RNA–Protein interactions for RNA: ENST00000591662.1

CNTNAP1-204, Transcript of contactin associated protein 1, humanhuman

TSL 1 (best)

Gene CNTNAP1, Length 4,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-204ENST00000591662 SMC6Q96SB8 1091 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 NHEJ1Q9H9Q4 299 aaPredicted RBP12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 FAM114A2Q9NRY5 505 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 TULP4Q9NRJ4 1543 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 KCNK3O14649 394 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 TBCAO75347 108 aaKnown RBP12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 HNRNPH1P31943 449 aaKnown RBP12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 IRAK1P51617 712 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 CCDC25Q86WR0 208 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 ARHGAP24Q8N264 748 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 MSL3Q8N5Y2 521 aaKnown RBP12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 TCP11Q8WWU5 503 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 PLIN2Q99541 437 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 CUEDC2Q9H467 287 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 HPCAL4Q9UM19 191 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 ADGRB3O60242 1522 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 F8W031 263 aaPredicted RBP12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 KRIT1O00522 736 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 TSPY3P0CV98 308 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 TSPY8P0CW00 308 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 CUL1Q13616 776 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 PARP9Q8IXQ6 854 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 ELOA2Q8IYF1 753 aaPredicted RBP12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 GBP7Q8N8V2 638 aaPredicted RBP12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 ARMC2Q8NEN0 867 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 KRT12Q99456 494 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 RNF26Q9BY78 433 aaPredicted RBP12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 PPP1R12CQ9BZL4 782 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 VPS54Q9P1Q0 977 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 FYB2Q5VWT5 728 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 UBL4BQ8N7F7 174 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 IL25Q9H293 177 aa12.13□□□□□ -0.47
CNTNAP1-204ENST00000591662 ITIH6Q6UXX5 1313 aa12.12□□□□□ -0.47
CNTNAP1-204ENST00000591662 SEPT2Q15019 361 aa12.12□□□□□ -0.47
CNTNAP1-204ENST00000591662 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.12□□□□□ -0.47
CNTNAP1-204ENST00000591662 TFCP2L1Q9NZI6 479 aa12.12□□□□□ -0.47
CNTNAP1-204ENST00000591662 USP32Q8NFA0 1604 aa12.12□□□□□ -0.47
CNTNAP1-204ENST00000591662 FRMD3A2A2Y4 597 aa12.12□□□□□ -0.47
CNTNAP1-204ENST00000591662 CETN3O15182 167 aa12.12□□□□□ -0.47
CNTNAP1-204ENST00000591662 DESP17661 470 aa12.12□□□□□ -0.47
CNTNAP1-204ENST00000591662 TRMT1LQ7Z2T5 733 aaKnown RBP12.12□□□□□ -0.47
CNTNAP1-204ENST00000591662 PAGE5Q96GU1 130 aa12.12□□□□□ -0.47
CNTNAP1-204ENST00000591662 INTS9Q9NV88 658 aaKnown RBP12.12□□□□□ -0.47
CNTNAP1-204ENST00000591662 PLEKHG2Q9H7P9 1386 aa12.12□□□□□ -0.47
CNTNAP1-204ENST00000591662 ZNF532Q9HCE3 1301 aa12.12□□□□□ -0.47
CNTNAP1-204ENST00000591662 ARAP3Q8WWN8 1544 aa12.12□□□□□ -0.47
CNTNAP1-204ENST00000591662 HOXA7P31268 230 aaPredicted RBP12.12□□□□□ -0.47
CNTNAP1-204ENST00000591662 LIFRP42702 1097 aa12.12□□□□□ -0.47
CNTNAP1-204ENST00000591662 NLRP14Q86W24 1093 aa12.12□□□□□ -0.47
CNTNAP1-204ENST00000591662 MB21D1Q8N884 522 aa12.12□□□□□ -0.47
CNTNAP1-204ENST00000591662 FAM89AQ96GI7 184 aa12.12□□□□□ -0.47
CNTNAP1-204ENST00000591662 MRPL44Q9H9J2 332 aaKnown RBP12.12□□□□□ -0.47
CNTNAP1-204ENST00000591662 STK38LQ9Y2H1 464 aa12.12□□□□□ -0.47
CNTNAP1-204ENST00000591662 IKBKGQ9Y6K9 419 aa12.12□□□□□ -0.47
CNTNAP1-204ENST00000591662 STK36Q9NRP7 1315 aa12.12□□□□□ -0.47
CNTNAP1-204ENST00000591662 GMNCA6NCL1 334 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 UBE3CQ15386 1083 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 FBXW10Q5XX13 1052 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.11□□□□□ -0.473e-9■■■■■ 80.2
CNTNAP1-204ENST00000591662 TRIM31Q9BZY9 425 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 EPN3Q9H201 632 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 SH2B2O14492 632 aaPredicted RBP12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 CTNND1O60716 968 aaKnown RBP12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 PPP1R37O75864 691 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 CIAO1O76071 339 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 TRAF1Q13077 416 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 PTGDRQ13258 359 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 SH2D4BQ5SQS7 431 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 CCNI2Q6ZMN8 369 aaPredicted RBP12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 GRAMD1CQ8IYS0 662 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 CDCA7Q9BWT1 371 aaPredicted RBP12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 IRX2Q9BZI1 471 aaPredicted RBP12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 RAB21Q9UL25 225 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 B4DLN1 442 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 KIF3CO14782 793 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 SMIM24O75264 130 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 NR1I3Q14994 352 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 SHC4Q6S5L8 630 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 ZNF804AQ7Z570 1209 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 CABP7Q86V35 215 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 CNOT6LQ96LI5 555 aaKnown RBP12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 LRWD1Q9UFC0 647 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 AMFRQ9UKV5 643 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 PLEKHG1Q9ULL1 1385 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 BUB1O43683 1085 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 RPS6KA5O75582 802 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 EXOSC10Q01780 885 aaKnown RBP12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 PLCB4Q15147 1175 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 TEX11Q8IYF3 940 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 DONSONQ9NYP3 566 aa12.11□□□□□ -0.47
CNTNAP1-204ENST00000591662 H3BQF6 201 aa12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 KCNQ3O43525 872 aa12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 SEMA3FQ13275 785 aa12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 MTF1Q14872 753 aa12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 MUM1Q2TAK8 710 aa12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 PBKQ96KB5 322 aa12.1□□□□□ -0.47
CNTNAP1-204ENST00000591662 RUNDC3BQ96NL0 473 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms