RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 ZMYND8Q9ULU4 1186 aaPredicted RBP21.13■□□□□ 0.97
CHMP2A-203ENST00000597209 SNAI1O95863 264 aaPredicted RBP21.12■□□□□ 0.97
CHMP2A-203ENST00000597209 RARBP10826 455 aa21.12■□□□□ 0.97
CHMP2A-203ENST00000597209 AKR1A1P14550 325 aa21.12■□□□□ 0.97
CHMP2A-203ENST00000597209 TAL1P17542 331 aaPredicted RBP21.12■□□□□ 0.97
CHMP2A-203ENST00000597209 LRRC41Q15345 812 aa21.12■□□□□ 0.97
CHMP2A-203ENST00000597209 AGBL1Q96MI9 1066 aa21.12■□□□□ 0.97
CHMP2A-203ENST00000597209 CTNNA3Q9UI47 895 aa21.12■□□□□ 0.97
CHMP2A-203ENST00000597209 LAMA4Q16363 1823 aa21.12■□□□□ 0.97
CHMP2A-203ENST00000597209 GSPT1P15170 499 aaKnown RBP21.11■□□□□ 0.97
CHMP2A-203ENST00000597209 CCDC96Q2M329 555 aa21.11■□□□□ 0.97
CHMP2A-203ENST00000597209 CCDC178Q5BJE1 867 aa21.11■□□□□ 0.97
CHMP2A-203ENST00000597209 RASGRP2Q7LDG7 609 aa21.11■□□□□ 0.97
CHMP2A-203ENST00000597209 DGKHQ86XP1 1220 aa21.11■□□□□ 0.97
CHMP2A-203ENST00000597209 FGD4Q96M96 766 aa21.11■□□□□ 0.97
CHMP2A-203ENST00000597209 TRERF1Q96PN7 1200 aa21.11■□□□□ 0.97
CHMP2A-203ENST00000597209 RANBP17Q9H2T7 1088 aaKnown RBP21.11■□□□□ 0.97
CHMP2A-203ENST00000597209 XPNPEP3Q9NQH7 507 aa21.11■□□□□ 0.97
CHMP2A-203ENST00000597209 RNF146Q9NTX7 359 aa21.11■□□□□ 0.97
CHMP2A-203ENST00000597209 NEDD4P46934 1319 aa21.1■□□□□ 0.97
CHMP2A-203ENST00000597209 SNHG28P0DPA3 235 aa21.1■□□□□ 0.97
CHMP2A-203ENST00000597209 IRX6P78412 446 aaPredicted RBP21.1■□□□□ 0.97
CHMP2A-203ENST00000597209 SLC39A5Q6ZMH5 540 aa21.1■□□□□ 0.97
CHMP2A-203ENST00000597209 FAM133AQ8N9E0 248 aa21.1■□□□□ 0.97
CHMP2A-203ENST00000597209 CHMP4CQ96CF2 233 aa21.1■□□□□ 0.97
CHMP2A-203ENST00000597209 A1CFQ9NQ94 594 aaKnown RBP21.1■□□□□ 0.97
CHMP2A-203ENST00000597209 PCDH10Q9P2E7 1040 aa21.1■□□□□ 0.97
CHMP2A-203ENST00000597209 FAM184BQ9ULE4 1060 aa21.1■□□□□ 0.97
CHMP2A-203ENST00000597209 MTMR7Q9Y216 660 aa21.1■□□□□ 0.97
CHMP2A-203ENST00000597209 SMCHD1A6NHR9 2005 aa21.1■□□□□ 0.97
CHMP2A-203ENST00000597209 RAD50Q92878 1312 aa21.09■□□□□ 0.97
CHMP2A-203ENST00000597209 POTEB2H3BUK9 544 aa21.09■□□□□ 0.97
CHMP2A-203ENST00000597209 ICAM1P05362 532 aa21.09■□□□□ 0.97
CHMP2A-203ENST00000597209 PDHBP11177 359 aa21.09■□□□□ 0.97
CHMP2A-203ENST00000597209 SYN1P17600 705 aa21.09■□□□□ 0.97
CHMP2A-203ENST00000597209 IMMTQ16891 758 aaKnown RBP21.09■□□□□ 0.97
CHMP2A-203ENST00000597209 SYDE2Q5VT97 1194 aa21.09■□□□□ 0.97
CHMP2A-203ENST00000597209 TTBK2Q6IQ55 1244 aa21.09■□□□□ 0.97
CHMP2A-203ENST00000597209 CCDC174Q6PII3 467 aa21.09■□□□□ 0.97
CHMP2A-203ENST00000597209 RNF180Q86T96 592 aa21.09■□□□□ 0.97
CHMP2A-203ENST00000597209 ABHD16BQ9H3Z7 469 aa21.09■□□□□ 0.97
CHMP2A-203ENST00000597209 HOMER2Q9NSB8 354 aa21.09■□□□□ 0.97
CHMP2A-203ENST00000597209 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.09■□□□□ 0.97
CHMP2A-203ENST00000597209 PNMA2Q9UL42 364 aa21.09■□□□□ 0.97
CHMP2A-203ENST00000597209 PHF24Q9UPV7 400 aa21.09■□□□□ 0.97
CHMP2A-203ENST00000597209 TRIOBPQ9H2D6 2365 aa21.08■□□□□ 0.97
CHMP2A-203ENST00000597209 ALAS1P13196 640 aa21.08■□□□□ 0.97
CHMP2A-203ENST00000597209 ATN1P54259 1190 aaPredicted RBP21.08■□□□□ 0.97
CHMP2A-203ENST00000597209 ZNF543Q08ER8 600 aa21.08■□□□□ 0.97
CHMP2A-203ENST00000597209 ACVR2BQ13705 512 aa21.08■□□□□ 0.97
CHMP2A-203ENST00000597209 SNX17Q15036 470 aa21.08■□□□□ 0.97
CHMP2A-203ENST00000597209 C1orf53Q5VUE5 145 aa21.08■□□□□ 0.97
CHMP2A-203ENST00000597209 IQCA1Q86XH1 822 aa21.08■□□□□ 0.97
CHMP2A-203ENST00000597209 ANKS1AQ92625 1134 aa21.08■□□□□ 0.97
CHMP2A-203ENST00000597209 ADAMTS4O75173 837 aa21.07■□□□□ 0.96
CHMP2A-203ENST00000597209 SLC16A2P36021 539 aa21.07■□□□□ 0.96
CHMP2A-203ENST00000597209 MAGEA10P43363 369 aaPredicted RBP21.07■□□□□ 0.96
CHMP2A-203ENST00000597209 RTP1P59025 263 aa21.07■□□□□ 0.96
CHMP2A-203ENST00000597209 SNAP25P60880 206 aa21.07■□□□□ 0.96
CHMP2A-203ENST00000597209 CNTN2Q02246 1040 aa21.07■□□□□ 0.96
CHMP2A-203ENST00000597209 ARMCX2Q7L311 632 aa21.07■□□□□ 0.96
CHMP2A-203ENST00000597209 TSEN34Q9BSV6 310 aaKnown RBP21.07■□□□□ 0.96
CHMP2A-203ENST00000597209 CCPG1Q9ULG6 757 aa21.07■□□□□ 0.96
CHMP2A-203ENST00000597209 FRMPD2Q68DX3 1309 aaPredicted RBP21.06■□□□□ 0.96
CHMP2A-203ENST00000597209 KDM4AO75164 1064 aa21.06■□□□□ 0.96
CHMP2A-203ENST00000597209 DUSP11O75319 330 aaKnown RBP21.06■□□□□ 0.96
CHMP2A-203ENST00000597209 ADCYAP1R1P41586 468 aa21.06■□□□□ 0.96
CHMP2A-203ENST00000597209 GPATCH4Q5T3I0 446 aaKnown RBP21.06■□□□□ 0.96
CHMP2A-203ENST00000597209 CCDC144CPQ8IYA2 1237 aa21.06■□□□□ 0.96
CHMP2A-203ENST00000597209 RUFY2Q8WXA3 655 aa21.06■□□□□ 0.96
CHMP2A-203ENST00000597209 KRT23Q9C075 422 aa21.06■□□□□ 0.96
CHMP2A-203ENST00000597209 IL25Q9H293 177 aa21.06■□□□□ 0.96
CHMP2A-203ENST00000597209 CNNM2Q9H8M5 875 aa21.06■□□□□ 0.96
CHMP2A-203ENST00000597209 GPCPD1Q9NPB8 672 aa21.06■□□□□ 0.96
CHMP2A-203ENST00000597209 CYP39A1Q9NYL5 469 aa21.06■□□□□ 0.96
CHMP2A-203ENST00000597209 ZHX1Q9UKY1 873 aaPredicted RBP21.06■□□□□ 0.96
CHMP2A-203ENST00000597209 SOWAHBA6NEL2 793 aa21.05■□□□□ 0.96
CHMP2A-203ENST00000597209 ASB14A6NK59 587 aa21.05■□□□□ 0.96
CHMP2A-203ENST00000597209 PGK1P00558 417 aa21.05■□□□□ 0.96
CHMP2A-203ENST00000597209 MYCNP04198 464 aaPredicted RBP21.05■□□□□ 0.96
CHMP2A-203ENST00000597209 MUM1L1Q5H9M0 696 aa21.05■□□□□ 0.96
CHMP2A-203ENST00000597209 KLHDC9Q8NEP7 349 aa21.05■□□□□ 0.96
CHMP2A-203ENST00000597209 ZSCAN10Q96SZ4 725 aaPredicted RBP21.05■□□□□ 0.96
CHMP2A-203ENST00000597209 ZKSCAN3Q9BRR0 538 aa21.05■□□□□ 0.96
CHMP2A-203ENST00000597209 KATNBL1Q9H079 304 aa21.05■□□□□ 0.96
CHMP2A-203ENST00000597209 ZSWIM5Q9P217 1185 aa21.05■□□□□ 0.96
CHMP2A-203ENST00000597209 B4E1Z4 1266 aa21.04■□□□□ 0.96
CHMP2A-203ENST00000597209 CHMLP26374 656 aa21.04■□□□□ 0.96
CHMP2A-203ENST00000597209 WDR19Q8NEZ3 1342 aa21.04■□□□□ 0.96
CHMP2A-203ENST00000597209 SYNRGQ9UMZ2 1314 aa21.04■□□□□ 0.96
CHMP2A-203ENST00000597209 CST5P28325 142 aaPredicted RBP21.03■□□□□ 0.96
CHMP2A-203ENST00000597209 CCDC144BQ3MJ40 725 aa21.03■□□□□ 0.96
CHMP2A-203ENST00000597209 PNMA1Q8ND90 353 aa21.03■□□□□ 0.96
CHMP2A-203ENST00000597209 FERMT2Q96AC1 680 aa21.03■□□□□ 0.96
CHMP2A-203ENST00000597209 LENG1Q96BZ8 264 aaPredicted RBP21.03■□□□□ 0.96
CHMP2A-203ENST00000597209 UPF3AQ9H1J1 476 aaKnown RBP21.03■□□□□ 0.96
CHMP2A-203ENST00000597209 KAT14Q9H8E8 782 aa21.03■□□□□ 0.96
CHMP2A-203ENST00000597209 PRKAG2Q9UGJ0 569 aa21.03■□□□□ 0.96
CHMP2A-203ENST00000597209 ATP11BQ9Y2G3 1177 aa21.03■□□□□ 0.96
CHMP2A-203ENST00000597209 LOC102724159A0A0B4J2E5 919 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms