RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 ZNF543Q08ER8 600 aa22.38■■□□□ 1.17
TPM4-204ENST00000586499 GOLGA8HP0CJ92 632 aa22.37■■□□□ 1.17
TPM4-204ENST00000586499 SNHG28P0DPA3 235 aa22.37■■□□□ 1.17
TPM4-204ENST00000586499 SYDE2Q5VT97 1194 aa22.37■■□□□ 1.17
TPM4-204ENST00000586499 CYB5R4Q7L1T6 521 aa22.37■■□□□ 1.17
TPM4-204ENST00000586499 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.37■■□□□ 1.173e-7■□□□□ 8.7
TPM4-204ENST00000586499 ENAHQ8N8S7 591 aaPredicted RBP22.37■■□□□ 1.17
TPM4-204ENST00000586499 ANKS1AQ92625 1134 aa22.37■■□□□ 1.17
TPM4-204ENST00000586499 TRERF1Q96PN7 1200 aa22.37■■□□□ 1.17
TPM4-204ENST00000586499 C11orf49Q9H6J7 331 aa22.37■■□□□ 1.17
TPM4-204ENST00000586499 CNNM2Q9H8M5 875 aa22.37■■□□□ 1.17
TPM4-204ENST00000586499 RNF146Q9NTX7 359 aa22.37■■□□□ 1.17
TPM4-204ENST00000586499 FBXO40Q9UH90 709 aa22.37■■□□□ 1.17
TPM4-204ENST00000586499 TNKSO95271 1327 aa22.36■■□□□ 1.17
TPM4-204ENST00000586499 MUM1L1Q5H9M0 696 aa22.36■■□□□ 1.17
TPM4-204ENST00000586499 PNMA1Q8ND90 353 aa22.36■■□□□ 1.17
TPM4-204ENST00000586499 FGD4Q96M96 766 aa22.36■■□□□ 1.17
TPM4-204ENST00000586499 RANBP17Q9H2T7 1088 aaKnown RBP22.36■■□□□ 1.17
TPM4-204ENST00000586499 CPVLQ9H3G5 476 aa22.36■■□□□ 1.17
TPM4-204ENST00000586499 ACAD9Q9H845 621 aa22.36■■□□□ 1.17
TPM4-204ENST00000586499 U3KPZ7 1027 aaPredicted RBP22.36■■□□□ 1.17
TPM4-204ENST00000586499 FRMPD3Q5JV73 1810 aa22.36■■□□□ 1.17
TPM4-204ENST00000586499 PFASO15067 1338 aa22.35■■□□□ 1.17
TPM4-204ENST00000586499 SEPT4O43236 478 aa22.35■■□□□ 1.17
TPM4-204ENST00000586499 MSCO60682 206 aa22.35■■□□□ 1.17
TPM4-204ENST00000586499 NT5C2P49902 561 aa22.35■■□□□ 1.17
TPM4-204ENST00000586499 CCDC178Q5BJE1 867 aa22.35■■□□□ 1.17
TPM4-204ENST00000586499 MAP4K1Q92918 833 aa22.35■■□□□ 1.17
TPM4-204ENST00000586499 CCDC136Q96JN2 1154 aa22.35■■□□□ 1.17
TPM4-204ENST00000586499 KAT14Q9H8E8 782 aa22.35■■□□□ 1.17
TPM4-204ENST00000586499 CCPG1Q9ULG6 757 aa22.35■■□□□ 1.17
TPM4-204ENST00000586499 SNAI1O95863 264 aaPredicted RBP22.34■■□□□ 1.17
TPM4-204ENST00000586499 ZNF865P0CJ78 1059 aaPredicted RBP22.34■■□□□ 1.17
TPM4-204ENST00000586499 COL6A1P12109 1028 aa22.34■■□□□ 1.17
TPM4-204ENST00000586499 CNTN2Q02246 1040 aa22.34■■□□□ 1.17
TPM4-204ENST00000586499 UBAC1Q9BSL1 405 aa22.34■■□□□ 1.17
TPM4-204ENST00000586499 UBA5Q9GZZ9 404 aa22.34■■□□□ 1.17
TPM4-204ENST00000586499 A1CFQ9NQ94 594 aaKnown RBP22.34■■□□□ 1.17
TPM4-204ENST00000586499 RBM8AQ9Y5S9 174 aaKnown RBP22.34■■□□□ 1.17
TPM4-204ENST00000586499 SMCHD1A6NHR9 2005 aa22.34■■□□□ 1.17
TPM4-204ENST00000586499 ALPK3Q96L96 1907 aa22.33■■□□□ 1.17
TPM4-204ENST00000586499 E7EWF7 191 aa22.33■■□□□ 1.17
TPM4-204ENST00000586499 EVI5O60447 810 aa22.33■■□□□ 1.17
TPM4-204ENST00000586499 ICAM1P05362 532 aa22.33■■□□□ 1.17
TPM4-204ENST00000586499 TKFCQ3LXA3 575 aa22.33■■□□□ 1.17
TPM4-204ENST00000586499 GJC2Q5T442 439 aaPredicted RBP22.33■■□□□ 1.17
TPM4-204ENST00000586499 STOX1Q6ZVD7 989 aa22.33■■□□□ 1.17
TPM4-204ENST00000586499 ESYT1Q9BSJ8 1104 aa22.33■■□□□ 1.17
TPM4-204ENST00000586499 TRDNQ13061 729 aa22.32■■□□□ 1.16
TPM4-204ENST00000586499 SEC23AQ15436 765 aa22.32■■□□□ 1.16
TPM4-204ENST00000586499 BMP2KLQ5H9B9 411 aa22.32■■□□□ 1.16
TPM4-204ENST00000586499 MAMDC4Q6UXC1 1216 aa22.32■■□□□ 1.16
TPM4-204ENST00000586499 CHST3Q7LGC8 479 aa22.32■■□□□ 1.16
TPM4-204ENST00000586499 LSG1Q9H089 658 aaKnown RBP22.32■■□□□ 1.16
TPM4-204ENST00000586499 NRBP1Q9UHY1 535 aa22.32■■□□□ 1.16
TPM4-204ENST00000586499 CEP290O15078 2479 aa22.31■■□□□ 1.16
TPM4-204ENST00000586499 SOWAHBA6NEL2 793 aa22.31■■□□□ 1.16
TPM4-204ENST00000586499 POTEB2H3BUK9 544 aa22.31■■□□□ 1.16
TPM4-204ENST00000586499 MYCNP04198 464 aaPredicted RBP22.31■■□□□ 1.16
TPM4-204ENST00000586499 GPATCH4Q5T3I0 446 aaKnown RBP22.31■■□□□ 1.16
TPM4-204ENST00000586499 IFIT1BQ5T764 474 aaKnown RBP22.31■■□□□ 1.16
TPM4-204ENST00000586499 KIAA1211Q6ZU35 1233 aa22.31■■□□□ 1.16
TPM4-204ENST00000586499 ZNF467Q7Z7K2 595 aaPredicted RBP22.31■■□□□ 1.16
TPM4-204ENST00000586499 FAM133AQ8N9E0 248 aa22.31■■□□□ 1.16
TPM4-204ENST00000586499 LENG1Q96BZ8 264 aaPredicted RBP22.31■■□□□ 1.16
TPM4-204ENST00000586499 PURBQ96QR8 312 aaKnown RBP22.31■■□□□ 1.16
TPM4-204ENST00000586499 CNPY2Q9Y2B0 182 aa22.31■■□□□ 1.16
TPM4-204ENST00000586499 NR2E3Q9Y5X4 410 aa22.31■■□□□ 1.16
TPM4-204ENST00000586499 DDX49Q9Y6V7 483 aaKnown RBP22.31■■□□□ 1.16
TPM4-204ENST00000586499 SYNGAP1Q96PV0 1343 aa22.31■■□□□ 1.16
TPM4-204ENST00000586499 NSMFQ6X4W1 530 aa22.3■■□□□ 1.16
TPM4-204ENST00000586499 C7orf61Q8IZ16 206 aa22.3■■□□□ 1.16
TPM4-204ENST00000586499 MSL3Q8N5Y2 521 aaKnown RBP22.3■■□□□ 1.16
TPM4-204ENST00000586499 SENP6Q9GZR1 1112 aaPredicted RBP22.3■■□□□ 1.16
TPM4-204ENST00000586499 SENP2Q9HC62 589 aa22.3■■□□□ 1.16
TPM4-204ENST00000586499 CYP39A1Q9NYL5 469 aa22.3■■□□□ 1.16
TPM4-204ENST00000586499 DNM1LO00429 736 aa22.29■■□□□ 1.16
TPM4-204ENST00000586499 NFIBO00712 420 aa22.29■■□□□ 1.16
TPM4-204ENST00000586499 LRRC26Q2I0M4 334 aa22.29■■□□□ 1.16
TPM4-204ENST00000586499 CCDC144CPQ8IYA2 1237 aa22.29■■□□□ 1.16
TPM4-204ENST00000586499 ARRDC4Q8NCT1 418 aa22.29■■□□□ 1.16
TPM4-204ENST00000586499 NCOA7Q8NI08 942 aa22.29■■□□□ 1.16
TPM4-204ENST00000586499 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.29■■□□□ 1.16
TPM4-204ENST00000586499 ZHX1Q9UKY1 873 aaPredicted RBP22.29■■□□□ 1.16
TPM4-204ENST00000586499 COLQQ9Y215 455 aaPredicted RBP22.29■■□□□ 1.16
TPM4-204ENST00000586499 DNAH12Q6ZR08 3092 aa22.29■■□□□ 1.16
TPM4-204ENST00000586499 ASTN1O14525 1302 aa22.29■■□□□ 1.16
TPM4-204ENST00000586499 LRRC41Q15345 812 aa22.28■■□□□ 1.16
TPM4-204ENST00000586499 ARMCX2Q7L311 632 aa22.28■■□□□ 1.16
TPM4-204ENST00000586499 RALYLQ86SE5 291 aaKnown RBP22.28■■□□□ 1.16
TPM4-204ENST00000586499 ADGRF4Q8IZF3 695 aa22.28■■□□□ 1.16
TPM4-204ENST00000586499 PCDH10Q9P2E7 1040 aa22.28■■□□□ 1.16
TPM4-204ENST00000586499 MCM3APO60318 1980 aa22.27■■□□□ 1.16
TPM4-204ENST00000586499 IFIT3O14879 490 aaKnown RBP22.27■■□□□ 1.16
TPM4-204ENST00000586499 PGK1P00558 417 aa22.27■■□□□ 1.16
TPM4-204ENST00000586499 PARP1P09874 1014 aaKnown RBP22.27■■□□□ 1.16
TPM4-204ENST00000586499 RARBP10826 455 aa22.27■■□□□ 1.16
TPM4-204ENST00000586499 AKR1A1P14550 325 aa22.27■■□□□ 1.16
TPM4-204ENST00000586499 ACVR2BQ13705 512 aa22.27■■□□□ 1.16
TPM4-204ENST00000586499 BAATQ14032 418 aaPredicted RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms