RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 WDR93Q6P2C0 686 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 RSBN1LQ6PCB5 846 aaPredicted RBP8.44□□□□□ -1.06
TVP23C-208ENST00000581273 LRRC31Q6UY01 552 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 BRAPQ7Z569 592 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 TAX1BP1Q86VP1 789 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 ANKRD18AQ8IVF6 992 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 NECAB1Q8N987 351 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 CCDC12Q8WUD4 166 aaPredicted RBP8.44□□□□□ -1.06
TVP23C-208ENST00000581273 SHISA4Q96DD7 197 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 ISCA1Q9BUE6 129 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 ZCCHC17Q9NP64 241 aaKnown RBP8.44□□□□□ -1.06
TVP23C-208ENST00000581273 MYOZ2Q9NPC6 264 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 GNL3LQ9NVN8 582 aaKnown RBP8.44□□□□□ -1.06
TVP23C-208ENST00000581273 IQSEC3Q9UPP2 1182 aaPredicted RBP8.44□□□□□ -1.06
TVP23C-208ENST00000581273 PSME4Q14997 1843 aa8.44□□□□□ -1.06
TVP23C-208ENST00000581273 A0A1B0GUA9 196 aa8.43□□□□□ -1.06
TVP23C-208ENST00000581273 TARSL2A2RTX5 802 aaKnown RBP8.43□□□□□ -1.06
TVP23C-208ENST00000581273 VWA3AA6NCI4 1184 aa8.43□□□□□ -1.06
TVP23C-208ENST00000581273 H3BQF6 201 aa8.43□□□□□ -1.06
TVP23C-208ENST00000581273 PES1O00541 588 aaKnown RBP8.43□□□□□ -1.06
TVP23C-208ENST00000581273 OPA1O60313 960 aa8.43□□□□□ -1.06
TVP23C-208ENST00000581273 ZMYND10O75800 440 aa8.43□□□□□ -1.06
TVP23C-208ENST00000581273 USP17L8P0C7I0 530 aa8.43□□□□□ -1.06
TVP23C-208ENST00000581273 SSR1P43307 286 aaKnown RBP8.43□□□□□ -1.06
TVP23C-208ENST00000581273 ZNF280AP59817 542 aaPredicted RBP8.43□□□□□ -1.06
TVP23C-208ENST00000581273 PPFIA1Q13136 1202 aa8.43□□□□□ -1.06
TVP23C-208ENST00000581273 CASP8Q14790 479 aa8.43□□□□□ -1.06
TVP23C-208ENST00000581273 STK38Q15208 465 aa8.43□□□□□ -1.06
TVP23C-208ENST00000581273 SLC9C1Q4G0N8 1177 aa8.43□□□□□ -1.06
TVP23C-208ENST00000581273 RIC3Q7Z5B4 369 aa8.43□□□□□ -1.06
TVP23C-208ENST00000581273 AMOTL1Q8IY63 956 aa8.43□□□□□ -1.06
TVP23C-208ENST00000581273 FMR1NBQ8N0W7 255 aaPredicted RBP8.43□□□□□ -1.06
TVP23C-208ENST00000581273 CNPY4Q8N129 248 aa8.43□□□□□ -1.06
TVP23C-208ENST00000581273 SMARCC2Q8TAQ2 1214 aa8.43□□□□□ -1.06
TVP23C-208ENST00000581273 FAM76AQ8TAV0 307 aa8.43□□□□□ -1.06
TVP23C-208ENST00000581273 PANX2Q96RD6 677 aa8.43□□□□□ -1.06
TVP23C-208ENST00000581273 CRACR2AQ9BSW2 395 aa8.43□□□□□ -1.06
TVP23C-208ENST00000581273 MXD3Q9BW11 206 aa8.43□□□□□ -1.06
TVP23C-208ENST00000581273 GGA2Q9UJY4 613 aa8.43□□□□□ -1.06
TVP23C-208ENST00000581273 TTF2Q9UNY4 1162 aaKnown RBP8.43□□□□□ -1.06
TVP23C-208ENST00000581273 FAN1Q9Y2M0 1017 aa8.43□□□□□ -1.06
TVP23C-208ENST00000581273 IRS2Q9Y4H2 1338 aa8.43□□□□□ -1.06
TVP23C-208ENST00000581273 PNMA6EA0A0J9YXQ4 647 aa8.42□□□□□ -1.06
TVP23C-208ENST00000581273 GOLGA6L7A0A1B0GV03 622 aa8.42□□□□□ -1.06
TVP23C-208ENST00000581273 USP17L3A6NCW0 530 aa8.42□□□□□ -1.06
TVP23C-208ENST00000581273 USP17L4A6NCW7 530 aa8.42□□□□□ -1.06
TVP23C-208ENST00000581273 SRRM3A6NNA2 597 aaPredicted RBP8.42□□□□□ -1.06
TVP23C-208ENST00000581273 GOLGA8KD6RF30 607 aa8.42□□□□□ -1.06
TVP23C-208ENST00000581273 H0YHG0 523 aa8.42□□□□□ -1.06
TVP23C-208ENST00000581273 PFKFB2O60825 505 aa8.42□□□□□ -1.06
TVP23C-208ENST00000581273 SHOX2O60902 331 aaPredicted RBP8.42□□□□□ -1.06
TVP23C-208ENST00000581273 WDHD1O75717 1129 aaPredicted RBP8.42□□□□□ -1.06
TVP23C-208ENST00000581273 OSBPP22059 807 aa8.42□□□□□ -1.06
TVP23C-208ENST00000581273 APBA1Q02410 837 aa8.42□□□□□ -1.06
TVP23C-208ENST00000581273 ST3GAL1Q11201 340 aa8.42□□□□□ -1.06
TVP23C-208ENST00000581273 NBPF9Q3BBW0 867 aa8.42□□□□□ -1.06
TVP23C-208ENST00000581273 TSHZ3Q63HK5 1081 aa8.42□□□□□ -1.06
TVP23C-208ENST00000581273 USP17L1Q7RTZ2 530 aa8.42□□□□□ -1.06
TVP23C-208ENST00000581273 AGBL3Q8NEM8 1001 aa8.42□□□□□ -1.06
TVP23C-208ENST00000581273 NEK1Q96PY6 1258 aa8.42□□□□□ -1.06
TVP23C-208ENST00000581273 MYD88Q99836 296 aa8.42□□□□□ -1.06
TVP23C-208ENST00000581273 HTATIP2Q9BUP3 242 aa8.42□□□□□ -1.06
TVP23C-208ENST00000581273 CFHR5Q9BXR6 569 aa8.42□□□□□ -1.06
TVP23C-208ENST00000581273 VEZTQ9HBM0 779 aa8.42□□□□□ -1.06
TVP23C-208ENST00000581273 SCUBE2Q9NQ36 999 aa8.42□□□□□ -1.06
TVP23C-208ENST00000581273 POLR3EQ9NVU0 708 aa8.42□□□□□ -1.06
TVP23C-208ENST00000581273 BSDC1Q9NW68 430 aaPredicted RBP8.42□□□□□ -1.06
TVP23C-208ENST00000581273 DBF4Q9UBU7 674 aaPredicted RBP8.42□□□□□ -1.06
TVP23C-208ENST00000581273 ZNF609O15014 1411 aa8.42□□□□□ -1.06
TVP23C-208ENST00000581273 HOXB7P09629 217 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 HOXB3P14651 431 aaPredicted RBP8.41□□□□□ -1.06
TVP23C-208ENST00000581273 CMA1P23946 247 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 HNRNPH1P31943 449 aaKnown RBP8.41□□□□□ -1.06
TVP23C-208ENST00000581273 CDR1P51861 262 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 FKBP1BP68106 108 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 IFFO1Q0D2I5 559 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 MTX1Q13505 466 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 CRYMQ14894 314 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 SLMAPQ14BN4 828 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 ZKSCAN8Q15776 578 aaPredicted RBP8.41□□□□□ -1.06
TVP23C-208ENST00000581273 CCDC152Q4G0S7 254 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 SPECC1LQ69YQ0 1117 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 SYNE3Q6ZMZ3 975 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 YTHDF3Q7Z739 585 aaKnown RBP8.41□□□□□ -1.06
TVP23C-208ENST00000581273 PPFIBP1Q86W92 1011 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 ZBTB38Q8NAP3 1195 aaPredicted RBP8.41□□□□□ -1.06
TVP23C-208ENST00000581273 LRRN4CLQ8ND94 238 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 EHBP1Q8NDI1 1231 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 MAFAQ8NHW3 353 aaPredicted RBP8.41□□□□□ -1.06
TVP23C-208ENST00000581273 MAGEC3Q8TD91 643 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 SH3TC2Q8TF17 1288 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 KIFC2Q96AC6 838 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 FAM204AQ9H8W3 233 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 IL1RAPL2Q9NP60 686 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 AKAP2Q9Y2D5 859 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 PCDHGA4Q9Y5G9 962 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 PTCH2Q9Y6C5 1203 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 MYH3P11055 1940 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 TCHHQ07283 1943 aa8.41□□□□□ -1.06
TVP23C-208ENST00000581273 CACNA1GO43497 2377 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms