RNA–Protein interactions for RNA: ENST00000589663.5

BECN1-212, Transcript of beclin 1, humanhuman

TSL 3

Gene BECN1, Length 489 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-212ENST00000589663 C10orf71Q711Q0 1435 aa11.33□□□□□ -0.6
BECN1-212ENST00000589663 USP17L3A6NCW0 530 aa11.32□□□□□ -0.6
BECN1-212ENST00000589663 USP17L4A6NCW7 530 aa11.32□□□□□ -0.6
BECN1-212ENST00000589663 hCG_1984214I3L0E3 225 aa11.32□□□□□ -0.6
BECN1-212ENST00000589663 MYO1BO43795 1136 aa11.32□□□□□ -0.6
BECN1-212ENST00000589663 PARP1P09874 1014 aaKnown RBP11.32□□□□□ -0.6
BECN1-212ENST00000589663 RFX1P22670 979 aa11.32□□□□□ -0.6
BECN1-212ENST00000589663 SMARCA1P28370 1054 aa11.32□□□□□ -0.6
BECN1-212ENST00000589663 TOB1P50616 345 aaPredicted RBP11.32□□□□□ -0.6
BECN1-212ENST00000589663 PLCD1P51178 756 aa11.32□□□□□ -0.6
BECN1-212ENST00000589663 USP46P62068 366 aa11.32□□□□□ -0.6
BECN1-212ENST00000589663 PICALMQ13492 652 aa11.32□□□□□ -0.6
BECN1-212ENST00000589663 GRIPAP1Q4V328 841 aa11.32□□□□□ -0.6
BECN1-212ENST00000589663 SOGA3Q5TF21 947 aa11.32□□□□□ -0.6
BECN1-212ENST00000589663 USP17L1Q7RTZ2 530 aa11.32□□□□□ -0.6
BECN1-212ENST00000589663 PLA2G4DQ86XP0 818 aa11.32□□□□□ -0.6
BECN1-212ENST00000589663 BLIDQ8IZY5 108 aa11.32□□□□□ -0.6
BECN1-212ENST00000589663 AOPEPQ8N6M6 819 aa11.32□□□□□ -0.6
BECN1-212ENST00000589663 ZNF713Q8N859 430 aaPredicted RBP11.32□□□□□ -0.6
BECN1-212ENST00000589663 TMEM47Q9BQJ4 181 aa11.32□□□□□ -0.6
BECN1-212ENST00000589663 SPZ1Q9BXG8 430 aa11.32□□□□□ -0.6
BECN1-212ENST00000589663 IL17RBQ9NRM6 502 aa11.32□□□□□ -0.6
BECN1-212ENST00000589663 USP40Q9NVE5 1235 aa11.32□□□□□ -0.6
BECN1-212ENST00000589663 PCDHB6Q9Y5E3 794 aa11.32□□□□□ -0.6
BECN1-212ENST00000589663 CCDC194A0A1B0GVG4 234 aa11.31□□□□□ -0.6
BECN1-212ENST00000589663 hCG_1642624A0A1W2PR95 340 aa11.31□□□□□ -0.6
BECN1-212ENST00000589663 F8W031 263 aaPredicted RBP11.31□□□□□ -0.6
BECN1-212ENST00000589663 POTEB2H3BUK9 544 aa11.31□□□□□ -0.6
BECN1-212ENST00000589663 SMC2O95347 1197 aa11.31□□□□□ -0.6
BECN1-212ENST00000589663 SLC10A3P09131 477 aa11.31□□□□□ -0.6
BECN1-212ENST00000589663 TXLNAP40222 546 aa11.31□□□□□ -0.6
BECN1-212ENST00000589663 HDLBPQ00341 1268 aaKnown RBP11.31□□□□□ -0.6
BECN1-212ENST00000589663 SF3B2Q13435 895 aaKnown RBP11.31□□□□□ -0.6
BECN1-212ENST00000589663 SLC15A2Q16348 729 aa11.31□□□□□ -0.6
BECN1-212ENST00000589663 SPC24Q8NBT2 197 aa11.31□□□□□ -0.6
BECN1-212ENST00000589663 DAGLBQ8NCG7 672 aa11.31□□□□□ -0.6
BECN1-212ENST00000589663 SLC44A5Q8NCS7 719 aa11.31□□□□□ -0.6
BECN1-212ENST00000589663 RRP36Q96EU6 259 aaKnown RBP11.31□□□□□ -0.6
BECN1-212ENST00000589663 MRFAP1L1Q96HT8 127 aa11.31□□□□□ -0.6
BECN1-212ENST00000589663 CLIC6Q96NY7 704 aa11.31□□□□□ -0.6
BECN1-212ENST00000589663 TRIM34Q9BYJ4 488 aa11.31□□□□□ -0.6
BECN1-212ENST00000589663 MAD2L2Q9UI95 211 aa11.31□□□□□ -0.6
BECN1-212ENST00000589663 TUBE1Q9UJT0 475 aa11.31□□□□□ -0.6
BECN1-212ENST00000589663 PCDHA4Q9UN74 947 aa11.31□□□□□ -0.6
BECN1-212ENST00000589663 SLX4Q8IY92 1834 aa11.3□□□□□ -0.6
BECN1-212ENST00000589663 PALM3A6NDB9 673 aaPredicted RBP11.3□□□□□ -0.6
BECN1-212ENST00000589663 KLRF2D3W0D1 207 aa11.3□□□□□ -0.6
BECN1-212ENST00000589663 IKBKBO14920 756 aa11.3□□□□□ -0.6
BECN1-212ENST00000589663 CBFA2T2O43439 604 aa11.3□□□□□ -0.6
BECN1-212ENST00000589663 NRDCO43847 1150 aa11.3□□□□□ -0.6
BECN1-212ENST00000589663 NEMFO60524 1076 aa11.3□□□□□ -0.6
BECN1-212ENST00000589663 ASPRV1Q53RT3 343 aa11.3□□□□□ -0.6
BECN1-212ENST00000589663 SWT1Q5T5J6 900 aaKnown RBP11.3□□□□□ -0.6
BECN1-212ENST00000589663 STRIP1Q5VSL9 837 aa11.3□□□□□ -0.6
BECN1-212ENST00000589663 TRIML1Q8N9V2 468 aa11.3□□□□□ -0.6
BECN1-212ENST00000589663 PIBF1Q8WXW3 757 aa11.3□□□□□ -0.6
BECN1-212ENST00000589663 SMARCE1Q969G3 411 aa11.3□□□□□ -0.6
BECN1-212ENST00000589663 CCDC17Q96LX7 622 aa11.3□□□□□ -0.6
BECN1-212ENST00000589663 MRIQ9BWK5 157 aa11.3□□□□□ -0.6
BECN1-212ENST00000589663 OSBPL5Q9H0X9 879 aaPredicted RBP11.3□□□□□ -0.6
BECN1-212ENST00000589663 C6orf50Q9HD87 102 aa11.3□□□□□ -0.6
BECN1-212ENST00000589663 CLIP2Q9UDT6 1046 aa11.3□□□□□ -0.6
BECN1-212ENST00000589663 SERPINB13Q9UIV8 391 aa11.3□□□□□ -0.6
BECN1-212ENST00000589663 MYH4Q9Y623 1939 aa11.3□□□□□ -0.6
BECN1-212ENST00000589663 BIN1O00499 593 aa11.29□□□□□ -0.6
BECN1-212ENST00000589663 AP5Z1O43299 807 aa11.29□□□□□ -0.6
BECN1-212ENST00000589663 ECE2O60344 883 aa11.29□□□□□ -0.6
BECN1-212ENST00000589663 GNA11P29992 359 aa11.29□□□□□ -0.6
BECN1-212ENST00000589663 CRKP46108 304 aa11.29□□□□□ -0.6
BECN1-212ENST00000589663 NAPAP54920 295 aa11.29□□□□□ -0.6
BECN1-212ENST00000589663 ATP2C1P98194 919 aaPredicted RBP11.29□□□□□ -0.6
BECN1-212ENST00000589663 VAC14Q08AM6 782 aa11.29□□□□□ -0.6
BECN1-212ENST00000589663 POSTNQ15063 836 aa11.29□□□□□ -0.6
BECN1-212ENST00000589663 ARL6IP4Q66PJ3 421 aaKnown RBP11.29□□□□□ -0.6
BECN1-212ENST00000589663 PIK3AP1Q6ZUJ8 805 aa11.29□□□□□ -0.6
BECN1-212ENST00000589663 KRT25Q7Z3Z0 450 aa11.29□□□□□ -0.6
BECN1-212ENST00000589663 HEATR3Q7Z4Q2 680 aa11.29□□□□□ -0.6
BECN1-212ENST00000589663 DHX40Q8IX18 779 aaKnown RBP11.29□□□□□ -0.6
BECN1-212ENST00000589663 LRRN4Q8WUT4 740 aa11.29□□□□□ -0.6
BECN1-212ENST00000589663 TNFRSF25Q93038 417 aa11.29□□□□□ -0.6
BECN1-212ENST00000589663 NAP1L5Q96NT1 182 aaPredicted RBP11.29□□□□□ -0.6
BECN1-212ENST00000589663 CSRNP2Q9H175 543 aa11.29□□□□□ -0.6
BECN1-212ENST00000589663 EHD4Q9H223 541 aa11.29□□□□□ -0.6
BECN1-212ENST00000589663 DHX36Q9H2U1 1008 aaKnown RBP11.29□□□□□ -0.6
BECN1-212ENST00000589663 BARHL2Q9NY43 387 aa11.29□□□□□ -0.6
BECN1-212ENST00000589663 MTMR7Q9Y216 660 aa11.29□□□□□ -0.6
BECN1-212ENST00000589663 PSME4Q14997 1843 aa11.29□□□□□ -0.6
BECN1-212ENST00000589663 BAZ2BQ9UIF8 2168 aaKnown RBP11.28□□□□□ -0.6
BECN1-212ENST00000589663 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.28□□□□□ -0.6
BECN1-212ENST00000589663 POLR2DO15514 142 aaKnown RBP11.28□□□□□ -0.6
BECN1-212ENST00000589663 GPR37L1O60883 481 aa11.28□□□□□ -0.6
BECN1-212ENST00000589663 OFD1O75665 1012 aa11.28□□□□□ -0.6
BECN1-212ENST00000589663 LONP1P36776 959 aaKnown RBP11.28□□□□□ -0.6
BECN1-212ENST00000589663 BAG6P46379 1132 aa11.28□□□□□ -0.6
BECN1-212ENST00000589663 SCNN1DP51172 638 aa11.28□□□□□ -0.6
BECN1-212ENST00000589663 RBM5P52756 815 aaKnown RBP eCLIP11.28□□□□□ -0.6
BECN1-212ENST00000589663 GSDMDP57764 484 aa11.28□□□□□ -0.6
BECN1-212ENST00000589663 MYL5Q02045 173 aa11.28□□□□□ -0.6
BECN1-212ENST00000589663 ORC2Q13416 577 aaPredicted RBP11.28□□□□□ -0.6
BECN1-212ENST00000589663 PNOCQ13519 176 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms