RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 RANBP17Q9H2T7 1088 aaKnown RBP12.35□□□□□ -0.43
SMAD4-214ENST00000592186 ZFYVE28Q9HCC9 887 aa12.35□□□□□ -0.43
SMAD4-214ENST00000592186 RABGAP1Q9Y3P9 1069 aa12.35□□□□□ -0.43
SMAD4-214ENST00000592186 MYH4Q9Y623 1939 aa12.35□□□□□ -0.43
SMAD4-214ENST00000592186 SPDYE16A6NNV3 312 aaPredicted RBP12.34□□□□□ -0.43
SMAD4-214ENST00000592186 hCG_1984214I3L0E3 225 aa12.34□□□□□ -0.43
SMAD4-214ENST00000592186 IGF2BP3O00425 579 aaKnown RBP eCLIP12.34□□□□□ -0.43
SMAD4-214ENST00000592186 CA12O43570 354 aa12.34□□□□□ -0.43
SMAD4-214ENST00000592186 PDIA4P13667 645 aaKnown RBP12.34□□□□□ -0.43
SMAD4-214ENST00000592186 XBP1P17861 261 aa12.34□□□□□ -0.43
SMAD4-214ENST00000592186 TEX2Q8IWB9 1127 aa12.34□□□□□ -0.43
SMAD4-214ENST00000592186 CMTR1Q8N1G2 835 aaKnown RBP12.34□□□□□ -0.43
SMAD4-214ENST00000592186 ZNF713Q8N859 430 aaPredicted RBP12.34□□□□□ -0.43
SMAD4-214ENST00000592186 NSUN7Q8NE18 718 aaKnown RBP12.34□□□□□ -0.43
SMAD4-214ENST00000592186 SMARCC2Q8TAQ2 1214 aa12.34□□□□□ -0.43
SMAD4-214ENST00000592186 AMNQ9BXJ7 453 aa12.34□□□□□ -0.43
SMAD4-214ENST00000592186 MAF1Q9H063 256 aa12.34□□□□□ -0.43
SMAD4-214ENST00000592186 ORC3Q9UBD5 711 aaPredicted RBP12.34□□□□□ -0.43
SMAD4-214ENST00000592186 SMC3Q9UQE7 1217 aa12.34□□□□□ -0.43
SMAD4-214ENST00000592186 STK36Q9NRP7 1315 aa12.33□□□□□ -0.44
SMAD4-214ENST00000592186 PTPDC1A2A3K4 754 aa12.33□□□□□ -0.44
SMAD4-214ENST00000592186 CTDNEP1O95476 244 aa12.33□□□□□ -0.44
SMAD4-214ENST00000592186 ICAM1P05362 532 aa12.33□□□□□ -0.44
SMAD4-214ENST00000592186 COPB2P35606 906 aa12.33□□□□□ -0.44
SMAD4-214ENST00000592186 CCNA1P78396 465 aa12.33□□□□□ -0.44
SMAD4-214ENST00000592186 HTRA3P83110 453 aa12.33□□□□□ -0.44
SMAD4-214ENST00000592186 MAP2K1Q02750 393 aaPredicted RBP12.33□□□□□ -0.44
SMAD4-214ENST00000592186 TAF1CQ15572 869 aaPredicted RBP12.33□□□□□ -0.44
SMAD4-214ENST00000592186 CDC37Q16543 378 aaPredicted RBP12.33□□□□□ -0.44
SMAD4-214ENST00000592186 PFKFB3Q16875 520 aaPredicted RBP12.33□□□□□ -0.44
SMAD4-214ENST00000592186 TKFCQ3LXA3 575 aa12.33□□□□□ -0.44
SMAD4-214ENST00000592186 FBXO11Q86XK2 927 aa12.33□□□□□ -0.44
SMAD4-214ENST00000592186 FAM184AQ8NB25 1140 aa12.33□□□□□ -0.44
SMAD4-214ENST00000592186 RGS22Q8NE09 1264 aa12.33□□□□□ -0.44
SMAD4-214ENST00000592186 GPRC5AQ8NFJ5 357 aa12.33□□□□□ -0.44
SMAD4-214ENST00000592186 CCDC12Q8WUD4 166 aaPredicted RBP12.33□□□□□ -0.44
SMAD4-214ENST00000592186 PHKBQ93100 1093 aa12.33□□□□□ -0.44
SMAD4-214ENST00000592186 ATG4CQ96DT6 458 aa12.33□□□□□ -0.44
SMAD4-214ENST00000592186 PIGSQ96S52 555 aa12.33□□□□□ -0.44
SMAD4-214ENST00000592186 ZIC5Q96T25 663 aa12.33□□□□□ -0.44
SMAD4-214ENST00000592186 CFHR5Q9BXR6 569 aa12.33□□□□□ -0.44
SMAD4-214ENST00000592186 TEX13BQ9BXU2 312 aa12.33□□□□□ -0.44
SMAD4-214ENST00000592186 CPVLQ9H3G5 476 aa12.33□□□□□ -0.44
SMAD4-214ENST00000592186 CWC22Q9HCG8 908 aaKnown RBP12.33□□□□□ -0.44
SMAD4-214ENST00000592186 SH3GLB2Q9NR46 395 aa12.33□□□□□ -0.44
SMAD4-214ENST00000592186 CNTNAP5Q8WYK1 1306 aa12.32□□□□□ -0.44
SMAD4-214ENST00000592186 TLR2O60603 784 aa12.32□□□□□ -0.44
SMAD4-214ENST00000592186 SLC25A27O95847 323 aa12.32□□□□□ -0.44
SMAD4-214ENST00000592186 CYP2C8P10632 490 aa12.32□□□□□ -0.44
SMAD4-214ENST00000592186 SCG2P13521 617 aa12.32□□□□□ -0.44
SMAD4-214ENST00000592186 PDCP20941 246 aa12.32□□□□□ -0.44
SMAD4-214ENST00000592186 STAT3P40763 770 aa12.32□□□□□ -0.44
SMAD4-214ENST00000592186 SLC35G1Q2M3R5 365 aa12.32□□□□□ -0.44
SMAD4-214ENST00000592186 QRICH1Q2TAL8 776 aa12.32□□□□□ -0.44
SMAD4-214ENST00000592186 HOMER1Q86YM7 354 aa12.32□□□□□ -0.44
SMAD4-214ENST00000592186 BEGAINQ9BUH8 593 aa12.32□□□□□ -0.44
SMAD4-214ENST00000592186 GLT8D2Q9H1C3 349 aa12.32□□□□□ -0.44
SMAD4-214ENST00000592186 RBPJLQ9UBG7 517 aa12.32□□□□□ -0.44
SMAD4-214ENST00000592186 MORF4L1Q9UBU8 362 aa12.32□□□□□ -0.44
SMAD4-214ENST00000592186 PCDHA1Q9Y5I3 950 aa12.32□□□□□ -0.44
SMAD4-214ENST00000592186 LOC285556D6RIA3 1793 aa12.31□□□□□ -0.44
SMAD4-214ENST00000592186 ST3GAL1Q11201 340 aa12.31□□□□□ -0.44
SMAD4-214ENST00000592186 TRIM29Q14134 588 aa12.31□□□□□ -0.44
SMAD4-214ENST00000592186 TMEM132BQ14DG7 1078 aa12.31□□□□□ -0.44
SMAD4-214ENST00000592186 CCDC174Q6PII3 467 aa12.31□□□□□ -0.44
SMAD4-214ENST00000592186 CPXCR1Q8N123 301 aa12.31□□□□□ -0.44
SMAD4-214ENST00000592186 SAMD3Q8N6K7 520 aa12.31□□□□□ -0.44
SMAD4-214ENST00000592186 DNAJC5GQ8N7S2 189 aa12.31□□□□□ -0.44
SMAD4-214ENST00000592186 REPS2Q8NFH8 660 aa12.31□□□□□ -0.44
SMAD4-214ENST00000592186 PIBF1Q8WXW3 757 aa12.31□□□□□ -0.44
SMAD4-214ENST00000592186 DDX11Q96FC9 970 aa12.31□□□□□ -0.44
SMAD4-214ENST00000592186 MROH8Q9H579 483 aa12.31□□□□□ -0.44
SMAD4-214ENST00000592186 SAGE1Q9NXZ1 904 aa12.31□□□□□ -0.44
SMAD4-214ENST00000592186 BARHL2Q9NY43 387 aa12.31□□□□□ -0.44
SMAD4-214ENST00000592186 FBXO40Q9UH90 709 aa12.31□□□□□ -0.44
SMAD4-214ENST00000592186 ZNF214Q9UL59 606 aaPredicted RBP12.31□□□□□ -0.44
SMAD4-214ENST00000592186 CCPG1Q9ULG6 757 aa12.31□□□□□ -0.44
SMAD4-214ENST00000592186 MRPL11Q9Y3B7 192 aaKnown RBP12.31□□□□□ -0.44
SMAD4-214ENST00000592186 ABCB11O95342 1321 aa12.31□□□□□ -0.44
SMAD4-214ENST00000592186 JAK2O60674 1132 aa12.3□□□□□ -0.44
SMAD4-214ENST00000592186 FDPSP14324 419 aaKnown RBP12.3□□□□□ -0.44
SMAD4-214ENST00000592186 ERVK-9P63128 1117 aa12.3□□□□□ -0.44
SMAD4-214ENST00000592186 ERVK-24P63145 666 aa12.3□□□□□ -0.44
SMAD4-214ENST00000592186 PLS1Q14651 629 aa12.3□□□□□ -0.44
SMAD4-214ENST00000592186 PKN1Q16512 942 aa12.3□□□□□ -0.44
SMAD4-214ENST00000592186 FAM110CQ1W6H9 321 aa12.3□□□□□ -0.44
SMAD4-214ENST00000592186 GALNT17Q6IS24 598 aa12.3□□□□□ -0.44
SMAD4-214ENST00000592186 PPP1R18Q6NYC8 613 aa12.3□□□□□ -0.44
SMAD4-214ENST00000592186 HEATR3Q7Z4Q2 680 aa12.3□□□□□ -0.44
SMAD4-214ENST00000592186 MCF2L2Q86YR7 1114 aa12.3□□□□□ -0.44
SMAD4-214ENST00000592186 RIOX2Q8IUF8 465 aa12.3□□□□□ -0.44
SMAD4-214ENST00000592186 CCAR1Q8IX12 1150 aaKnown RBP12.3□□□□□ -0.44
SMAD4-214ENST00000592186 SHCBP1Q8NEM2 672 aa12.3□□□□□ -0.44
SMAD4-214ENST00000592186 CHST13Q8NET6 341 aa12.3□□□□□ -0.44
SMAD4-214ENST00000592186 CCDC148Q8NFR7 591 aa12.3□□□□□ -0.44
SMAD4-214ENST00000592186 SPATC1LQ9H0A9 340 aa12.3□□□□□ -0.44
SMAD4-214ENST00000592186 RAVER2Q9HCJ3 691 aaKnown RBP12.3□□□□□ -0.44
SMAD4-214ENST00000592186 RNF186Q9NXI6 227 aa12.3□□□□□ -0.44
SMAD4-214ENST00000592186 MAP3K20Q9NYL2 800 aaKnown RBP12.3□□□□□ -0.44
SMAD4-214ENST00000592186 ZNF536O15090 1300 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms