RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 FGBP02675 491 aa20.79■□□□□ 0.92
RETREG3-210ENST00000590541 SLC4A3P48751 1232 aa20.79■□□□□ 0.92
RETREG3-210ENST00000590541 NKX3-2P78367 333 aa20.79■□□□□ 0.92
RETREG3-210ENST00000590541 ARMCX2Q7L311 632 aa20.79■□□□□ 0.92
RETREG3-210ENST00000590541 CPXCR1Q8N123 301 aa20.79■□□□□ 0.92
RETREG3-210ENST00000590541 SLC43A3Q8NBI5 491 aa20.79■□□□□ 0.92
RETREG3-210ENST00000590541 SLC28A3Q9HAS3 691 aa20.79■□□□□ 0.92
RETREG3-210ENST00000590541 MYO9BQ13459 2157 aa20.79■□□□□ 0.92
RETREG3-210ENST00000590541 UMODL1Q5DID0 1318 aa20.78■□□□□ 0.92
RETREG3-210ENST00000590541 F5H6K3 240 aa20.78■□□□□ 0.92
RETREG3-210ENST00000590541 IFIT2P09913 472 aaKnown RBP20.78■□□□□ 0.92
RETREG3-210ENST00000590541 KLRC3Q07444 240 aa20.78■□□□□ 0.92
RETREG3-210ENST00000590541 RPAP2Q8IXW5 612 aaPredicted RBP20.78■□□□□ 0.92
RETREG3-210ENST00000590541 PRPF38AQ8NAV1 312 aaKnown RBP20.78■□□□□ 0.92
RETREG3-210ENST00000590541 NECAB3Q96P71 396 aaPredicted RBP20.78■□□□□ 0.92
RETREG3-210ENST00000590541 BOLA2Q9H3K6 86 aa20.78■□□□□ 0.92
RETREG3-210ENST00000590541 RAVER2Q9HCJ3 691 aaKnown RBP20.78■□□□□ 0.92
RETREG3-210ENST00000590541 SLC4A4Q9Y6R1 1079 aa20.78■□□□□ 0.92
RETREG3-210ENST00000590541 MCM3APO60318 1980 aa20.77■□□□□ 0.92
RETREG3-210ENST00000590541 NDUFB10O96000 172 aa20.77■□□□□ 0.92
RETREG3-210ENST00000590541 BEX3Q00994 111 aa20.77■□□□□ 0.92
RETREG3-210ENST00000590541 CCDC144CPQ8IYA2 1237 aa20.77■□□□□ 0.92
RETREG3-210ENST00000590541 ANKRD35Q8N283 1001 aa20.77■□□□□ 0.92
RETREG3-210ENST00000590541 IL27Q8NEV9 243 aa20.77■□□□□ 0.92
RETREG3-210ENST00000590541 FAM122AQ96E09 287 aa20.77■□□□□ 0.92
RETREG3-210ENST00000590541 KIF1BPQ96EK5 621 aa20.77■□□□□ 0.92
RETREG3-210ENST00000590541 DDRGK1Q96HY6 314 aa20.77■□□□□ 0.92
RETREG3-210ENST00000590541 MTIF3Q9H2K0 278 aaKnown RBP20.77■□□□□ 0.92
RETREG3-210ENST00000590541 HIPK3Q9H422 1215 aa20.77■□□□□ 0.92
RETREG3-210ENST00000590541 NYAP2Q9P242 653 aa20.77■□□□□ 0.92
RETREG3-210ENST00000590541 CHD7Q9P2D1 2997 aa20.77■□□□□ 0.92
RETREG3-210ENST00000590541 ASTN1O14525 1302 aa20.77■□□□□ 0.91
RETREG3-210ENST00000590541 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.76■□□□□ 0.91
RETREG3-210ENST00000590541 ZBED4O75132 1171 aa20.76■□□□□ 0.91
RETREG3-210ENST00000590541 HMMRO75330 724 aa20.76■□□□□ 0.91
RETREG3-210ENST00000590541 BMP1P13497 986 aa20.76■□□□□ 0.91
RETREG3-210ENST00000590541 RASA1P20936 1047 aa20.76■□□□□ 0.91
RETREG3-210ENST00000590541 UBE3CQ15386 1083 aa20.76■□□□□ 0.91
RETREG3-210ENST00000590541 OTOP2Q7RTS6 562 aa20.76■□□□□ 0.91
RETREG3-210ENST00000590541 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.76■□□□□ 0.91
RETREG3-210ENST00000590541 SLC38A10Q9HBR0 1119 aa20.76■□□□□ 0.91
RETREG3-210ENST00000590541 RABGGTBP53611 331 aa20.75■□□□□ 0.91
RETREG3-210ENST00000590541 CXCL17Q6UXB2 119 aa20.75■□□□□ 0.91
RETREG3-210ENST00000590541 PUS7LQ9H0K6 701 aaKnown RBP20.75■□□□□ 0.91
RETREG3-210ENST00000590541 ARPP21Q9UBL0 812 aaPredicted RBP20.75■□□□□ 0.91
RETREG3-210ENST00000590541 GRIN2DO15399 1336 aa20.75■□□□□ 0.91
RETREG3-210ENST00000590541 XIRP2A4UGR9 3374 aa20.74■□□□□ 0.91
RETREG3-210ENST00000590541 MYOGP15173 224 aa20.74■□□□□ 0.91
RETREG3-210ENST00000590541 ATP5JP18859 108 aa20.74■□□□□ 0.91
RETREG3-210ENST00000590541 CCL23P55773 120 aa20.74■□□□□ 0.91
RETREG3-210ENST00000590541 CNTN2Q02246 1040 aa20.74■□□□□ 0.91
RETREG3-210ENST00000590541 TFF2Q03403 129 aa20.74■□□□□ 0.91
RETREG3-210ENST00000590541 CHST13Q8NET6 341 aa20.74■□□□□ 0.91
RETREG3-210ENST00000590541 KIFC2Q96AC6 838 aa20.74■□□□□ 0.91
RETREG3-210ENST00000590541 VWCEQ96DN2 955 aa20.74■□□□□ 0.91
RETREG3-210ENST00000590541 HAUS7Q99871 368 aa20.74■□□□□ 0.91
RETREG3-210ENST00000590541 BCL11AQ9H165 835 aa20.74■□□□□ 0.91
RETREG3-210ENST00000590541 WNT8AQ9H1J5 351 aa20.74■□□□□ 0.91
RETREG3-210ENST00000590541 TSPYL2Q9H2G4 693 aaPredicted RBP20.74■□□□□ 0.91
RETREG3-210ENST00000590541 ZBTB40Q9NUA8 1239 aa20.74■□□□□ 0.91
RETREG3-210ENST00000590541 FBXO40Q9UH90 709 aa20.74■□□□□ 0.91
RETREG3-210ENST00000590541 GNEQ9Y223 722 aaKnown RBP20.74■□□□□ 0.91
RETREG3-210ENST00000590541 TCF20Q9UGU0 1960 aaKnown RBP20.74■□□□□ 0.91
RETREG3-210ENST00000590541 REV3LO60673 3130 aa20.73■□□□□ 0.91
RETREG3-210ENST00000590541 TNFAIP2Q03169 654 aa20.73■□□□□ 0.91
RETREG3-210ENST00000590541 ITGA7Q13683 1181 aa20.73■□□□□ 0.91
RETREG3-210ENST00000590541 PPP2R2DQ66LE6 453 aa20.73■□□□□ 0.91
RETREG3-210ENST00000590541 NOC4LQ9BVI4 516 aaKnown RBP20.73■□□□□ 0.91
RETREG3-210ENST00000590541 CLIP2Q9UDT6 1046 aa20.73■□□□□ 0.91
RETREG3-210ENST00000590541 COG6Q9Y2V7 657 aa20.73■□□□□ 0.91
RETREG3-210ENST00000590541 CTDP1Q9Y5B0 961 aaPredicted RBP20.73■□□□□ 0.91
RETREG3-210ENST00000590541 NCOR1O75376 2440 aa20.73■□□□□ 0.91
RETREG3-210ENST00000590541 BDP1A6H8Y1 2624 aa20.72■□□□□ 0.91
RETREG3-210ENST00000590541 IGKV6D-41A0A0C4DH26 115 aa20.72■□□□□ 0.91
RETREG3-210ENST00000590541 CABYRO75952 493 aa20.72■□□□□ 0.91
RETREG3-210ENST00000590541 PTGS1P23219 599 aa20.72■□□□□ 0.91
RETREG3-210ENST00000590541 SBK1Q52WX2 424 aa20.72■□□□□ 0.91
RETREG3-210ENST00000590541 STK11IPQ8N1F8 1099 aa20.72■□□□□ 0.91
RETREG3-210ENST00000590541 MICALL1Q8N3F8 863 aa20.72■□□□□ 0.91
RETREG3-210ENST00000590541 FAM133AQ8N9E0 248 aa20.72■□□□□ 0.91
RETREG3-210ENST00000590541 C1QTNF1Q9BXJ1 281 aa20.72■□□□□ 0.91
RETREG3-210ENST00000590541 TRPV6Q9H1D0 765 aa20.72■□□□□ 0.91
RETREG3-210ENST00000590541 MYH7P12883 1935 aa20.71■□□□□ 0.91
RETREG3-210ENST00000590541 B4GALT4O60513 344 aa20.71■□□□□ 0.91
RETREG3-210ENST00000590541 KCNQ1P51787 676 aa20.71■□□□□ 0.91
RETREG3-210ENST00000590541 OAZ1P54368 228 aa20.71■□□□□ 0.91
RETREG3-210ENST00000590541 TLK2Q86UE8 772 aa20.71■□□□□ 0.91
RETREG3-210ENST00000590541 MKNK2Q9HBH9 465 aa20.71■□□□□ 0.91
RETREG3-210ENST00000590541 FEM1BQ9UK73 627 aa20.71■□□□□ 0.91
RETREG3-210ENST00000590541 PCDHA11Q9Y5I1 949 aa20.71■□□□□ 0.91
RETREG3-210ENST00000590541 SLC4A7Q9Y6M7 1214 aa20.71■□□□□ 0.91
RETREG3-210ENST00000590541 SOWAHBA6NEL2 793 aa20.7■□□□□ 0.9
RETREG3-210ENST00000590541 HOXD11P31277 338 aaPredicted RBP20.7■□□□□ 0.9
RETREG3-210ENST00000590541 FSCN1Q16658 493 aaKnown RBP20.7■□□□□ 0.9
RETREG3-210ENST00000590541 NOL8Q76FK4 1167 aaKnown RBP20.7■□□□□ 0.9
RETREG3-210ENST00000590541 SIRT2Q8IXJ6 389 aa20.7■□□□□ 0.9
RETREG3-210ENST00000590541 MKL1Q969V6 931 aa20.7■□□□□ 0.9
RETREG3-210ENST00000590541 STRBPQ96SI9 672 aaKnown RBP20.7■□□□□ 0.9
RETREG3-210ENST00000590541 HOMER2Q9NSB8 354 aa20.7■□□□□ 0.9
RETREG3-210ENST00000590541 GSG1L2A8MUP6 293 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms