RNA–Protein interactions for RNA: ENST00000592051.1

CIRBP-236, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-236	ENST00000592051	SAGE1	Q9NXZ1	904 aa		13.17	□□□□□ -0.3
CIRBP-236	ENST00000592051	TSKS	Q9UJT2	592 aa		13.17	□□□□□ -0.3
CIRBP-236	ENST00000592051	RIPK3	Q9Y572	518 aa		13.17	□□□□□ -0.3
CIRBP-236	ENST00000592051	ATP2A1	O14983	1001 aa		13.16	□□□□□ -0.3
CIRBP-236	ENST00000592051	ZBED4	O75132	1171 aa		13.16	□□□□□ -0.3
CIRBP-236	ENST00000592051	CTGF	P29279	349 aa		13.16	□□□□□ -0.3
CIRBP-236	ENST00000592051	PKN1	Q16512	942 aa		13.16	□□□□□ -0.3
CIRBP-236	ENST00000592051	CDC37	Q16543	378 aa	Predicted RBP	13.16	□□□□□ -0.3
CIRBP-236	ENST00000592051	CCDC174	Q6PII3	467 aa		13.16	□□□□□ -0.3
CIRBP-236	ENST00000592051	CCDC83	Q8IWF9	413 aa		13.16	□□□□□ -0.3
CIRBP-236	ENST00000592051	MB21D1	Q8N884	522 aa		13.16	□□□□□ -0.3
CIRBP-236	ENST00000592051	NSUN7	Q8NE18	718 aa	Known RBP	13.16	□□□□□ -0.3
CIRBP-236	ENST00000592051	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.16	□□□□□ -0.3
CIRBP-236	ENST00000592051	SHISA4	Q96DD7	197 aa		13.16	□□□□□ -0.3
CIRBP-236	ENST00000592051	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.16	□□□□□ -0.3
CIRBP-236	ENST00000592051		V9GY48	417 aa	Predicted RBP	13.16	□□□□□ -0.3
CIRBP-236	ENST00000592051	CCDC196	A0A1B0GTZ2	297 aa		13.15	□□□□□ -0.3
CIRBP-236	ENST00000592051	JAK2	O60674	1132 aa		13.15	□□□□□ -0.3
CIRBP-236	ENST00000592051	FDPS	P14324	419 aa	Known RBP	13.15	□□□□□ -0.3
CIRBP-236	ENST00000592051	MCM2	P49736	904 aa		13.15	□□□□□ -0.3
CIRBP-236	ENST00000592051	ERVK-9	P63128	1117 aa		13.15	□□□□□ -0.3
CIRBP-236	ENST00000592051	ERVK-24	P63145	666 aa		13.15	□□□□□ -0.3
CIRBP-236	ENST00000592051	FAM110C	Q1W6H9	321 aa		13.15	□□□□□ -0.3
CIRBP-236	ENST00000592051	HOMER1	Q86YM7	354 aa		13.15	□□□□□ -0.3
CIRBP-236	ENST00000592051	CPXCR1	Q8N123	301 aa		13.15	□□□□□ -0.3
CIRBP-236	ENST00000592051	GPRC5A	Q8NFJ5	357 aa		13.15	□□□□□ -0.3
CIRBP-236	ENST00000592051	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.15	□□□□□ -0.3
CIRBP-236	ENST00000592051	SPATC1L	Q9H0A9	340 aa		13.15	□□□□□ -0.3
CIRBP-236	ENST00000592051	PORCN	Q9H237	461 aa		13.15	□□□□□ -0.3
CIRBP-236	ENST00000592051	TSHZ2	Q9NRE2	1034 aa		13.15	□□□□□ -0.3
CIRBP-236	ENST00000592051	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.15	□□□□□ -0.3
CIRBP-236	ENST00000592051		A0A0G2JMZ2	1700 aa		13.15	□□□□□ -0.3
CIRBP-236	ENST00000592051	PNMA6F	A0A0J9YX94	578 aa		13.14	□□□□□ -0.31
CIRBP-236	ENST00000592051	GPR25	O00155	361 aa		13.14	□□□□□ -0.31
CIRBP-236	ENST00000592051	ZBTB5	O15062	677 aa		13.14	□□□□□ -0.31
CIRBP-236	ENST00000592051	PRPF3	O43395	683 aa	Known RBP	13.14	□□□□□ -0.31
CIRBP-236	ENST00000592051	DHX16	O60231	1041 aa	Known RBP	13.14	□□□□□ -0.31
CIRBP-236	ENST00000592051	FMNL1	O95466	1100 aa	Predicted RBP	13.14	□□□□□ -0.31
CIRBP-236	ENST00000592051	ICAM1	P05362	532 aa		13.14	□□□□□ -0.31
CIRBP-236	ENST00000592051	FDX1	P10109	184 aa		13.14	□□□□□ -0.31
CIRBP-236	ENST00000592051	STAT3	P40763	770 aa		13.14	□□□□□ -0.31
CIRBP-236	ENST00000592051	OAZ1	P54368	228 aa		13.14	□□□□□ -0.31
CIRBP-236	ENST00000592051	CUL4A	Q13619	759 aa		13.14	□□□□□ -0.31
CIRBP-236	ENST00000592051	TYW1B	Q6NUM6	668 aa		13.14	□□□□□ -0.31
CIRBP-236	ENST00000592051	EFCC1	Q9HA90	598 aa		13.14	□□□□□ -0.31
CIRBP-236	ENST00000592051	PARP14	Q460N5	1801 aa		13.13	□□□□□ -0.31
CIRBP-236	ENST00000592051	OPLAH	O14841	1288 aa		13.13	□□□□□ -0.31
CIRBP-236	ENST00000592051	FOXN1	O15353	648 aa		13.13	□□□□□ -0.31
CIRBP-236	ENST00000592051	MUM1L1	Q5H9M0	696 aa		13.13	□□□□□ -0.31
CIRBP-236	ENST00000592051	SNRNP48	Q6IEG0	339 aa	Known RBP	13.13	□□□□□ -0.31
CIRBP-236	ENST00000592051	RIOX2	Q8IUF8	465 aa		13.13	□□□□□ -0.31
CIRBP-236	ENST00000592051	SMARCC2	Q8TAQ2	1214 aa		13.13	□□□□□ -0.31
CIRBP-236	ENST00000592051	CLEC4D	Q8WXI8	215 aa		13.13	□□□□□ -0.31
CIRBP-236	ENST00000592051	COA7	Q96BR5	231 aa		13.13	□□□□□ -0.31
CIRBP-236	ENST00000592051	RRP36	Q96EU6	259 aa	Known RBP	13.13	□□□□□ -0.31
CIRBP-236	ENST00000592051	AIFM3	Q96NN9	605 aa		13.13	□□□□□ -0.31
CIRBP-236	ENST00000592051	SLC26A6	Q9BXS9	759 aa		13.13	□□□□□ -0.31
CIRBP-236	ENST00000592051	TEX13B	Q9BXU2	312 aa		13.13	□□□□□ -0.31
CIRBP-236	ENST00000592051	ARHGAP39	Q9C0H5	1083 aa		13.13	□□□□□ -0.31
CIRBP-236	ENST00000592051	PTPDC1	A2A3K4	754 aa		13.12	□□□□□ -0.31
CIRBP-236	ENST00000592051		K7ELQ4	463 aa	Predicted RBP	13.12	□□□□□ -0.31
CIRBP-236	ENST00000592051	CPLX1	O14810	134 aa		13.12	□□□□□ -0.31
CIRBP-236	ENST00000592051	ADAMTS3	O15072	1205 aa		13.12	□□□□□ -0.31
CIRBP-236	ENST00000592051	HSPA8	P11142	646 aa	Known RBP	13.12	□□□□□ -0.31
CIRBP-236	ENST00000592051	ERCC3	P19447	782 aa		13.12	□□□□□ -0.31
CIRBP-236	ENST00000592051	PLS1	Q14651	629 aa		13.12	□□□□□ -0.31
CIRBP-236	ENST00000592051	PFKFB3	Q16875	520 aa	Predicted RBP	13.12	□□□□□ -0.31
CIRBP-236	ENST00000592051	NOM1	Q5C9Z4	860 aa	Known RBP	13.12	□□□□□ -0.31
CIRBP-236	ENST00000592051	WWC2	Q6AWC2	1192 aa		13.12	□□□□□ -0.31
CIRBP-236	ENST00000592051	FBXO11	Q86XK2	927 aa		13.12	□□□□□ -0.31
CIRBP-236	ENST00000592051	SHCBP1	Q8NEM2	672 aa		13.12	□□□□□ -0.31
CIRBP-236	ENST00000592051	TBC1D5	Q92609	795 aa		13.12	□□□□□ -0.31
CIRBP-236	ENST00000592051	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.12	□□□□□ -0.31
CIRBP-236	ENST00000592051	RNF26	Q9BY78	433 aa	Predicted RBP	13.12	□□□□□ -0.31
CIRBP-236	ENST00000592051	CCPG1	Q9ULG6	757 aa		13.12	□□□□□ -0.31
CIRBP-236	ENST00000592051	STXBP3	O00186	592 aa		13.11	□□□□□ -0.31
CIRBP-236	ENST00000592051	NFIB	O00712	420 aa		13.11	□□□□□ -0.31
CIRBP-236	ENST00000592051	ECM2	O94769	699 aa	Predicted RBP	13.11	□□□□□ -0.31
CIRBP-236	ENST00000592051	HSPA1A	P0DMV8	641 aa	Known RBP	13.11	□□□□□ -0.31
CIRBP-236	ENST00000592051	HSPA1B	P0DMV9	641 aa	Known RBP	13.11	□□□□□ -0.31
CIRBP-236	ENST00000592051	ALAS1	P13196	640 aa		13.11	□□□□□ -0.31
CIRBP-236	ENST00000592051	SLC4A3	P48751	1232 aa		13.11	□□□□□ -0.31
CIRBP-236	ENST00000592051	LACTB	P83111	547 aa	Predicted RBP	13.11	□□□□□ -0.31
CIRBP-236	ENST00000592051	SP3	Q02447	781 aa		13.11	□□□□□ -0.31
CIRBP-236	ENST00000592051	SSRP1	Q08945	709 aa	Known RBP	13.11	□□□□□ -0.31
CIRBP-236	ENST00000592051	USH1G	Q495M9	461 aa		13.11	□□□□□ -0.31
CIRBP-236	ENST00000592051	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.11	□□□□□ -0.31
CIRBP-236	ENST00000592051	DDX11	Q96FC9	970 aa		13.11	□□□□□ -0.31
CIRBP-236	ENST00000592051	TRIM47	Q96LD4	638 aa		13.11	□□□□□ -0.31
CIRBP-236	ENST00000592051	LLPH	Q9BRT6	129 aa	Known RBP	13.11	□□□□□ -0.31
CIRBP-236	ENST00000592051	AMN	Q9BXJ7	453 aa		13.11	□□□□□ -0.31
CIRBP-236	ENST00000592051	HOMER2	Q9NSB8	354 aa		13.11	□□□□□ -0.31
CIRBP-236	ENST00000592051	GJB4	Q9NTQ9	266 aa		13.11	□□□□□ -0.31
CIRBP-236	ENST00000592051	RNF146	Q9NTX7	359 aa		13.11	□□□□□ -0.31
CIRBP-236	ENST00000592051	ORC3	Q9UBD5	711 aa	Predicted RBP	13.11	□□□□□ -0.31
CIRBP-236	ENST00000592051	PCDHA1	Q9Y5I3	950 aa		13.11	□□□□□ -0.31
CIRBP-236	ENST00000592051	STK36	Q9NRP7	1315 aa		13.11	□□□□□ -0.31
CIRBP-236	ENST00000592051	SLC25A27	O95847	323 aa		13.1	□□□□□ -0.31
CIRBP-236	ENST00000592051	SCG2	P13521	617 aa		13.1	□□□□□ -0.31
CIRBP-236	ENST00000592051	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.1	□□□□□ -0.31

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