RNA–Protein interactions for RNA: ENST00000600380.1

FARP1-230, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-230ENST00000600380 RIOX1Q9H6W3 641 aa13.79□□□□□ -0.2
FARP1-230ENST00000600380 GOLGA8AA7E2F4 631 aa13.78□□□□□ -0.2
FARP1-230ENST00000600380 ATP2A1O14983 1001 aa13.78□□□□□ -0.2
FARP1-230ENST00000600380 PPFIA3O75145 1194 aa13.78□□□□□ -0.2
FARP1-230ENST00000600380 ERCC3P19447 782 aa13.78□□□□□ -0.2
FARP1-230ENST00000600380 SLC4A3P48751 1232 aa13.78□□□□□ -0.2
FARP1-230ENST00000600380 CCT2P78371 535 aaKnown RBP13.78□□□□□ -0.2
FARP1-230ENST00000600380 ST3GAL1Q11201 340 aa13.78□□□□□ -0.2
FARP1-230ENST00000600380 RTN1Q16799 776 aa13.78□□□□□ -0.2
FARP1-230ENST00000600380 CCDC82Q8N4S0 544 aa13.78□□□□□ -0.2
FARP1-230ENST00000600380 GTF3C2Q8WUA4 911 aaPredicted RBP13.78□□□□□ -0.2
FARP1-230ENST00000600380 PIGSQ96S52 555 aa13.78□□□□□ -0.2
FARP1-230ENST00000600380 UPF2Q9HAU5 1272 aaKnown RBP13.78□□□□□ -0.2
FARP1-230ENST00000600380 STK3Q13188 491 aa13.77□□□□□ -0.21
FARP1-230ENST00000600380 NID2Q14112 1375 aa13.77□□□□□ -0.21
FARP1-230ENST00000600380 CDC37Q16543 378 aaPredicted RBP13.77□□□□□ -0.21
FARP1-230ENST00000600380 ME3Q16798 604 aa13.77□□□□□ -0.21
FARP1-230ENST00000600380 QRICH1Q2TAL8 776 aa13.77□□□□□ -0.21
FARP1-230ENST00000600380 SNRNP48Q6IEG0 339 aaKnown RBP13.77□□□□□ -0.21
FARP1-230ENST00000600380 SYNE3Q6ZMZ3 975 aa13.77□□□□□ -0.21
FARP1-230ENST00000600380 RIOX2Q8IUF8 465 aa13.77□□□□□ -0.21
FARP1-230ENST00000600380 NECAB1Q8N987 351 aa13.77□□□□□ -0.21
FARP1-230ENST00000600380 CTCFLQ8NI51 663 aaPredicted RBP13.77□□□□□ -0.21
FARP1-230ENST00000600380 ZNF274Q96GC6 653 aaPredicted RBP13.77□□□□□ -0.21
FARP1-230ENST00000600380 TEX13BQ9BXU2 312 aa13.77□□□□□ -0.21
FARP1-230ENST00000600380 GJD2Q9UKL4 321 aa13.77□□□□□ -0.21
FARP1-230ENST00000600380 GABRQQ9UN88 632 aa13.77□□□□□ -0.21
FARP1-230ENST00000600380 FMNL1O95466 1100 aaPredicted RBP13.76□□□□□ -0.21
FARP1-230ENST00000600380 ICAM1P05362 532 aa13.76□□□□□ -0.21
FARP1-230ENST00000600380 CALM1P0DP23 149 aa13.76□□□□□ -0.21
FARP1-230ENST00000600380 CALM2P0DP24 149 aa13.76□□□□□ -0.21
FARP1-230ENST00000600380 CALM3P0DP25 149 aa13.76□□□□□ -0.21
FARP1-230ENST00000600380 KIF5BP33176 963 aa13.76□□□□□ -0.21
FARP1-230ENST00000600380 METAP2P50579 478 aaKnown RBP eCLIP13.76□□□□□ -0.21
FARP1-230ENST00000600380 RABEP1Q15276 862 aa13.76□□□□□ -0.21
FARP1-230ENST00000600380 NTRK3Q16288 839 aa13.76□□□□□ -0.21
FARP1-230ENST00000600380 MUM1L1Q5H9M0 696 aa13.76□□□□□ -0.21
FARP1-230ENST00000600380 OTOP1Q7RTM1 612 aa13.76□□□□□ -0.21
FARP1-230ENST00000600380 GPR142Q7Z601 462 aa13.76□□□□□ -0.21
FARP1-230ENST00000600380 CLEC4DQ8WXI8 215 aa13.76□□□□□ -0.21
FARP1-230ENST00000600380 ERO1AQ96HE7 468 aa13.76□□□□□ -0.21
FARP1-230ENST00000600380 SPZ1Q9BXG8 430 aa13.76□□□□□ -0.21
FARP1-230ENST00000600380 PRDM10Q9NQV6 1147 aa13.76□□□□□ -0.21
FARP1-230ENST00000600380 HOMER2Q9NSB8 354 aa13.76□□□□□ -0.21
FARP1-230ENST00000600380 HTTP42858 3142 aa13.75□□□□□ -0.21
FARP1-230ENST00000600380 CNTNAP5Q8WYK1 1306 aa13.75□□□□□ -0.21
FARP1-230ENST00000600380 DHX16O60231 1041 aaKnown RBP13.75□□□□□ -0.21
FARP1-230ENST00000600380 PFKFB2O60825 505 aa13.75□□□□□ -0.21
FARP1-230ENST00000600380 RCAN1P53805 252 aa13.75□□□□□ -0.21
FARP1-230ENST00000600380 OAZ1P54368 228 aa13.75□□□□□ -0.21
FARP1-230ENST00000600380 PRKCZQ05513 592 aa13.75□□□□□ -0.21
FARP1-230ENST00000600380 SCRN1Q12765 414 aa13.75□□□□□ -0.21
FARP1-230ENST00000600380 WDR78Q5VTH9 848 aa13.75□□□□□ -0.21
FARP1-230ENST00000600380 PLEKHH3Q7Z736 793 aa13.75□□□□□ -0.21
FARP1-230ENST00000600380 NCAPG2Q86XI2 1143 aa13.75□□□□□ -0.21
FARP1-230ENST00000600380 HOMER1Q86YM7 354 aa13.75□□□□□ -0.21
FARP1-230ENST00000600380 SHCBP1Q8NEM2 672 aa13.75□□□□□ -0.21
FARP1-230ENST00000600380 TBC1D5Q92609 795 aa13.75□□□□□ -0.21
FARP1-230ENST00000600380 USP6NLQ92738 828 aa13.75□□□□□ -0.21
FARP1-230ENST00000600380 CCPG1Q9ULG6 757 aa13.75□□□□□ -0.21
FARP1-230ENST00000600380 MGAMO43451 1857 aa13.74□□□□□ -0.21
FARP1-230ENST00000600380 PLXNB2O15031 1838 aa13.74□□□□□ -0.21
FARP1-230ENST00000600380 TNPO2O14787 897 aaKnown RBP13.74□□□□□ -0.21
FARP1-230ENST00000600380 OPLAHO14841 1288 aa13.74□□□□□ -0.21
FARP1-230ENST00000600380 ZBTB5O15062 677 aa13.74□□□□□ -0.21
FARP1-230ENST00000600380 COBLO75128 1261 aa13.74□□□□□ -0.21
FARP1-230ENST00000600380 CTDNEP1O95476 244 aa13.74□□□□□ -0.21
FARP1-230ENST00000600380 FDX1P10109 184 aa13.74□□□□□ -0.21
FARP1-230ENST00000600380 ALAS1P13196 640 aa13.74□□□□□ -0.21
FARP1-230ENST00000600380 PTPREP23469 700 aa13.74□□□□□ -0.21
FARP1-230ENST00000600380 SMARCA1P28370 1054 aa13.74□□□□□ -0.21
FARP1-230ENST00000600380 MAPK4P31152 587 aa13.74□□□□□ -0.21
FARP1-230ENST00000600380 GNAQP50148 359 aa13.74□□□□□ -0.21
FARP1-230ENST00000600380 FCGRTP55899 365 aa13.74□□□□□ -0.21
FARP1-230ENST00000600380 USH1GQ495M9 461 aa13.74□□□□□ -0.21
FARP1-230ENST00000600380 MORN1Q5T089 497 aa13.74□□□□□ -0.21
FARP1-230ENST00000600380 PHKBQ93100 1093 aa13.74□□□□□ -0.21
FARP1-230ENST00000600380 SHISA4Q96DD7 197 aa13.74□□□□□ -0.21
FARP1-230ENST00000600380 LZTS2Q9BRK4 669 aa13.74□□□□□ -0.21
FARP1-230ENST00000600380 RNF146Q9NTX7 359 aa13.74□□□□□ -0.21
FARP1-230ENST00000600380 TRIM17Q9Y577 477 aa13.74□□□□□ -0.21
FARP1-230ENST00000600380 CTDP1Q9Y5B0 961 aaPredicted RBP13.74□□□□□ -0.21
FARP1-230ENST00000600380 V9GY48 417 aaPredicted RBP13.74□□□□□ -0.21
FARP1-230ENST00000600380 PNMA6FA0A0J9YX94 578 aa13.73□□□□□ -0.21
FARP1-230ENST00000600380 NFIBO00712 420 aa13.73□□□□□ -0.21
FARP1-230ENST00000600380 SLC25A27O95847 323 aa13.73□□□□□ -0.21
FARP1-230ENST00000600380 PGK2P07205 417 aa13.73□□□□□ -0.21
FARP1-230ENST00000600380 CCNA1P78396 465 aa13.73□□□□□ -0.21
FARP1-230ENST00000600380 COL13A1Q5TAT6 717 aaPredicted RBP13.73□□□□□ -0.21
FARP1-230ENST00000600380 FBXO11Q86XK2 927 aa13.73□□□□□ -0.21
FARP1-230ENST00000600380 COA7Q96BR5 231 aa13.73□□□□□ -0.21
FARP1-230ENST00000600380 TRERF1Q96PN7 1200 aa13.73□□□□□ -0.21
FARP1-230ENST00000600380 PURBQ96QR8 312 aaKnown RBP13.73□□□□□ -0.21
FARP1-230ENST00000600380 MROH8Q9H579 483 aa13.73□□□□□ -0.21
FARP1-230ENST00000600380 RBM28Q9NW13 759 aaKnown RBP13.73□□□□□ -0.21
FARP1-230ENST00000600380 SRRDQ9UH36 339 aa13.73□□□□□ -0.21
FARP1-230ENST00000600380 LIMCH1Q9UPQ0 1083 aa13.73□□□□□ -0.21
FARP1-230ENST00000600380 ADAMTS3O15072 1205 aa13.72□□□□□ -0.21
FARP1-230ENST00000600380 FLT3LGP49771 235 aa13.72□□□□□ -0.21
FARP1-230ENST00000600380 GRB14Q14449 540 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms