RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 EEF2P13639 858 aaKnown RBP11.78□□□□□ -0.52
VPS25-203ENST00000589520 SLC1A4P43007 532 aa11.78□□□□□ -0.52
VPS25-203ENST00000589520 GRIN1Q05586 938 aa11.78□□□□□ -0.52
VPS25-203ENST00000589520 TCP10Q12799 353 aa11.78□□□□□ -0.52
VPS25-203ENST00000589520 TNIP1Q15025 636 aa11.78□□□□□ -0.52
VPS25-203ENST00000589520 DALRD3Q5D0E6 543 aaKnown RBP11.78□□□□□ -0.52
VPS25-203ENST00000589520 SPECC1Q5M775 1068 aa11.78□□□□□ -0.52
VPS25-203ENST00000589520 SLFN13Q68D06 897 aa11.78□□□□□ -0.52
VPS25-203ENST00000589520 FAM83AQ86UY5 434 aa11.78□□□□□ -0.52
VPS25-203ENST00000589520 HOMER1Q86YM7 354 aa11.78□□□□□ -0.52
VPS25-203ENST00000589520 ADGRF4Q8IZF3 695 aa11.78□□□□□ -0.52
VPS25-203ENST00000589520 TNS4Q8IZW8 715 aa11.78□□□□□ -0.52
VPS25-203ENST00000589520 LRRC47Q8N1G4 583 aaKnown RBP11.78□□□□□ -0.52
VPS25-203ENST00000589520 GMCL1Q96IK5 515 aa11.78□□□□□ -0.52
VPS25-203ENST00000589520 PRMT6Q96LA8 375 aaPredicted RBP11.78□□□□□ -0.52
VPS25-203ENST00000589520 SYT17Q9BSW7 474 aa11.78□□□□□ -0.52
VPS25-203ENST00000589520 UBA5Q9GZZ9 404 aa11.78□□□□□ -0.52
VPS25-203ENST00000589520 TDRD3Q9H7E2 651 aaKnown RBP11.78□□□□□ -0.52
VPS25-203ENST00000589520 JMJD4Q9H9V9 463 aa11.78□□□□□ -0.52
VPS25-203ENST00000589520 GINM1Q9NU53 330 aa11.78□□□□□ -0.52
VPS25-203ENST00000589520 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.78□□□□□ -0.52
VPS25-203ENST00000589520 MAN1B1Q9UKM7 699 aa11.78□□□□□ -0.52
VPS25-203ENST00000589520 MTMR7Q9Y216 660 aa11.78□□□□□ -0.52
VPS25-203ENST00000589520 PSMD14O00487 310 aa11.77□□□□□ -0.53
VPS25-203ENST00000589520 BIN1O00499 593 aa11.77□□□□□ -0.53
VPS25-203ENST00000589520 NRDCO43847 1150 aa11.77□□□□□ -0.53
VPS25-203ENST00000589520 OFD1O75665 1012 aa11.77□□□□□ -0.53
VPS25-203ENST00000589520 OR52Z1P0C646 297 aa11.77□□□□□ -0.53
VPS25-203ENST00000589520 GCFC2P16383 781 aaKnown RBP11.77□□□□□ -0.53
VPS25-203ENST00000589520 RPS12P25398 132 aaKnown RBP11.77□□□□□ -0.53
VPS25-203ENST00000589520 UBA7P41226 1012 aa11.77□□□□□ -0.53
VPS25-203ENST00000589520 TNNI2P48788 182 aa11.77□□□□□ -0.53
VPS25-203ENST00000589520 TERF1P54274 439 aa11.77□□□□□ -0.53
VPS25-203ENST00000589520 ICA1Q05084 483 aa11.77□□□□□ -0.53
VPS25-203ENST00000589520 NCAPHQ15003 741 aa11.77□□□□□ -0.53
VPS25-203ENST00000589520 INF2Q27J81 1249 aa11.77□□□□□ -0.53
VPS25-203ENST00000589520 CCDC96Q2M329 555 aa11.77□□□□□ -0.53
VPS25-203ENST00000589520 SPDYE2Q495Y8 402 aa11.77□□□□□ -0.53
VPS25-203ENST00000589520 SH3BP5LQ7L8J4 393 aa11.77□□□□□ -0.53
VPS25-203ENST00000589520 ZFPM1Q8IX07 1006 aa11.77□□□□□ -0.53
VPS25-203ENST00000589520 JDP2Q8WYK2 163 aa11.77□□□□□ -0.53
VPS25-203ENST00000589520 CUL5Q93034 780 aa11.77□□□□□ -0.53
VPS25-203ENST00000589520 DHX58Q96C10 678 aa11.77□□□□□ -0.53
VPS25-203ENST00000589520 EPSTI1Q96J88 318 aa11.77□□□□□ -0.53
VPS25-203ENST00000589520 RAB34Q9BZG1 259 aa11.77□□□□□ -0.53
VPS25-203ENST00000589520 DNAJC18Q9H819 358 aa11.77□□□□□ -0.53
VPS25-203ENST00000589520 GPCPD1Q9NPB8 672 aa11.77□□□□□ -0.53
VPS25-203ENST00000589520 ZNF70Q9UC06 446 aaPredicted RBP11.77□□□□□ -0.53
VPS25-203ENST00000589520 PPP1R2P41236 205 aa11.76□□□□□ -0.53
VPS25-203ENST00000589520 PTGER2P43116 358 aa11.76□□□□□ -0.53
VPS25-203ENST00000589520 AMPD3Q01432 767 aa11.76□□□□□ -0.53
VPS25-203ENST00000589520 ATP2B2Q01814 1243 aa11.76□□□□□ -0.53
VPS25-203ENST00000589520 DPYDQ12882 1025 aa11.76□□□□□ -0.53
VPS25-203ENST00000589520 PDIA5Q14554 519 aa11.76□□□□□ -0.53
VPS25-203ENST00000589520 E2F4Q16254 413 aa11.76□□□□□ -0.53
VPS25-203ENST00000589520 CIAPIN1Q6FI81 312 aa11.76□□□□□ -0.53
VPS25-203ENST00000589520 PPP4R3AQ6IN85 833 aa11.76□□□□□ -0.53
VPS25-203ENST00000589520 BTNL9Q6UXG8 535 aa11.76□□□□□ -0.53
VPS25-203ENST00000589520 CCDC186Q7Z3E2 898 aa11.76□□□□□ -0.53
VPS25-203ENST00000589520 PDILTQ8N807 584 aa11.76□□□□□ -0.53
VPS25-203ENST00000589520 TBCKQ8TEA7 893 aa11.76□□□□□ -0.53
VPS25-203ENST00000589520 ERCC4Q92889 916 aaPredicted RBP11.76□□□□□ -0.53
VPS25-203ENST00000589520 CCDC47Q96A33 483 aaKnown RBP11.76□□□□□ -0.53
VPS25-203ENST00000589520 CSRNP1Q96S65 589 aa11.76□□□□□ -0.53
VPS25-203ENST00000589520 LRRC27Q9C0I9 530 aa11.76□□□□□ -0.53
VPS25-203ENST00000589520 SH2D4AQ9H788 454 aa11.76□□□□□ -0.53
VPS25-203ENST00000589520 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.76□□□□□ -0.537e-9■■■■□ 23.2
VPS25-203ENST00000589520 ARHGEF10LQ9HCE6 1279 aa11.76□□□□□ -0.53
VPS25-203ENST00000589520 RTN4Q9NQC3 1192 aaKnown RBP11.76□□□□□ -0.53
VPS25-203ENST00000589520 ATF5Q9Y2D1 282 aaPredicted RBP11.76□□□□□ -0.53
VPS25-203ENST00000589520 CD2APQ9Y5K6 639 aa11.76□□□□□ -0.53
VPS25-203ENST00000589520 FRMPD2Q68DX3 1309 aaPredicted RBP11.76□□□□□ -0.53
VPS25-203ENST00000589520 F5H6K3 240 aa11.75□□□□□ -0.53
VPS25-203ENST00000589520 CCNT1O60563 726 aaKnown RBP11.75□□□□□ -0.53
VPS25-203ENST00000589520 FOSP01100 380 aaPredicted RBP11.75□□□□□ -0.53
VPS25-203ENST00000589520 USP11P51784 963 aa11.75□□□□□ -0.53
VPS25-203ENST00000589520 EIF6P56537 245 aaKnown RBP11.75□□□□□ -0.53
VPS25-203ENST00000589520 MAP3K10Q02779 954 aa11.75□□□□□ -0.53
VPS25-203ENST00000589520 KLRC3Q07444 240 aa11.75□□□□□ -0.53
VPS25-203ENST00000589520 AP3B2Q13367 1082 aa11.75□□□□□ -0.53
VPS25-203ENST00000589520 TMEM266Q2M3C6 531 aa11.75□□□□□ -0.53
VPS25-203ENST00000589520 LETM2Q2VYF4 491 aa11.75□□□□□ -0.53
VPS25-203ENST00000589520 NOM1Q5C9Z4 860 aaKnown RBP11.75□□□□□ -0.53
VPS25-203ENST00000589520 RRAGBQ5VZM2 374 aa11.75□□□□□ -0.53
VPS25-203ENST00000589520 USP49Q70CQ1 688 aa11.75□□□□□ -0.53
VPS25-203ENST00000589520 SPC24Q8NBT2 197 aa11.75□□□□□ -0.53
VPS25-203ENST00000589520 RASGRP4Q8TDF6 673 aa11.75□□□□□ -0.53
VPS25-203ENST00000589520 TAOK3Q9H2K8 898 aa11.75□□□□□ -0.53
VPS25-203ENST00000589520 PSTPIP2Q9H939 334 aa11.75□□□□□ -0.53
VPS25-203ENST00000589520 DISC1Q9NRI5 854 aa11.75□□□□□ -0.53
VPS25-203ENST00000589520 ZNF277Q9NRM2 450 aaPredicted RBP11.75□□□□□ -0.53
VPS25-203ENST00000589520 STK24Q9Y6E0 443 aa11.75□□□□□ -0.53
VPS25-203ENST00000589520 GREB1LQ9C091 1923 aaPredicted RBP11.74□□□□□ -0.53
VPS25-203ENST00000589520 WNT7AO00755 349 aa11.74□□□□□ -0.53
VPS25-203ENST00000589520 PLA2G6O60733 806 aa11.74□□□□□ -0.53
VPS25-203ENST00000589520 RAD17O75943 681 aa11.74□□□□□ -0.53
VPS25-203ENST00000589520 BMP3P12645 472 aa11.74□□□□□ -0.53
VPS25-203ENST00000589520 STAT6P42226 847 aa11.74□□□□□ -0.53
VPS25-203ENST00000589520 CLK2P49760 499 aaKnown RBP11.74□□□□□ -0.53
VPS25-203ENST00000589520 FXR2P51116 673 aaKnown RBP eCLIP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms