000602263 FAAP100Q0VG06 881 aa12.38□□□□□ -0.43
FARP1-240ENST00000602263 ANKRD45Q5TZF3 282 aa12.38□□□□□ -0.43
FARP1-240ENST00000602263 RCSD1Q6JBY9 416 aa12.38□□□□□ -0.43
FARP1-240ENST00000602263 CCDC174Q6PII3 467 aa12.38□□□□□ -0.43
FARP1-240ENST00000602263 CCDC129Q6ZRS4 1044 aa12.38□□□□□ -0.43
FARP1-240ENST00000602263 KCTD1Q719H9 257 aa12.38□□□□□ -0.43
FARP1-240ENST00000602263 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.38□□□□□ -0.43
FARP1-240ENST00000602263 CHMP4CQ96CF2 233 aa12.38□□□□□ -0.43
FARP1-240ENST00000602263 EVI5LQ96CN4 794 aa12.38□□□□□ -0.43
FARP1-240ENST00000602263 AGBL1Q96MI9 1066 aa12.38□□□□□ -0.43
FARP1-240ENST00000602263 TRERF1Q96PN7 1200 aa12.38□□□□□ -0.43
FARP1-240ENST00000602263 CDX2Q99626 313 aaPredicted RBP12.38□□□□□ -0.43
FARP1-240ENST00000602263 UPF3AQ9H1J1 476 aaKnown RBP12.38□□□□□ -0.43
FARP1-240ENST00000602263 SEMA6BQ9H3T3 888 aa12.38□□□□□ -0.43
FARP1-240ENST00000602263 A1CFQ9NQ94 594 aaKnown RBP12.38□□□□□ -0.43
FARP1-240ENST00000602263 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.38□□□□□ -0.43
FARP1-240ENST00000602263 LCTP09848 1927 aa12.37□□□□□ -0.43
FARP1-240ENST00000602263 ASB14A6NK59 587 aa12.37□□□□□ -0.43
FARP1-240ENST00000602263 TIMP1P01033 207 aa12.37□□□□□ -0.43
FARP1-240ENST00000602263 ALAS1P13196 640 aa12.37□□□□□ -0.43
FARP1-240ENST00000602263 RRP1P56182 461 aaKnown RBP12.37□□□□□ -0.43
FARP1-240ENST00000602263 CNTN2Q02246 1040 aa12.37□□□□□ -0.43
FARP1-240ENST00000602263 TNFAIP2Q03169 654 aa12.37□□□□□ -0.43
FARP1-240ENST00000602263 PPIGQ13427 754 aaKnown RBP eCLIP12.37□□□□□ -0.431e-12■□□□□ 10
FARP1-240ENST00000602263 CCDC96Q2M329 555 aa12.37□□□□□ -0.43
FARP1-240ENST00000602263 CCSAPQ6IQ19 270 aaPredicted RBP12.37□□□□□ -0.43
FARP1-240ENST00000602263 FAM133AQ8N9E0 248 aa12.37□□□□□ -0.43
FARP1-240ENST00000602263 HELLSQ9NRZ9 838 aa12.37□□□□□ -0.43
FARP1-240ENST00000602263 TOMM22Q9NS69 142 aa12.37□□□□□ -0.43
FARP1-240ENST00000602263 MTMR7Q9Y216 660 aa12.37□□□□□ -0.43
FARP1-240ENST00000602263 TMEM265A0A087WTH1 108 aa12.36□□□□□ -0.43
FARP1-240ENST00000602263 ARVCFO00192 962 aa12.36□□□□□ -0.43
FARP1-240ENST00000602263 ADCY6O43306 1168 aa12.36□□□□□ -0.43
FARP1-240ENST00000602263 ORC4O43929 436 aa12.36□□□□□ -0.43
FARP1-240ENST00000602263 ZEB2O60315 1214 aa12.36□□□□□ -0.43
FARP1-240ENST00000602263 EPHB4P54760 987 aa12.36□□□□□ -0.43
FARP1-240ENST00000602263 POTEDQ86YR6 584 aa12.36□□□□□ -0.43
FARP1-240ENST00000602263 DCAF4Q8WV16 495 aa12.36□□□□□ -0.43
FARP1-240ENST00000602263 KATNBL1Q9H079 304 aa12.36□□□□□ -0.43
FARP1-240ENST00000602263 AP5M1Q9H0R1 490 aa12.36□□□□□ -0.43
FARP1-240ENST00000602263 ANAPC4Q9UJX5 808 aa12.36□□□□□ -0.43
FARP1-240ENST00000602263 TBX21Q9UL17 535 aa12.36□□□□□ -0.43
FARP1-240ENST00000602263 CCPG1Q9ULG6 757 aa12.36□□□□□ -0.43
FARP1-240ENST00000602263 PRR12Q9ULL5 1215 aa12.36□□□□□ -0.43
FARP1-240ENST00000602263 MYH6P13533 1939 aa12.36□□□□□ -0.43
FARP1-240ENST00000602263 ZNF536O15090 1300 aa12.36□□□□□ -0.43
FARP1-240ENST00000602263 SALL3Q9BXA9 1300 aa12.36□□□□□ -0.43
FARP1-240ENST00000602263 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.35□□□□□ -0.43
FARP1-240ENST00000602263 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.35□□□□□ -0.43
FARP1-240ENST00000602263 SOWAHBA6NEL2 793 aa12.35□□□□□ -0.43
FARP1-240ENST00000602263 FOXP2O15409 715 aa12.35□□□□□ -0.43
FARP1-240ENST00000602263 NMT2O60551 498 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms