RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 AKR1B15C9JRZ8 316 aaPredicted RBP25.62■■□□□ 1.69
SRRM1-222ENST00000596378 ZSCAN12O43309 604 aa25.62■■□□□ 1.69
SRRM1-222ENST00000596378 KRT31Q15323 416 aa25.62■■□□□ 1.69
SRRM1-222ENST00000596378 ELF2Q15723 593 aa25.62■■□□□ 1.69
SRRM1-222ENST00000596378 ERO1AQ96HE7 468 aa25.62■■□□□ 1.69
SRRM1-222ENST00000596378 BIN2Q9UBW5 565 aaPredicted RBP25.62■■□□□ 1.69
SRRM1-222ENST00000596378 PDHBP11177 359 aa25.62■■□□□ 1.69
SRRM1-222ENST00000596378 NONOQ15233 471 aaKnown RBP eCLIP25.62■■□□□ 1.69
SRRM1-222ENST00000596378 GLIPR1L2Q4G1C9 344 aa25.62■■□□□ 1.69
SRRM1-222ENST00000596378 CCDC93Q567U6 631 aa25.62■■□□□ 1.69
SRRM1-222ENST00000596378 JAKMIP3Q5VZ66 844 aa25.62■■□□□ 1.69
SRRM1-222ENST00000596378 DPP8Q6V1X1 898 aaPredicted RBP25.62■■□□□ 1.69
SRRM1-222ENST00000596378 C6orf50Q9HD87 102 aa25.62■■□□□ 1.69
SRRM1-222ENST00000596378 TMEM260Q9NX78 707 aa25.62■■□□□ 1.69
SRRM1-222ENST00000596378 TTF2Q9UNY4 1162 aaKnown RBP25.62■■□□□ 1.69
SRRM1-222ENST00000596378 TRIM49BA6NDI0 452 aa25.61■■□□□ 1.69
SRRM1-222ENST00000596378 SOWAHDA6NJG2 315 aa25.61■■□□□ 1.69
SRRM1-222ENST00000596378 SLURP2P0DP57 97 aa25.61■■□□□ 1.69
SRRM1-222ENST00000596378 CTAGE1Q96RT6 745 aa25.61■■□□□ 1.69
SRRM1-222ENST00000596378 RMND1Q9NWS8 449 aa25.61■■□□□ 1.69
SRRM1-222ENST00000596378 NOVP48745 357 aa25.6■■□□□ 1.69
SRRM1-222ENST00000596378 KRT25Q7Z3Z0 450 aa25.6■■□□□ 1.69
SRRM1-222ENST00000596378 CCDC12Q8WUD4 166 aaPredicted RBP25.6■■□□□ 1.69
SRRM1-222ENST00000596378 COA1Q9GZY4 146 aa25.6■■□□□ 1.69
SRRM1-222ENST00000596378 VPS16Q9H269 839 aa25.6■■□□□ 1.69
SRRM1-222ENST00000596378 MTMR4Q9NYA4 1195 aa25.6■■□□□ 1.69
SRRM1-222ENST00000596378 MYH8P13535 1937 aa25.6■■□□□ 1.69
SRRM1-222ENST00000596378 SPDYE4A6NLX3 237 aa25.6■■□□□ 1.69
SRRM1-222ENST00000596378 GABPAQ06546 454 aa25.6■■□□□ 1.69
SRRM1-222ENST00000596378 FILIP1LQ4L180 1135 aa25.6■■□□□ 1.69
SRRM1-222ENST00000596378 SOGA3Q5TF21 947 aa25.6■■□□□ 1.69
SRRM1-222ENST00000596378 PPFIBP1Q86W92 1011 aa25.6■■□□□ 1.69
SRRM1-222ENST00000596378 TAB2Q9NYJ8 693 aa25.6■■□□□ 1.69
SRRM1-222ENST00000596378 PHLPP2Q6ZVD8 1323 aa25.6■■□□□ 1.69
SRRM1-222ENST00000596378 OR52Z1P0C646 297 aa25.59■■□□□ 1.69
SRRM1-222ENST00000596378 KMT5BQ4FZB7 885 aa25.59■■□□□ 1.69
SRRM1-222ENST00000596378 TBCKQ8TEA7 893 aa25.59■■□□□ 1.69
SRRM1-222ENST00000596378 ZC3H12CQ9C0D7 883 aaKnown RBP25.59■■□□□ 1.69
SRRM1-222ENST00000596378 GNA11P29992 359 aa25.59■■□□□ 1.69
SRRM1-222ENST00000596378 CASP14P31944 242 aa25.59■■□□□ 1.69
SRRM1-222ENST00000596378 COA7Q96BR5 231 aa25.59■■□□□ 1.69
SRRM1-222ENST00000596378 CCSER1Q9C0I3 900 aa25.59■■□□□ 1.69
SRRM1-222ENST00000596378 N4BP3O15049 544 aa25.58■■□□□ 1.69
SRRM1-222ENST00000596378 KLRC4O43908 158 aa25.58■■□□□ 1.69
SRRM1-222ENST00000596378 SRGNP10124 158 aa25.58■■□□□ 1.69
SRRM1-222ENST00000596378 PRPHP41219 470 aa25.58■■□□□ 1.69
SRRM1-222ENST00000596378 PMS1P54277 932 aaKnown RBP25.58■■□□□ 1.69
SRRM1-222ENST00000596378 NEK8Q86SG6 692 aa25.58■■□□□ 1.69
SRRM1-222ENST00000596378 GPCPD1Q9NPB8 672 aa25.58■■□□□ 1.69
SRRM1-222ENST00000596378 USP40Q9NVE5 1235 aa25.58■■□□□ 1.69
SRRM1-222ENST00000596378 LAD1O00515 517 aa25.58■■□□□ 1.68
SRRM1-222ENST00000596378 GYPCP04921 128 aa25.58■■□□□ 1.68
SRRM1-222ENST00000596378 PLCG1P19174 1290 aa25.58■■□□□ 1.68
SRRM1-222ENST00000596378 CBX1P83916 185 aa25.58■■□□□ 1.68
SRRM1-222ENST00000596378 CABP7Q86V35 215 aa25.58■■□□□ 1.68
SRRM1-222ENST00000596378 UBE2Q2Q8WVN8 375 aa25.58■■□□□ 1.68
SRRM1-222ENST00000596378 PANX2Q96RD6 677 aa25.58■■□□□ 1.68
SRRM1-222ENST00000596378 RIOX1Q9H6W3 641 aa25.58■■□□□ 1.68
SRRM1-222ENST00000596378 LIMA1Q9UHB6 759 aaKnown RBP25.58■■□□□ 1.68
SRRM1-222ENST00000596378 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.58■■□□□ 1.688e-12■■■□□ 15
SRRM1-222ENST00000596378 KCNJ18B7U540 433 aa25.57■■□□□ 1.68
SRRM1-222ENST00000596378 TUBB4AP04350 444 aa25.57■■□□□ 1.68
SRRM1-222ENST00000596378 FXR1P51114 621 aaKnown RBP eCLIP25.57■■□□□ 1.68
SRRM1-222ENST00000596378 KCNJ12Q14500 433 aa25.57■■□□□ 1.68
SRRM1-222ENST00000596378 TCP11X2Q5H9J9 407 aa25.57■■□□□ 1.68
SRRM1-222ENST00000596378 WDR24Q96S15 920 aa25.57■■□□□ 1.68
SRRM1-222ENST00000596378 KBTBD4Q9NVX7 518 aa25.57■■□□□ 1.68
SRRM1-222ENST00000596378 CGNQ9P2M7 1197 aaKnown RBP25.57■■□□□ 1.68
SRRM1-222ENST00000596378 TECP42680 631 aa25.57■■□□□ 1.68
SRRM1-222ENST00000596378 RAD9BQ6WBX8 426 aa25.57■■□□□ 1.68
SRRM1-222ENST00000596378 TMC4Q7Z404 712 aa25.57■■□□□ 1.68
SRRM1-222ENST00000596378 POTEDQ86YR6 584 aa25.57■■□□□ 1.68
SRRM1-222ENST00000596378 ADSSL1Q8N142 457 aa25.57■■□□□ 1.68
SRRM1-222ENST00000596378 REXO1Q8N1G1 1221 aaKnown RBP25.57■■□□□ 1.68
SRRM1-222ENST00000596378 MRPL44Q9H9J2 332 aaKnown RBP25.57■■□□□ 1.68
SRRM1-222ENST00000596378 PLIN4Q96Q06 1357 aa25.56■■□□□ 1.68
SRRM1-222ENST00000596378 MFAP3LO75121 409 aa25.56■■□□□ 1.68
SRRM1-222ENST00000596378 URI1O94763 535 aaPredicted RBP25.56■■□□□ 1.68
SRRM1-222ENST00000596378 COPB1P53618 953 aaKnown RBP25.56■■□□□ 1.68
SRRM1-222ENST00000596378 ERCC6LQ2NKX8 1250 aa25.56■■□□□ 1.68
SRRM1-222ENST00000596378 COL23A1Q86Y22 540 aaPredicted RBP25.56■■□□□ 1.68
SRRM1-222ENST00000596378 A0A0U1RQJ8 604 aa25.55■■□□□ 1.68
SRRM1-222ENST00000596378 ATRIPQ8WXE1 791 aa25.55■■□□□ 1.68
SRRM1-222ENST00000596378 SMARCA1P28370 1054 aa25.55■■□□□ 1.68
SRRM1-222ENST00000596378 GNG11P61952 73 aa25.55■■□□□ 1.68
SRRM1-222ENST00000596378 KCNQ5Q9NR82 932 aa25.55■■□□□ 1.68
SRRM1-222ENST00000596378 SERPINB13Q9UIV8 391 aa25.55■■□□□ 1.68
SRRM1-222ENST00000596378 IGKV6D-41A0A0C4DH26 115 aa25.54■■□□□ 1.68
SRRM1-222ENST00000596378 RNF225M0QZC1 329 aaPredicted RBP25.54■■□□□ 1.68
SRRM1-222ENST00000596378 IRF2BP1Q8IU81 584 aa25.54■■□□□ 1.68
SRRM1-222ENST00000596378 PARP3Q9Y6F1 533 aa25.54■■□□□ 1.68
SRRM1-222ENST00000596378 QSER1Q2KHR3 1735 aa25.54■■□□□ 1.68
SRRM1-222ENST00000596378 LRRC10BA6NIK2 292 aa25.54■■□□□ 1.68
SRRM1-222ENST00000596378 NFIAQ12857 509 aa25.54■■□□□ 1.68
SRRM1-222ENST00000596378 CDC42EP5Q6NZY7 148 aa25.54■■□□□ 1.68
SRRM1-222ENST00000596378 SHMT1P34896 483 aa25.53■■□□□ 1.68
SRRM1-222ENST00000596378 IRX2Q9BZI1 471 aaPredicted RBP25.53■■□□□ 1.68
SRRM1-222ENST00000596378 COL11A2P13942 1736 aaPredicted RBP25.53■■□□□ 1.68
SRRM1-222ENST00000596378 NPR1P16066 1061 aa25.53■■□□□ 1.68
SRRM1-222ENST00000596378 TXKP42681 527 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms