RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 TRERF1Q96PN7 1200 aa19.52■□□□□ 0.72
SREBF1-219ENST00000580540 TINF2Q9BSI4 451 aa19.52■□□□□ 0.72
SREBF1-219ENST00000580540 RNF146Q9NTX7 359 aa19.52■□□□□ 0.72
SREBF1-219ENST00000580540 DIS3Q9Y2L1 958 aaKnown RBP19.52■□□□□ 0.72
SREBF1-219ENST00000580540 ZNF536O15090 1300 aa19.51■□□□□ 0.71
SREBF1-219ENST00000580540 MSCO60682 206 aa19.51■□□□□ 0.71
SREBF1-219ENST00000580540 IGHA2P01877 340 aa19.51■□□□□ 0.71
SREBF1-219ENST00000580540 MYCNP04198 464 aaPredicted RBP19.51■□□□□ 0.71
SREBF1-219ENST00000580540 GOLGA8HP0CJ92 632 aa19.51■□□□□ 0.71
SREBF1-219ENST00000580540 PNMA1Q8ND90 353 aa19.51■□□□□ 0.71
SREBF1-219ENST00000580540 C11orf49Q9H6J7 331 aa19.51■□□□□ 0.71
SREBF1-219ENST00000580540 ACAD9Q9H845 621 aa19.51■□□□□ 0.71
SREBF1-219ENST00000580540 CCPG1Q9ULG6 757 aa19.51■□□□□ 0.71
SREBF1-219ENST00000580540 TNKSO95271 1327 aa19.51■□□□□ 0.71
SREBF1-219ENST00000580540 H0YGN5 161 aa19.5■□□□□ 0.71
SREBF1-219ENST00000580540 CYP21A2P08686 494 aa19.5■□□□□ 0.71
SREBF1-219ENST00000580540 TAL1P17542 331 aaPredicted RBP19.5■□□□□ 0.71
SREBF1-219ENST00000580540 MNX1P50219 401 aaPredicted RBP19.5■□□□□ 0.71
SREBF1-219ENST00000580540 ZNF543Q08ER8 600 aa19.5■□□□□ 0.71
SREBF1-219ENST00000580540 BTNL9Q6UXG8 535 aa19.5■□□□□ 0.71
SREBF1-219ENST00000580540 ENAHQ8N8S7 591 aaPredicted RBP19.5■□□□□ 0.71
SREBF1-219ENST00000580540 SEPT4O43236 478 aa19.49■□□□□ 0.71
SREBF1-219ENST00000580540 EVI5O60447 810 aa19.49■□□□□ 0.71
SREBF1-219ENST00000580540 TKFCQ3LXA3 575 aa19.49■□□□□ 0.71
SREBF1-219ENST00000580540 CYB5R4Q7L1T6 521 aa19.49■□□□□ 0.71
SREBF1-219ENST00000580540 RANBP17Q9H2T7 1088 aaKnown RBP19.49■□□□□ 0.71
SREBF1-219ENST00000580540 CNPY2Q9Y2B0 182 aa19.49■□□□□ 0.71
SREBF1-219ENST00000580540 RBM8AQ9Y5S9 174 aaKnown RBP19.49■□□□□ 0.71
SREBF1-219ENST00000580540 NR2E3Q9Y5X4 410 aa19.49■□□□□ 0.71
SREBF1-219ENST00000580540 PLXNA1Q9UIW2 1896 aa19.48■□□□□ 0.71
SREBF1-219ENST00000580540 DNAJC25-GNG10A0A024R161 153 aa19.48■□□□□ 0.71
SREBF1-219ENST00000580540 POTEB2H3BUK9 544 aa19.48■□□□□ 0.71
SREBF1-219ENST00000580540 BMP2KLQ5H9B9 411 aa19.48■□□□□ 0.71
SREBF1-219ENST00000580540 MUM1L1Q5H9M0 696 aa19.48■□□□□ 0.71
SREBF1-219ENST00000580540 IFIT1BQ5T764 474 aaKnown RBP19.48■□□□□ 0.71
SREBF1-219ENST00000580540 RALYLQ86SE5 291 aaKnown RBP19.48■□□□□ 0.71
SREBF1-219ENST00000580540 ANKS1AQ92625 1134 aa19.48■□□□□ 0.71
SREBF1-219ENST00000580540 MAP4K1Q92918 833 aa19.48■□□□□ 0.71
SREBF1-219ENST00000580540 ESYT1Q9BSJ8 1104 aa19.48■□□□□ 0.71
SREBF1-219ENST00000580540 UBA5Q9GZZ9 404 aa19.48■□□□□ 0.71
SREBF1-219ENST00000580540 CPVLQ9H3G5 476 aa19.48■□□□□ 0.71
SREBF1-219ENST00000580540 E7EWF7 191 aa19.47■□□□□ 0.71
SREBF1-219ENST00000580540 ICAM1P05362 532 aa19.47■□□□□ 0.71
SREBF1-219ENST00000580540 SNHG28P0DPA3 235 aa19.47■□□□□ 0.71
SREBF1-219ENST00000580540 CNTN2Q02246 1040 aa19.47■□□□□ 0.71
SREBF1-219ENST00000580540 GPATCH4Q5T3I0 446 aaKnown RBP19.47■□□□□ 0.71
SREBF1-219ENST00000580540 NSMFQ6X4W1 530 aa19.47■□□□□ 0.71
SREBF1-219ENST00000580540 A1CFQ9NQ94 594 aaKnown RBP19.47■□□□□ 0.71
SREBF1-219ENST00000580540 ZHX1Q9UKY1 873 aaPredicted RBP19.47■□□□□ 0.71
SREBF1-219ENST00000580540 TAF6LQ9Y6J9 622 aa19.47■□□□□ 0.71
SREBF1-219ENST00000580540 DHX16O60231 1041 aaKnown RBP19.46■□□□□ 0.71
SREBF1-219ENST00000580540 GJC2Q5T442 439 aaPredicted RBP19.46■□□□□ 0.71
SREBF1-219ENST00000580540 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.46■□□□□ 0.71
SREBF1-219ENST00000580540 CHST3Q7LGC8 479 aa19.46■□□□□ 0.71
SREBF1-219ENST00000580540 ARRDC4Q8NCT1 418 aa19.46■□□□□ 0.71
SREBF1-219ENST00000580540 NCOA7Q8NI08 942 aa19.46■□□□□ 0.71
SREBF1-219ENST00000580540 ANO2Q9NQ90 1003 aa19.46■□□□□ 0.71
SREBF1-219ENST00000580540 NRBP1Q9UHY1 535 aa19.46■□□□□ 0.71
SREBF1-219ENST00000580540 ERICH2A1L162 156 aa19.45■□□□□ 0.7
SREBF1-219ENST00000580540 IFIT3O14879 490 aaKnown RBP19.45■□□□□ 0.7
SREBF1-219ENST00000580540 SNAI1O95863 264 aaPredicted RBP19.45■□□□□ 0.7
SREBF1-219ENST00000580540 PARP1P09874 1014 aaKnown RBP19.45■□□□□ 0.7
SREBF1-219ENST00000580540 ZNF865P0CJ78 1059 aaPredicted RBP19.45■□□□□ 0.7
SREBF1-219ENST00000580540 RARBP10826 455 aa19.45■□□□□ 0.7
SREBF1-219ENST00000580540 STOX1Q6ZVD7 989 aa19.45■□□□□ 0.7
SREBF1-219ENST00000580540 C7orf61Q8IZ16 206 aa19.45■□□□□ 0.7
SREBF1-219ENST00000580540 MSL3Q8N5Y2 521 aaKnown RBP19.45■□□□□ 0.7
SREBF1-219ENST00000580540 SENP6Q9GZR1 1112 aaPredicted RBP19.45■□□□□ 0.7
SREBF1-219ENST00000580540 VAT1LQ9HCJ6 419 aa19.45■□□□□ 0.7
SREBF1-219ENST00000580540 PFASO15067 1338 aa19.45■□□□□ 0.7
SREBF1-219ENST00000580540 SYNGAP1Q96PV0 1343 aa19.45■□□□□ 0.7
SREBF1-219ENST00000580540 SEC23AQ15436 765 aa19.44■□□□□ 0.7
SREBF1-219ENST00000580540 ASPRV1Q53RT3 343 aa19.44■□□□□ 0.7
SREBF1-219ENST00000580540 CASC1Q6TDU7 716 aa19.44■□□□□ 0.7
SREBF1-219ENST00000580540 MAMDC4Q6UXC1 1216 aa19.44■□□□□ 0.7
SREBF1-219ENST00000580540 ZNF467Q7Z7K2 595 aaPredicted RBP19.44■□□□□ 0.7
SREBF1-219ENST00000580540 FAM133AQ8N9E0 248 aa19.44■□□□□ 0.7
SREBF1-219ENST00000580540 FGD4Q96M96 766 aa19.44■□□□□ 0.7
SREBF1-219ENST00000580540 LSG1Q9H089 658 aaKnown RBP19.44■□□□□ 0.7
SREBF1-219ENST00000580540 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.44■□□□□ 0.7
SREBF1-219ENST00000580540 SMCHD1A6NHR9 2005 aa19.44■□□□□ 0.7
SREBF1-219ENST00000580540 CEP290O15078 2479 aa19.43■□□□□ 0.7
SREBF1-219ENST00000580540 KBTBD13C9JR72 458 aa19.43■□□□□ 0.7
SREBF1-219ENST00000580540 DNM1LO00429 736 aa19.43■□□□□ 0.7
SREBF1-219ENST00000580540 AKR1A1P14550 325 aa19.43■□□□□ 0.7
SREBF1-219ENST00000580540 SART3Q15020 963 aaKnown RBP19.43■□□□□ 0.7
SREBF1-219ENST00000580540 USH1GQ495M9 461 aa19.43■□□□□ 0.7
SREBF1-219ENST00000580540 ARMCX2Q7L311 632 aa19.43■□□□□ 0.7
SREBF1-219ENST00000580540 CCDC144CPQ8IYA2 1237 aa19.43■□□□□ 0.7
SREBF1-219ENST00000580540 XPNPEP3Q9NQH7 507 aa19.43■□□□□ 0.7
SREBF1-219ENST00000580540 CYP39A1Q9NYL5 469 aa19.43■□□□□ 0.7
SREBF1-219ENST00000580540 FRMPD3Q5JV73 1810 aa19.42■□□□□ 0.7
SREBF1-219ENST00000580540 PTPDC1A2A3K4 754 aa19.42■□□□□ 0.7
SREBF1-219ENST00000580540 SOWAHBA6NEL2 793 aa19.42■□□□□ 0.7
SREBF1-219ENST00000580540 NFIBO00712 420 aa19.42■□□□□ 0.7
SREBF1-219ENST00000580540 COL6A1P12109 1028 aa19.42■□□□□ 0.7
SREBF1-219ENST00000580540 ATN1P54259 1190 aaPredicted RBP19.42■□□□□ 0.7
SREBF1-219ENST00000580540 ACVR2BQ13705 512 aa19.42■□□□□ 0.7
SREBF1-219ENST00000580540 BAATQ14032 418 aaPredicted RBP19.42■□□□□ 0.7
SREBF1-219ENST00000580540 WTAPQ15007 396 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms